Polypterus senegalus (gray bichir): 120537093
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Entry
120537093 CDS
T08668
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120537093 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120537093 (atrx)
03036 Chromosome and associated proteins [BR:
psex03036
]
120537093 (atrx)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120537093 (atrx)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120537093 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
NorB_cytochrome_c-like
Motif
Other DBs
NCBI-GeneID:
120537093
NCBI-ProteinID:
XP_039621677
LinkDB
All DBs
Position
10:38176472..38529299
Genome browser
AA seq
2220 aa
AA seq
DB search
MTAEPKSKSKLNTLVEKLHEYLAYSSEESEDSPTSGRYLGKDFTGNKLHKKDQIMEEPGS
SCEKLKSSSSRSKRKPSVVTKYVESDISNESGHENTSNDNTSENNLDVNRLPKGTIVVQP
EPVSNEIKDDFRGPEFRSRPTKPKPDISKKRGDESLHGIVSCTACGQQVNHFQKDTIFQH
PALKVLICKTCYKYYMSDDISKDADGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLG
RKELSSIMEENSKWYCYVCSPEPLLDLVAACDSVIENLEQFWQQNRKKSKVDSEKSNRDE
HTHKHSLKDKVACNGKENVSDNMGSGTTTFSYKALKVPKELIKKTKKLVETTTGLNTTFV
KFLQQETETGPLNKMRLRHLKAFKSVLSDLKKAHSALEEALEKELRELELSNGEDIDCDL
NNGDLKVLKGEKDVSSSENNAEHFSKVTTDNGVIDILEVDNNGANSCSLIDHCQNDSTIK
IHVGEANFVGEDKHKSLDGVLDRSAEEPVIFDSSDAEEDNINSDNDGGVPDPGDVSKSKN
DGQEAGKKEHKNGEKVISTVGSDDKEESVNASESSLDKDILTVPSSVPDELFEAADSFME
ARSKITDGDENSFSNSKRATKFSDSKRKTLRKHSVERRSSSKVEAPIKVTKELVVKLTPV
SISDTSCCKPMKGRNEFDSDKSEESSSEKSENMCDEENEEVLPQDDGLECRRSPRVKTTP
LRRPTDSTKLSSQTEDHSDSESDDEKPEFPVKSKPKSSSKLKEVSLNASQNITVSQAPTS
AKDLDLSDSDEVPEILKRSAEMCPSSPEVDSNVDSPKSVKRKCLFNIKKSTPQSKDKKAT
KRKMKNSSESDPDVQKTTTKPEKCTKKKRQNNSDSSNYDSDLEKKIKNFSKLEAVKKGSR
RTKKLVKNVKKEEEKEGENQLSEKTIPKEKKKIRSKERQIKKTVSESDTSSSEEDKPKQA
DYKEVGEEDSSDEQKIKPITENVIGSLQKEFCQSSGDEAVIKTGPVSGAEDDDDDDPENR
IAKKMILAQIKANLSSEDDGSTDEEESEKEDNGKNEKSKTGVEDVKEEVSDTGSESDFEM
TKKRRFRHRLLRKKLSMSEGESGEEKQPREKNENLKKSRKKVSSDDSADSDFEESGISEV
VSDSDGDEDKRPRTRAAKKAGAEENQRSYQQKKKRRRIKVQEDSSSNAQSNSEEENEGGD
EEEDDSKSPGKGRKKIRKILKVDKLRSETQNALKEEEERRKRIAEREQLREKLREVIVVE
EASQVQCPITTKLVLDEDEKTKDPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESVQKTKQ
YQGSGCILAHCMGLGKTLQVVTFLHTVLLCEKLDFSTALVVCPLNTALNWLNEFEKWQEG
LKDEEMLEVCELATVKRPQERSYMLQRWHEDGGVMIIGYEMYRNLTQGRNVKSKKLKEIF
HKTLVDPGPDFVICDEGHILKNEASAISKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNF
IKENLLGSVKEFRNRFINPIQNGQCADSTPTDVRVMKKRAHILYEMLAGCVQRRDYTALT
KFLPPKHEYVLAVRMTPVQCKLYRYYLEHFTGVTNNVDGGRGRAGAKLFQDFQMLSRIWT
HPWCLQLDYISKENKGYFDEDSMEEFIASDTEESSMSLSSEEEEVKSKKKKKCKKQKSSS
SNDDNGSDNDLEVIKVWNSRSRGGADKMDNERNKQPDPPKEEEGNKSSASSAPGSPSPDW
HKEFVTEADSEVLEHSGKVVLLFEILRMAEEVGDKVLVFSQSLISLDLVEDFLELANRAK
AEEKPEIYKGDGKWFRNIDYYRLDGSTNAITRKKWAEDFNDISNTRGRLFLISTRAGSLG
INLVAANRVIIFDASWNPSYDVQSIFRVYRFGQTKQVYVYRFLAQGTMEEKIYDRQVAKQ
SLSFRVVDQQQIERHFTMNELTELYTFEPDQLDDPNSEKKSKRATPMLPKDPFLAELLHN
HKEEIVGYHEHDSLLDHKEEEALTEEERKAAWAEYEAEKKGLSLRTGVNPGVNYSPFTIG
APTTYFPFNVAALAAMSNQQLEDLINQGREKVVEASNQITSVTRESFEDIISSVWKENPN
LTEAQVQSMALGRQASIELELKRREAVYRDVLTKQQTLIMYVQKVLSNRKIQEQHLAMQR
AQLLNRMGLQKGQLGAYNQMEMLGLYQQALGGAMQPPSLQNMSAALNQMRSKNPGPSQGN
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagagcctaaaagtaagagcaagttgaatacattagtggaaaaacttcatgaa
tatttagcttattcatcagaagaatctgaagattctccaacttcaggcaggtatcttggt
aaagatttcactggaaataaattgcacaaaaaggaccaaatcatggaagagcctggtagc
tcctgtgaaaagttgaagtcctcctcttcccgttcaaagaggaaaccttctgtagtaaca
aaatatgttgagtctgatatttcaaatgaaagtggtcatgaaaacacctccaatgataat
acttctgagaataatttggatgttaacaggttgccaaaaggaactattgttgtccaacct
gagccagtatcaaatgaaattaaagatgattttagaggtcccgagtttaggagtcgacca
acaaaacctaaaccagacatttctaaaaagagaggagatgaaagcttgcatggcattgtt
agctgtacagcttgtggacagcaagttaatcattttcaaaaggacaccatttttcaacat
cctgcacttaaagttcttatttgtaagacatgttacaagtactacatgagtgatgatata
agtaaagatgcagatggcatggatgaacaatgcaggtggtgtgctgaaggaggaaattta
atttgttgcgacttttgccacaatgcattctgcaaaaaatgtattttgcgtaatcttggt
aggaaagaactctctagtataatggaggaaaatagtaaatggtactgttacgtttgtagt
cctgaaccattactggaccttgttgctgcatgtgacagtgtgatagaaaatctggaacag
ttttggcaacagaaccggaagaagtcaaaagtagacagtgaaaagtctaatcgtgatgag
catacacacaaacattcacttaaagacaaagtggcatgtaacggaaaggaaaatgtatct
gataatatgggttcaggcactacaacgttttcgtacaaagcactaaaggtacccaaagaa
ttaataaaaaagacaaaaaaactggttgaaactacaactggtttgaatactacatttgtg
aaatttttacagcaagaaactgaaactggtccattgaataaaatgaggttaagacattta
aaagcctttaaatcagtattgtcagaccttaaaaaagctcattctgctttagaagaagca
ttggagaaagagcttagagaattagagctttcaaatggggaggacattgattgtgatcta
aacaatggagacttaaaggttcttaaaggggaaaaagatgtcagttcttctgaaaataat
gctgagcatttttccaaggttactacagacaatggagttattgatatattagaagtcgac
aacaatggcgcaaactcttgttcactgatcgatcattgtcagaatgatagcactataaaa
attcatgttggagaggccaactttgttggggaagacaaacataaatctctggatggtgta
ttagatagatcagctgaggaaccagtaatttttgattcatcagatgcagaagaggacaat
attaatagtgacaatgatggtggagtgccagatccaggtgatgtttctaagagtaaaaat
gatggacaagaagctggtaaaaaagaacataaaaatggagaaaaagtgatatctacagtt
ggctcagatgataaagaggaatctgtaaatgcctctgagtcatcgttggataaagatatt
ttaactgttccttcatcagttcctgatgaactctttgaagctgctgattcttttatggaa
gcacgtagtaaaataacagatggagatgaaaatagtttttcaaactcaaaaagagctaca
aaatttagtgactcgaaaagaaaaaccttgagaaaacattctgttgagagaaggtcatct
tctaaagttgaagcacccattaaagtaacaaaggaacttgtggtgaagttaactcctgtt
tcaatatctgatacttcctgctgtaagccaatgaaaggcagaaatgaatttgatagtgat
aaaagtgaagaaagcagtagtgaaaaatctgagaacatgtgtgatgaagagaatgaagaa
gtgctgcctcaggatgatggattagaatgcaggcgttctccacgtgtaaagacaacacct
cttagaagaccaaccgacagtactaaactttcatctcaaacagaagatcatagtgacagt
gaatcggatgatgaaaagcctgaatttccagttaaaagcaagccaaagtcttcaagtaaa
cttaaagaggtttcactaaatgcaagtcaaaacattactgtttcacaagcacctacttct
gcaaaagatttagatctttcagattccgatgaagtgcctgagattttgaaaaggtcagca
gaaatgtgtccatcttcacccgaagtggatagcaatgtagattctccaaaaagtgttaaa
aggaaatgtttgtttaatatcaagaaaagtactccccagtccaaagataaaaaagctaca
aaaagaaaaatgaagaactcatcagaatctgatcctgatgtgcaaaagactactacaaaa
cctgaaaaatgcacaaagaaaaaaagacaaaataactctgattcttctaattatgattct
gaccttgaaaaaaaaataaaaaattttagcaaattagaagcggtgaaaaagggaagtcgc
agaactaaaaaacttgtaaagaatgttaaaaaagaggaagaaaaagagggagaaaatcag
ctttctgaaaagactattcctaaagaaaagaaaaaaatcagatcaaaagaaagacaaata
aaaaaaacagtttcggagtcagacacttcttcaagtgaagaggataaacctaaacaagca
gattacaaagaggttggggaagaggatagtagtgatgaacagaagattaagccaataact
gaaaatgtaattggttcactgcagaaggaattttgtcaatcatcaggcgatgaagcagtg
attaaaacgggtcctgtttcaggagctgaagatgatgatgatgatgatcctgagaataga
attgcaaaaaaaatgattttggcacagatcaaagcaaacttatcttcagaggatgatgga
tcaacagatgaagaagaatctgaaaaagaagataatggtaaaaatgagaaaagcaagaca
ggtgttgaggatgtaaaagaggaagtgtctgacactggatctgaatctgactttgaaatg
acaaagaaacgccgatttcgacatcgtcttctgcgaaaaaagctctccatgagtgaaggt
gaatctggagaagagaagcagccaagagagaaaaatgaaaacctgaagaagtcaagaaag
aaagtgagtagtgatgattctgcagattctgattttgaggagtctggcataagtgaagtg
gtttctgattctgatggtgatgaagacaaacgacctagaacaagagctgcaaagaaagca
ggggctgaagaaaatcagcgcagttatcagcagaagaagaaaaggagacgtattaaagtt
caggaggactcttcaagcaatgctcagagtaattcagaggaggagaatgaaggtggtgat
gaagaggaagatgattcaaagtctcctggaaagggtcgcaagaaaattcgtaaaattctt
aaagtggacaaactaaggtctgaaacacaaaatgctcttaaggaagaagaagaaaggaga
aaacgtattgcggaacgtgagcaattaagagagaagttgcgagaggtaattgtagttgaa
gaagcatcccaagtccagtgccctattactaccaagcttgtattagatgaagatgagaaa
accaaggaccctcttgtgcaggttcacaggaatatggtaacaaaactgaagccacatcaa
gttgatggtgttcaatttatgtgggattgctgctgtgaatctgtgcagaaaaccaaacag
taccaaggttcaggttgtattctggcacactgtatgggtctaggcaagacactgcaggta
gtaacttttctacatacagttttgctctgcgaaaaactagatttcagtaccgctctggtg
gtgtgtcctttaaatacagcacttaactggttgaatgaatttgagaagtggcaggaaggt
ttgaaagatgaagaaatgttagaggtgtgtgaacttgctacagtgaagcgaccccaagaa
agatcatatatgttgcagcgttggcatgaagatggaggcgtaatgataattggttatgaa
atgtatcgaaatctgacacaaggccggaatgttaagagcaaaaagctaaaagaaattttt
cacaaaactctggttgatccaggtcctgactttgttatatgtgatgaaggacacatttta
aaaaatgaagcatctgccatttccaaggcaatgaattccataaagacacgaagaagagtt
gttttaacagggactccactgcagaataatcttattgaataccactgtatggtgaatttc
atcaaggaaaacctgttgggctctgttaaagagtttagaaatcgatttatcaaccccatt
caaaatggacagtgtgctgattccacccctactgacgtgagagtaatgaagaaacgtgcc
cacattctgtatgaaatgttagcaggatgtgttcagagaagagactacactgctttgaca
aagtttttaccgccaaagcatgagtatgttctggcagtgagaatgactccggtacagtgc
aaactatatcgatactacttggagcacttcacaggtgttacaaacaatgtcgatggaggc
agaggcagagcaggagctaaattattccaagatttccaaatgctaagcagaatatggaca
catccttggtgcctgcagctggactatataagcaaggaaaataagggatactttgatgag
gacagtatggaagagttcattgcttcagatactgaagaatcatcaatgagtttaagttca
gaagaggaagaagttaaaagcaagaagaaaaagaagtgtaagaaacaaaagtcctccagc
tctaatgatgataatggtagtgataatgatctagaagtgatcaaagtatggaattcccgt
tcacgtggtggtgcagataagatggataatgagagaaataaacaacctgaccctccaaaa
gaagaagaaggaaataaatcttctgcaagctcagcaccgggaagtccttctcctgactgg
cacaaagagtttgttactgaggcagactctgaagtgctagaacactctgggaaagttgta
ttgctgtttgaaattcttcgtatggctgaagaagttggagataaagtccttgtgttcagt
cagtcattgatttccttggacttagtagaagattttcttgagctggcaaacagagctaaa
gcagaagagaagcctgaaatttacaaaggtgatggaaaatggtttagaaatattgattac
tatcgtcttgatggctcaacaaatgcaataacaagaaaaaagtgggctgaagattttaac
gatatcagcaacaccaggggacgtttgtttctgatttctactagagctggatctctagga
ataaatcttgttgctgctaacagagttattatttttgatgcctcttggaatccatcttac
gacgttcagagtatttttagagtatatcgttttggccaaactaagcaagtgtatgtgtac
cggtttctggctcagggaactatggaagaaaagatctatgacagacaggttgcaaagcag
tcactctctttccgggttgtggatcagcaacagattgagcgtcactttacaatgaatgaa
ctcactgagctgtatacttttgaacctgaccaacttgatgatcctaactctgaaaagaag
agcaaaagagccactccaatgctccccaaggatcctttcctagcagaacttcttcacaac
cataaagaagagatagtaggttatcatgagcatgattcacttcttgatcacaaagaagag
gaagcacttactgaagaagagcgcaaagcagcttgggccgaatatgaagcagagaagaaa
gggttgtccttgcgaacaggtgtaaatcctggagtaaattattccccttttactattggt
gctcctactacatatttcccattcaatgttgcagcattagctgcaatgagcaaccagcag
ctagaggatcttattaaccaaggcagagagaaagttgttgaagcaagcaatcagattact
tcagttacaagagaatcatttgaagatatcatatcatctgtgtggaaagaaaatccaaat
ctgactgaggctcaagtacagtctatggccttaggtcgccaagcaagcattgaactggag
ttgaagcgccgtgaagctgtatacagagacgtgttaactaaacagcagacgttaataatg
tatgttcaaaaggtgctatcgaataggaagatccaggagcagcatctggcaatgcaaaga
gcccagctgttgaaccgcatgggtttacagaaaggacaattgggagcttacaatcaaatg
gagatgctgggattgtatcaacaagccctggggggtgcaatgcagcccccttctttgcag
aatatgtcagctgctttaaaccagatgagaagcaaaaaccccggaccatctcaaggaaac
tag
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integrated database retrieval system
