Polypterus senegalus (gray bichir): 120537629
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Entry
120537629 CDS
T08668
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120537629
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120537629
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120537629
NCBI-ProteinID:
XP_039622637
LinkDB
All DBs
Position
10:133049017..133128300
Genome browser
AA seq
1436 aa
AA seq
DB search
MLMISTRRAMDGENYLHPEGHQLDNSVFSQSNPHLLPQPMESPMYASSSWFMPPYSLPMQ
TGNQQYVNNTPDIHGNFCSPNFPVMDFSSQGHSTHMPSNGDFAQDLSYIDELSNASLFSS
PADSLSEFADAPNFLNSDGLNNLVPTLWDINPAGQNPLELSSSRFQGINSLEDLSVIINT
PPFGSYQPQPPPPVAEEEEEGDDEEAEELGHIETYADYKPSKSTIGIAHPDIVVETNTLS
SVPPPDITYKLSIPEPTINRGLLSALQLEAIVYACQQHEVILQNRQRAGFLIGDGAGVGK
GRTIAGIILENYLKARKKALWFSVSNDLKYDAERDLKDIEAPNIPVHALNKIKYGDTATS
EGVLFATYSALIGESQAGGQHRTRLKQILDWCGPGFDGVIVFDECHKAKNATSTKMGKAV
LDLQNKLPLARVVYASATGASEPKNMIYMSRLGIWGDGTPFKTFDDFLHAIEKRGVGAME
IVAMDMKVSGMYIARQLSFSGVSFRIEEIGLDDDFKKVYNKAARLWAEALSSFQNAADLL
GLESRKSLWGQFWSAHQRFFKYLCIAAKVRRLVELAKKELSEGKCIVIGLQSTGEARTRE
VLDENDGHLDRFVSAAEGVFQSLVQKHFPTEKRKREKGTGSKRKRKPKCRPPKYPKPCID
IGGVINISDDSSTDSEGLDSDSNSSPDSLLDNDDVIFVNHINSYTAKLEEMKQDLLNKIS
HLGPELPLNTLDELIDQFGGPDHVSEMTGRKGRVVRRADGSVRYESRAEQGLSIDHVNIK
EKERFMNGDKLVAIISEAASSGISLQADKRVKNQRRRVHMTLELPWSADRAIQQFGRTHR
SNQRTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGA
RALDKIIKAILGQIESKVSPPKDYPGGDAMFFRDMKRGLMDVGIFCRELRFGVGVEKDCT
ITKFLNRILGLEVHKQNSLFQYFTDNFDYLIDKDKKEGKYDMGILDLAPGNDKIYEETKA
EFLTPGNPQDGQVVLYKISVDRGMMWDEAYSRFQKVSGPDDGFYLSYKLRGRIPVVLLAE
QNRGKNFIIYKPNIGKQVHLENIESLTKKYRKVPPDDAREYWEEQFNFSIRNCTHAVGTG
KCKQIAEGHECWLGMRLRHYHMLCGALLRVWKRVADIVSDITNSSILQIVRLKTKQHNKQ
VGIKIPESCVNRIQEELKQMDESVRKRRERAARERELQQAARDRELRQEQDYRLMLEKLC
GSQPLDLSKMNPIMPPLTSWSPCPNNFKEILDLTVSPSPPQEPSTGPGTESSGAPVAQAQ
EDLSLESFIAQTSQTGHSLPTLDPQDFAGLVFDETTLNLSTAYQHPEQAAAPRTALTQTP
VHNFQQTLSAPNGQADTNSINIREVLNSMFQTPPERRSVIQYGISPDVHPCQSFDL
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgatttccacacgccgcgccatggacggggagaactacctgcacccggaggga
caccagcttgacaactcagtgttcagccagtcaaaccctcaccttctcccccaacccatg
gagagcccaatgtatgcttccagctcgtggttcatgcctccatacagcttgcctatgcaa
actggaaaccagcaatatgtcaacaacacaccagacattcatggaaacttctgctcccca
aattttccagtgatggacttttccagccaaggccacagcacccatatgccaagcaatgga
gattttgctcaggacctgtcctacatcgatgaactttcaaacgcttccctgttttcctcc
cctgctgactccctttcggaatttgctgacgctcccaactttctcaattcggatggcctg
aacaacctggtgccaacattatgggacatcaaccctgcagggcaaaaccctctagagctg
agctcctccagattccaaggaataaacagtttggaggacctttctgtgatcatcaacact
ccaccatttggttcctaccagccacaacctcccccaccagtggcggaggaagaggaagaa
ggcgatgatgaggaagcagaggagctgggccacatagagacctatgcagactacaagccc
tccaaatccactataggtattgcccacccggatattgtagtcgagaccaacactctgtcc
agtgtgccgcctcctgatataacctacaaactgtccatcccagaacccacaatcaacagg
ggtctgctgtctgccctgcagctggaggccattgtgtatgcatgccagcaacatgaggta
atccttcaaaataggcaacgagcaggcttcctgattggggatggggctggcgttggaaag
ggccggaccattgcgggcatcatactggagaactaccttaaagcaaggaagaaggcatta
tggtttagtgtttccaatgacctgaaatatgatgcagagcgagacctgaaggatatcgag
gcccctaacatccctgtgcatgccttaaacaagatcaagtacggtgacactgctacctca
gaaggtgtgctttttgcaacctactctgcactgattggtgagagccaagcaggcggacaa
cacagaacacggctgaagcaaatccttgactggtgtgggccaggctttgatggggttatt
gtttttgatgaatgtcacaaagccaaaaatgctacatctacaaaaatgggcaaggctgta
ctggatctgcaaaacaagttacccctggcaagagtggtttatgccagtgccacgggtgct
tctgagccaaagaacatgatatatatgagccgcttgggaatctggggggatgggacgccc
ttcaaaacatttgacgacttcctccatgccattgaaaagaggggagtgggggccatggag
attgttgcaatggatatgaaggtcagtgggatgtacatagcccgccaacttagcttctca
ggggtgtcttttcgaattgaagagatcggcctggacgatgactttaaaaaggtgtacaat
aaggcagccagactgtgggcagaggcgctgtcatcattccagaatgctgcagaccttctg
ggcttagagtcacgtaagtcactgtggggccagttctggtcagcgcatcagcgtttcttc
aaatacctctgcatcgctgccaaagtgcgtcgtcttgtggagctggccaagaaggagctg
agtgagggcaagtgtattgtgattggactgcagtctacaggagaggcgcgaacaagggaa
gtcctcgatgaaaatgatggtcatctagacagatttgtttctgcagcagagggtgtcttt
cagtcactagtacagaagcactttcccacagaaaaacgaaaaagggagaaaggaactgga
agcaaaaggaaacgcaagccaaaatgccgcccaccaaagtacccgaagccctgcattgat
attgggggtgtgattaatatcagtgatgacagctccactgattctgaagggttagacagt
gactccaactcttctcccgattccctccttgacaatgacgatgtcatctttgtcaatcac
attaatagctacacagccaagcttgaagaaatgaagcaggatcttctaaacaagattagc
cacctgggacccgaactacctcttaacaccctagatgagctgatcgaccagtttggtgga
cctgatcatgtgtctgagatgaccgggcgaaaaggacgagtggtacggagagcagacggc
agtgtccggtatgagtcacgggctgagcagggcttgtcgattgaccatgtgaacatcaag
gagaaagaacgctttatgaatggagacaagctggttgcgatcatttctgaggccgcaagc
tctggcatctctctgcaggcagacaagcgggtgaagaaccagaggcggcgtgttcacatg
accctagaattgccctggagtgctgaccgggctattcagcagtttgggcggactcaccgg
tccaatcagagaactgctccagagtacatattccttatctccgagcttgctggcgagaga
aggtttgcatccattgtggccaagagattggaaagcctgggagccctcacccatggtgat
cggagagccaccgagtccagagacctgagcaaatacaattttgaaaataagtatggtgcc
cgggccctagacaaaatcatcaaagccatcctaggacagatcgagagcaaggtgtccccg
ccaaaggattacccaggaggtgatgccatgttcttccgagatatgaagcggggcctgatg
gatgtcggaattttctgccgggagttaagatttggtgtcggcgtagagaaagactgtacc
attaccaaattcctgaaccgcatcctgggtctggaggtacacaaacaaaattcactgttc
cagtactttactgacaactttgactacctgatagacaaagacaagaaagagggcaaatac
gacatgggcatcttggatttggcgccagggaatgataagatctatgaggagaccaaagca
gagtttctaacaccagggaaccctcaagatggccaggtggtcctctacaagatcagcgta
gacagaggtatgatgtgggatgaggcctacagccgattccagaaggtgagcggcccagat
gatggtttctacctctcttacaagttaagaggcagaatcccagttgtactgttggcagaa
cagaaccgaggaaagaattttatcatttacaagcccaacattggaaagcaggtccaccta
gagaatattgaaagtctcaccaagaaataccgtaaggttcccccagatgatgcaagagaa
tactgggaagagcagttcaatttctccatccgcaactgtacacatgccgttgggacagga
aagtgcaagcagatagcagaaggtcacgaatgctggcttggcatgaggctgcgacactac
cacatgctgtgtggtgctctgctccgtgtctggaagagggtagctgatatagtttctgac
atcaccaactccagtatcctgcagattgtgcggctcaagaccaaacaacacaacaagcaa
gtcggcatcaagatcccagagagctgtgtcaatcgcatccaagaagagttgaaacaaatg
gatgaatcagtacgaaaacgcagggaacgggccgcacgagaacgggagctgcagcaggca
gcacgtgacagggagctgcggcaagagcaggactatcggctgatgctggaaaaactctgt
ggttctcagcctcttgacttgtccaaaatgaatcccatcatgcctcccttaacctcttgg
agtccatgtccaaacaacttcaaggagattttggacctgacagtcagcccctcaccacca
caggaacccagcacagggccaggtacagaatcttctggggctccggttgcccaagcacag
gaagacttgagcctggagtctttcattgctcagacaagccagactgggcactccctgccc
accctggaccctcaagactttgcaggtctggtgtttgatgaaaccactttaaacctgtct
actgcttaccagcaccctgagcaagcggcggcccccaggacagcgctgacccagacacca
gtgcacaactttcaacagaccttgtctgcacccaatgggcaggccgacacgaacagtatc
aacattcgagaagttttaaacagcatgtttcagactcccccggagcgccgctcggtcatt
cagtatgggatttctcctgatgtgcacccttgccagtccttcgacctttga
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