Polypterus senegalus (gray bichir): 120537415
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Entry
120537415 CDS
T08668
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120537415 (zc3h12b)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120537415 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH_4
PM2_P3
UBA_N4BP1_C
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
120537415
NCBI-ProteinID:
XP_039622271
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All DBs
Position
10:111946210..112024710
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AA seq
945 aa
AA seq
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MVVELWAPASAGPLLQRSIPHIERVFRVRVGQGPAEPGGGGIAVSVREGDEGDRSRARDY
ITSLISPEHKKKEHLTLFLRRRLLSLKSLIEYDSQAVVEIKENTVEISGGEHNVMTAWSM
VEKLKMEKASRGEGSILQEVADCSGESEDGSSSESETEQAASHSTEPQISNKPHRQLCRS
PCLDRPSFSQSSILQDTQAASLDKDYQVKMDFALKLGYSMEQIQTVLNKLGPSALINDIL
AELVRLGNKGDVDTPSSTSSGTSTLVARVPCTKEITSPEASLEEEAMDNLDNLRPIVIDG
SNVAMSHGNKEVFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPITDQEILRKL
EKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSDGIIVSNDNYRDLQNEKPEWKKFIEE
RLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCPYGKKCTYGHKCKYYH
PERANQPQRSVADELRAFAKLSAVKTMSEGALAKCGSGPITTKGDSSSEVKRIAPKRQSD
PSIRSVACELEERLSVARKSEANSVPSLVTALSVPTMQPSKSHAAGALNTRSASSPVPGS
SQFSHQGSSLEHMSSVQYPPILVTNSHGTSISYSEQYPKYDPGADHGYYSMLNEFSNLSL
NSMHNTDNFYSMEHELGLYSRNPSPCPDACAGHSSSEPYSSYSDLYLSSVDSAAEDGAKN
TPSSSQNRLQPFAHSFHEALTRVQSYGPEEPKQTPRKQSVSHLAPHVQHPVVGARSSCPG
DYPIPQNIHPSASSQPGRALGMTRMDSISDSRLYESNPMRQRRPPLCREQHASWDPLPCG
GSDSYGYHTSYPLSNSLMQPCYERVMVRSMPEKMEQIWRSPWEGGASAAEPQERYVIPEH
QYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQQLAAVIVTELRSGR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggagctgtgggcgccggcgagtgcaggccccctgctgcagcgctccatcccg
cacatcgagcgagtgttccgggtgcgagtgggccagggccccgcggagccaggcggcggg
ggcatcgcggtgagcgtgcgggaaggcgacgagggcgaccgcagccgggccagagattat
attacatccctcatctccccggaacacaagaaaaaggagcacttgacacttttcttgcgc
agacggctgctgtccctgaagtcacttattgagtatgactcgcaggctgtggtggaaata
aaggaaaacactgtggagatttcaggtggggagcacaacgtaatgacggcgtggtccatg
gtggaaaagctgaaaatggagaaggcctctagaggagaggggagcatcctgcaagaggtt
gcagactgcagcggtgagtcagaggacggcagcagctcagagagtgaaactgagcaggct
gccagccacagtacagaaccacagataagcaacaagccacaccgtcagctctgccgctca
ccttgtttggatcgcccaagcttctctcagagcagcatccttcaggacacccaggctgcc
agcctggataaagattaccaggtgaaaatggactttgcactgaagctgggctactccatg
gaacaaattcagactgtactaaacaagctggggccaagtgcactaatcaatgacattctt
gctgagcttgtgaggctaggtaataaaggtgatgtggacacaccctccagtacaagttca
ggtaccagtaccctagtggcacgtgtaccatgcaccaaggaaattacaagtcctgaagca
tcattagaggaggaggccatggacaaccttgacaacctgcggccaattgtcatcgatggc
tctaatgtggccatgagtcatggaaacaaggaagtgttttcttgtcgtggaatccaactt
gctgtggactggtttttggaaaaaggacacaaggatatcactgtgtttgtaccagcctgg
aggaaagagcagtctagacctgatgcacctattacagatcaagagatcctgcggaagctg
gaaaaagagaaaatcttggtgttcaccccttcacgtagagtccagggtcggagggtggta
tgctatgatgaccgtttcattgtgaagctggcatatgactccgatggcattattgtatct
aatgataattacagagatctgcaaaatgaaaaaccagagtggaagaagtttattgaggaa
cgacttttgatgtactcttttgtgaatgacaagtttatgccaccagatgatcctttagga
cgacatggacctagtctagagaatttcctcaggaaacgccctgttattccagagcacaag
aaacaaccatgcccatatggaaaaaagtgcacttatgggcacaaatgcaagtattaccat
ccagagcgtgccaatcagccacagagatcggtcgcagatgagctgcgagcatttgccaag
ctttctgctgtgaaaacaatgagtgaaggtgctctggccaagtgcggcagtgggcctatt
accaccaagggtgactcaagctcagaagtgaagcgcattgctcctaaacgtcagtctgac
cccagcattcgttctgttgcatgtgagctcgaggagaggttgtcagtggctcggaagtct
gaggcaaactctgtgccttccttggtcactgctctaagtgtccctaccatgcagccttcc
aagagtcatgctgctggggcattaaacacgcgctctgccagtagcccagtgcctggctct
tcacaattctctcaccaaggctcctcattggagcatatgtctagtgtgcaatacccaccc
atccttgtcacaaacagccatggcacctccatcagctatagtgaacaatatcccaaatat
gatcctggagctgaccatggttactactccatgcttaatgaattctcaaatcttagtcta
aacagcatgcacaacaccgacaatttctacagcatggagcatgaactgggattatactct
cgaaatccaagtccttgtccagatgcttgtgctgggcattcaagcagtgagccttactca
tcctatagtgacctttacttgagttcagtagactcagctgctgaagatggcgcaaagaac
actccttcatcctctcagaacagacttcagccttttgctcatagtttccacgaagcttta
actcgagttcagagctatgggcctgaagaacctaaacagacccctcgaaagcagtctgtt
tcccatcttgcacctcatgtacagcatccagtggtaggtgcccggtcaagctgtccagga
gattatcctatacctcaaaacattcacccttctgcatcatcacagcctggcagggctctg
ggaatgaccaggatggacagcatttcagactccagactctatgaaagcaatccaatgaga
cagaggaggcctccactctgtagagaacaacatgccagctgggacccgcttccttgtggt
ggttcggactcgtatggatatcatacttcataccccttaagcaacagcctcatgcagcct
tgctatgagcgtgtcatggtgcgaagcatgccagagaaaatggagcagatctggagatca
ccttgggaagggggagcgtctgcagcagaacctcaggaacggtatgtcattccggagcat
cagtatcagacttaccgtaacctctgcaacattttccctgcttatattgttcactccgtt
atggagaagaatcctcatttaacagacccacaacagcttgcagctgtcatagttactgaa
ttacgatctggccgttag
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