Polypterus senegalus (gray bichir): 120537098
Help
Entry
120537098 CDS
T08668
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120537098 (rlim)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120537098 (rlim)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120537098 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
120537098
NCBI-ProteinID:
XP_039621687
LinkDB
All DBs
Position
10:complement(40020475..40095097)
Genome browser
AA seq
603 aa
AA seq
DB search
MENTADNGDSTEQGSNEQSEVQRQHQNDRLDREEDFYHFVNNLSEEDYRLMRDNNLLGTP
GEVTKEELLRRLLQVKEGPEQVNQSEIGAEENRGPETPDDGSNGDSILDWLNSVRQTGNT
TRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNIAEQQMRAEGEMTERSETEQPMEVS
THLTETTNVENADVDSESPGPSDADRVQEVSEPQTPHDQTTQRGVRRARSRSPEQRVTRP
RNDRSCSPSSRDNDQLHSSPQTSSVESQNLENLVEPHTEESSSVAQNLHSRPSLTESDAD
LQNSTRQDSSVLSEPSQENNSGIQASGDTNAAGRRPPTIMLDLQVRRVRPGEYRQRDSIA
SRTRSRSQTANNTFTYESEQGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLSEATSM
ALQTMIRQIMTGFGELSYFMDSDSDSDSNRGPNIDLPNVGGSLSPENVELQTQEDRRNDA
SLQSGAGGESRESRVPNSAEDAGSLPFLRLAHFFLLNDDDEDHPRGLTKEQIDNLSTRSF
GESDGLKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSGNRE
SVV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacagctgataatggagacagtactgaacaaggaagcaatgaacagtcggaa
gttcagcgacagcatcagaatgatcgcttggatcgtgaagaggacttctatcactttgtc
aacaacttgagtgaagaggattacaggctgatgagagacaataatttgctgggcacccct
ggtgaagttaccaaagaagagttacttcgtcgccttctgcaggtgaaggaggggccagaa
caggttaatcagagtgaaatcggggcagaagaaaatcgtggtcctgaaaccccagatgat
ggttcaaatggtgattcgattcttgattggttgaactctgtgagacaaactggaaacaca
acaagaagtggccaacgaggaaaccagtcatggcgggcagtgagccgcactaatcccaac
agtggagattttagatttagtttggaaatcaatgtaaaccgtaatattgcagagcagcaa
atgagagcagaaggagaaatgacagagaggtcagaaactgagcaacctatggaggtttct
acacatcttactgagacaacaaatgtagaaaatgctgatgtagattctgaaagtcctggc
ccttcagatgctgacagagtacaggaagtctcagaaccacaaactccccatgaccaaact
actcaaagaggtgtcagacgggcaagaagccgtagtccagagcaaagagtaacaagacca
agaaatgacaggagttgctcaccatcatctcgggataatgatcaactgcatagttctccc
cagaccagttcagttgaaagtcagaatctagaaaaccttgtcgaaccacatactgaagaa
tccagctctgtagcacagaatttgcattcaaggccaagtctaactgaatctgatgctgat
ttacaaaattctacaagacaggactcctctgttctttctgaaccatctcaagaaaataat
tctggcattcaggcaagtggtgatactaatgctgcagggaggagaccacctactatcatg
ctggatcttcaagtacggagagtacggcctggagaatacagacagagagatagcatagct
agcagaaccaggtcccggtctcaaactgccaacaatacctttacatatgaaagtgaacaa
ggtggtttccggcgtactttctcacgatctgagagagccggtgtacgcacttacgttagc
accattcgtattccaatcagacggatatctgatgcaggactaagtgaagctacctcaatg
gcattgcaaactatgatcaggcaaataatgactggatttggggaacttagctactttatg
gacagtgacagtgactcagattcaaacagaggacccaacattgatttaccaaatgttggt
ggcagtttaagtcctgaaaatgttgaattgcaaacccaggaagatcggaggaatgacgca
agtttacagtctggggctggaggagagagccgtgaaagcagagttccaaatagtgctgag
gatgctgggtccttgccttttcttaggctagcacacttctttcttttaaatgatgatgat
gaagaccatcctaggggacttactaaagaacaaattgacaatctttctacccgaagtttt
ggggaaagtgatggtcttaaaacatgtagtgtgtgtattacagagtatgcagaaggaaat
aagcttcgcaagcttccatgttctcatgaataccatgttcactgcattgatcgttggctt
tctgaaaattccacttgtcccatttgccgtagggcagtactggtttcaggcaaccgagag
agtgtcgtctag
DBGET
integrated database retrieval system
