Polypterus senegalus (gray bichir): 120537397
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Entry
120537397 CDS
T08668
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120537397 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
120537397 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120537397 (thoc2)
03041 Spliceosome [BR:
psex03041
]
120537397 (thoc2)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120537397 (thoc2)
Spliceosome [BR:
psex03041
]
Complex C
Other components
EJC/TREX
120537397 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120537397 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
120537397
NCBI-ProteinID:
XP_039622242
LinkDB
All DBs
Position
10:complement(107909535..108043425)
Genome browser
AA seq
1577 aa
AA seq
DB search
MAALVFPADWMRNWEKSGRSEFLQLCRNLSESKPSDNVALRDIQAAFYELTWHCIKGNLK
LEQVAAVLTDVMELREDMSSVLADVFCILDIETSCLEEKNKRDHFTQLVGACLCLVSDTV
LKERLDPETLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQD
LSGNITSELILESIKSLIGCFNLDPNRVLDIILEVYECRSDQDEFFIPLIKSYMCEPQTL
CHILGFKFKFYQEPNGETPLSLYHVAAALLQQHLIDLEDLYVHLLPADSSILEEHKREIM
EAKQIARKLTMVVVPSEKTEEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWQHAQTIMD
QMPPFYATSHKSIALALCQLIHIIIEPLYRRAGVPKGAKGATICPLKNKKAPKPVETFEE
LRKEVFIMLCYLGPHLSHDPILFAKIVRLGKGFMKESDNKQDDKGKIETLLSCFLSISDQ
VLLPSLTLMDCNACMSEELWGLFKMFPYQHRYRLYGQWKNETYNSHPLLVKVKAQTVDRA
KYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIMPVVDSLKYLTSLNY
DVLAYCIIEALANPEKEKMKHDDTTISAWLQSLASLCGSVLRKYPIELAGILQYVANQLK
AGKSFDLLILKEVVQKMAGIEITDEMTTEQLEAMTGGEQLKAEGAYFGQIRNTKKSSQRL
KDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLS
TEDYIKRVPSVDVLCKEFHTPHDAAFFLSRPMYAHQILSKYDELKKIEKGNRQQQKVQKY
ITACECVMSPVHEAVVSLHPPKVWDDISPQFYSTFWSLTMYDLAVPQNAYDREVNKLKAQ
MKAIEESLEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLHRLKLEKDNWLLAKST
KNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIYTVA
SCTENEARRYGRFLCCMLETVTRWHSDKTIYEKECGNYPGFLTILRATGFDGGNKADQLD
YENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILLWYPKVLNLGQALERRVH
KICQEEKEKRPDLYALAMGYSGQLKSRKPFMVPENEFHHKEQPMRSSGPGAIQNGPGSTG
KPAVPPIVTSKPDDGTSEESEKSKEKSLSSVKTPNKTNNAAPKCPTSNGSTVANSSKIIK
DKEDKDKSGKEKNKEKKEKTPAATPEAKVPGKEKQKEDRSVKEEKARDIKEKTPKTEKEK
EKLKKEEKPSAKTISANLEIKSSAEKEREMEQLKDREVAKEIKMKESSKGEKATMAGSLK
SPVPRSESSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDTAAKQYYTNHSIAPLSKSK
EKEMDKKEMEKPRDRSREREKKDDKDRKERKRDHSNSDREMSQELKRRKDENGTGSSKHS
KSESPSDSPHSSEKERDKSKSSKSSSKEKSDSTKLDKSSSGKKESRHDKEKAEKKEKRES
SGMKEEKKHHKSSDKHR
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttggtgttccctgctgattggatgagaaactgggaaaaatcggggcgcagt
gaatttttacagttatgtcggaatctttcagaaagtaagcccagtgataatgtagcacta
agggatatccaagcagccttttatgaacttacatggcactgcattaaaggaaacctcaaa
cttgagcaggttgcagcagtactaactgatgtaatggaattacgagaggatatgtcatcc
gttttagcagatgtgttctgcattttagatatagaaaccagttgtttagaagaaaaaaac
aaacgcgatcactttacccagttggttggagcatgtttgtgcttggtatcagacacagtt
cttaaagaacgtttggatccagagacgttagaatcccttggactcatcaaacaagctcag
cagtttaaccaaaaaattgtgaaaatcaagacaaagctattttataaacagcagaagttt
aacttgctgagagaagagaatgaaggatatgccaaattaataacagagcttggacaggac
ctttctgggaacatcaccagtgaattaatcttggagagcatcaaatcattaataggatgc
tttaatttggatccaaatcgggtactggatattattttggaggtatatgaatgtagatca
gatcaagatgaattcttcatacctctcataaaatcttacatgtgtgaaccacaaacactg
tgtcatattttaggatttaagttcaaattttaccaggagcctaacggggaaactccctta
tcactttatcatgtggctgcagcgctgctgcaacagcacttaattgacctggaagatctc
tatgtacatcttcttcctgctgattcaagtatattggaagaacacaaacgggagatcatg
gaggcaaaacagattgcacgaaaacttacaatggttgtggttccttcagaaaagacagag
gagaaggaaaaagaaaaggaagaagaaaagaatgagaagccaccagacaaccaaaagctt
ggactcctagaagcattacttaggattggtgactggcaacatgcacagaccattatggac
cagatgcctccattttatgctacatcacataaatctatagcacttgcattgtgccagctt
attcatataatcattgaacctttgtaccgaagagctggagtgcctaagggtgcaaaagga
gccaccatttgccctcttaaaaataagaaagctccaaaaccagttgagacatttgaagag
ttgaggaaagaggttttcatcatgttgtgttaccttggtcctcatctttctcatgatcct
attttatttgcaaagattgttcgtttaggaaaaggcttcatgaaggagagtgacaacaaa
caagatgacaaaggaaaaatagagaccttgctgagctgttttctcagtatttctgaccag
gttttgctcccatctctgacgctaatggattgtaatgcctgcatgtctgaagagctttgg
gggctcttcaaaatgttcccttaccagcacaggtatcgtttatacggacagtggaaaaat
gaaacttacaatagccacccgcttcttgtgaaagtgaaagcccagactgttgaccgagcc
aaatatattatgaagcgactgactaaggaaaatgtgaagccttctggaaggcagatagga
aaactgagccatagcaacccaacaattttgtttgattatatgctctctcagatccaatgg
tatgacaaccttattatgccagttgtagattctctgaagtacctcacatctctaaattat
gatgttttggcttattgtattattgaggcactggcaaatccagagaaagaaaagatgaaa
catgatgacaccacaatatctgcctggttgcagagtcttgctagtctttgtggttcagtc
ttaaggaaatacccaattgaactagcagggatactacagtatgtagcaaaccagttgaaa
gcagggaagagttttgatctgctgattctcaaggaagtggtgcaaaagatggcaggcatt
gagattacagatgagatgacaacagaacaattggaagctatgacaggcggggaacagctg
aaggccgagggagcatattttggtcagatccggaatacaaaaaagtcctctcaaagacta
aaagatgcccttttggatcatgaacttgcattacccctttgcttactaatggcccagcag
aggaacggagttgtctttttagaaggtggagagaagcatttgaagctcgttggaaaactg
tatgatcagtgccatgacactctggtgcagtttggtggatttttggcttctaatctcagc
acagaagattacattaagcgtgtcccctctgtagatgtcctttgcaaagagtttcacaca
cctcatgatgcagctttcttcctctctcggcctatgtatgcacatcaaatactgtcaaaa
tatgatgagctgaaaaagattgaaaagggaaaccggcagcagcagaaggttcaaaaatac
atcacagcgtgtgaatgtgtgatgagtccagtccatgaagcagttgtttcactgcatcca
cccaaagtctgggatgatatcagtccccagttctactccaccttctggtcacttactatg
tacgatcttgctgtgccacaaaatgcctatgacagggaggtcaacaaacttaaggctcag
atgaaagctattgaagaaagtttagaaatgccaccaaataaaaaaaagaaggaaaaggag
cgttgcacagctctacaggataaattgctggaggaagaaaagaagcagttggagcatgtc
cagcgagttctgcacagacttaaactggagaaggacaactggcttttagcaaaatccaca
aagaatgaaacaataacaaagttcttgcaactctgtatttttccacgctgcatcttctct
gccattgatgctgtatactgtgcacgctttgttgaactggtccaccaacagaaaactcca
aatttttgcacactactgtgttatgacagggtgttttcagatattatttatacggtggca
agctgcacagaaaatgaggcaagacgatacgggcgcttcctctgctgcatgctagaaacg
gtcactcggtggcatagtgacaagaccatttatgagaaggaatgtggcaattaccctggc
tttctgacaattttgcgtgctactggttttgatggaggaaacaaggcagaccagctggat
tatgaaaatttccgacatgtggtgcacaagtggcattacaaactaacaaaagcttcagtg
cattgtctagaaactggagaatacacccatatccggaatattctcattgttctgaccaag
atcctgttgtggtacccaaaagtattaaaccttggccaagcactggagcgcagggtgcac
aagatctgtcaggaggagaaggagaagaggcctgatctttatgcattggcaatgggctac
tccggacagctgaaaagcaggaaaccatttatggtccctgaaaatgagtttcaccacaag
gagcagcccatgaggagcagtggtcctggtgcaatacagaatggcccgggtagtactggc
aaaccagcagttcctcctattgtcaccagcaaaccagatgatggaacttctgaagagtca
gaaaaatctaaagagaagagtctaagttcagtgaaaactccaaacaaaaccaacaatgca
gcccccaagtgtccaactagcaatggaagcactgttgctaacagctctaagattatcaag
gacaaggaagataaagacaaaagtggaaaggaaaaaaacaaagagaagaaggaaaaaaca
ccagctgccactccagaggccaaagtaccaggaaaagaaaagcagaaggaagaccggtca
gtgaaagaggagaaggctcgtgatatcaaggaaaaaacacctaaaacagaaaaggaaaag
gagaagctcaagaaagaagagaagccctcagccaagaccatcagtgccaatttggagatt
aagtcttctgctgagaaggagagagaaatggagcagctgaaagacagagaggttgcaaag
gaaataaaaatgaaggagagcagcaaaggagagaaggcaactatggctgggtccttgaag
tcacctgttccccgttcagagtcttctgagtctgagagggaacaaaagcgacgtaaagtt
gatacccactcttcaccatcacattcctccactgttaaggacaatctcaacgaactcaag
gatactgcagctaagcagtactacaccaaccacagcatagcaccattatccaaaagcaaa
gaaaaggaaatggataagaaagaaatggagaaacccagggatcgatcaagagaaagggaa
aagaaggatgacaaagataggaaagaacgaaaaagagaccattcaaacagtgaccgagaa
atgagtcaagaattaaaaaggcggaaagatgaaaatggaacaggctcatcaaaacacagc
aagagtgaaagtccatctgattcaccacattccagtgaaaaagaaagagataagagcaaa
agcagcaagtcttctagtaaagagaaaagcgattcaacaaaactggataagagttcatct
ggtaaaaaggagtcaaggcacgataaagaaaaagctgaaaaaaaagagaagagagagagc
tctgggatgaaggaagagaaaaaacaccataaatcatcagataagcatagataa
DBGET
integrated database retrieval system
