Polypterus senegalus (gray bichir): 120537809
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Entry
120537809 CDS
T08668
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03420
Nucleotide excision repair
psex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120537809 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
120537809 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psex03051
]
120537809 (rad23ab)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120537809 (rad23ab)
Proteasome [BR:
psex03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120537809 (rad23ab)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120537809 (rad23ab)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Ubiquitin_2
CUE
Dsc3_N
UBA_2
UBA_9
Motif
Other DBs
NCBI-GeneID:
120537809
NCBI-ProteinID:
XP_039622949
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Position
10:146876539..146935422
Genome browser
AA seq
388 aa
AA seq
DB search
MLTITLKTLQQQTFKVEIDPELTVRSLKEKIEAEKGADAYPASGQKLIYAGKILNDDIPL
KDYKIDEKNFVVVMVTKVKASSVAPPPPPVAPLPDVASVPVAAVDLPGDATPLPSSTPPE
VIQPAAEVTPLITPPASSTESSARLPETEERPPEEAEAPSRGSEEDFSLLEEAASILVTG
QAYENLVTEIMSMGYEREQVIAALRASYNNPDRAVEYLLTGIPVESDLPPPEVVHPAPVS
NPTAAPAERTPPAARGVVSSSTNPLEFLRNQPQFSQMRQIIQQNPALLPALLQQLGRDNP
HLLQQITQHQERFVQMLNEPYGEPAEGAEGQGTQQTNYIQVTPQEKEAIERLKALGFPEG
LVIQAYFACEKNENLAANFLLQQNFDDE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccatcaccctgaaaactctgcagcagcagaccttcaaggtggagattgacccc
gagctaacggtaagatcattaaaggaaaaaattgaagctgagaagggcgctgatgcttat
ccagcttctggacagaagcttatttacgcaggtaaaatcttgaatgatgacatccccttg
aaggattacaagattgacgaaaagaactttgttgttgttatggtgacaaaggtaaaagct
tcttctgttgctccgcctcctcctcctgttgcccctctcccagacgtggctagcgtgccc
gtagcagcagttgatttaccaggggatgccacacctttgccctctagtacacctcctgaa
gtgatccagccggctgctgaggtgacacccctcatcaccccgccagcctccagcaccgaa
tcgtctgcccgactcccagagacagaggagcggccgccagaagaggcagaggcgccctcc
agaggttcagaagaagacttcagtcttttagaagaggcagcgtcaatattagttacagga
caagcctatgaaaacctggtcacagagatcatgtcgatgggctatgagcgggagcaggtg
attgcagctttgagagcgagctacaacaatccagaccgggcagtggaatacctattgacg
ggaatcccagtggagtcagacctcccgcctccagaggtggtccatcctgcaccagtttct
aatcccacggcagcaccagctgagagaacgccccctgcagcaagaggtgtggtgtcatct
tccacgaacccactagagtttctgagaaatcagccacagttctcacagatgcgacagatc
atccaacagaacccagcgctcctaccagccttgttacagcagctgggccgagacaatcct
cacctgctacagcaaatcacacagcatcaagagaggtttgtacaaatgttgaatgaacct
tacggagaacctgcagagggggctgaaggtcaggggacgcagcagaccaattacatccag
gtcacccctcaagagaaggaagccatcgagaggttgaaagcattgggcttcccagaaggc
ctggtcatccaagcatactttgcctgtgagaaaaacgagaacctggcggccaacttcctc
ctgcagcaaaacttcgatgatgagtaa
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