Polypterus senegalus (gray bichir): 120537670
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Entry
120537670 CDS
T08668
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120537670 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
120537670 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120537670 (lsm7)
03041 Spliceosome [BR:
psex03041
]
120537670 (lsm7)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120537670 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
120537670 (lsm7)
Spliceosome [BR:
psex03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120537670 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
120537670
NCBI-ProteinID:
XP_039622707
LinkDB
All DBs
Position
10:134625345..134641039
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMESIPNPFVQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaaaagaagaagaaggaaagtatctttgacttgtcgaaatacatcgat
aagaccatccgggtgaagtttcagggtggacgagaagccagtggaatcctgaaagggttt
gacccattgctgaatctggtgcttgatggtactattgagtatatgagagatcccgatgac
cagtataagttgactgaagataccaggcagctgggtttggtggtctgtcgtggcacatca
gttgtgctaatttgccctcaggatggcatggagtctattccaaacccatttgtgcaacag
caagatggataa
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integrated database retrieval system
