Polypterus senegalus (gray bichir): 120537874
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Entry
120537874 CDS
T08668
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120537874 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120537874 (rexo1)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Pre-60S particles
RNases
120537874 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
120537874
NCBI-ProteinID:
XP_039623056
LinkDB
All DBs
Position
10:157941529..158064783
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AA seq
1201 aa
AA seq
DB search
MLRSTGFFRGIDCPFNSGDPEGRRCHRPYCHFRHSGSRRTSCSGREASLQDQGYDPYNPE
IQTQGEENGDESISNNCIEVDSSLLELELVNRAIEAVKSEVEREQKKLSQFEDIVKAEYG
SRARSEDSYGSLEYDPSSYQISAARGYNPTPLSDKYLLDTNNKTVGNSLEYVPTTVSRAI
KAKAAPLTCSKYTLDNSKPVTDLEYDPLSNYSAKLLSKKNSKGRNDFKRNHKAGQEENYI
PVAKKSRHQTNITKYDATISFSESDDESPVDYQPSPIEFMQEGRFSDDDMENREMESKSH
SSKGKEPFAQGNAQESTRIDCVKEGKGDKKKSSSLADKKSSKADGVKSTDKKTTSKEVAK
EKAKKEKPEKTVKGVTAEKQRSKEKVEKTKTSDKAKEKPKEKVNKEIKKVKKEEGGEKPG
KGSQEKAKELPVSKSTVKGDGKDKKPEKGDKAKKDCKVTKDVKNGKPSSSNSSSKPKKND
SQNGSREERKSGLLKKEVKAPPKAQVKHRTLSHADLFGDESDDEETRRFKGRAVKKAAVH
GSSSKRKASEFSSSSSSSSSSSEDDDDGGVDYYSLQNELDCDSDPMEECLRIFNESKEVK
TEDKGRQAKQVSKDFPEETTADGTLTTLFPGQKKRVSHFLSKGEVETPAPKQVIRPYRRP
TPQEMCYQRMQIAQQQAAQLATAIKAEASSAAAAAAAYPGEKKRIAHKPGPSTFITTKSG
PAGTQQPSTSLTSPNKLSCPLPNVKAHTSAAILSKTTTTDVQKRIAHTPSLKSSTLKRPI
IPAEFGGKVPTAIRQKSLNLLIEECLKCCPTEEEAFEKALAEEKVVYDRSSSRSIYCNVA
ANVLNKLRSLSSPAQMSIKQATKTPLNKKRISHEEVLGGRLAAKTSFSINRSGKHPEESL
TGASLYRKLKQYIMTEEQLQENGYPRPNPDKPGKAIVFTATEKKSADPFTRVCCRCGSEY
MVTVSGNCVRKEECNYHWGRLRRVRVPGGWETQYSCCSATVGSPGCQTAKQHVQDGRKEN
LDSFVKTFEKQNLPDGNPGVYALDCEMCYTRHGLELTRITVINADLKVVYDTFVKPDSKV
VDYNTRFSGVTEEDLENTTITIRDVQAVLLSMFCSDSILIGHSLESDLFALKLIHSTVVD
TAIVFPHRLGPPHKRALRNLMADYLKRIIQDNVEGHDSSEDARACMELMLWKIKEDAKVM
R
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatcgacaggcttctttcgagggattgactgccctttcaacagcggcgacccc
gagggaaggcgctgccacagaccctattgtcacttcaggcacagcgggagcaggaggacg
tcttgtagcggccgagaggcctctcttcaagatcaaggctatgatccatataatcctgaa
attcaaacacagggagaagaaaatggagacgagtccatttcaaacaattgtattgaggtg
gactctagccttcttgagttggagttggtcaacagagccattgaggcagtcaagagtgaa
gtggagagggagcagaagaaactgtcccagtttgaggacatcgttaaggctgaatatggc
agccgggcccgttcagaggactcttacggtagcctcgagtacgatcccagcagttaccag
atcagtgcagctcgaggatataacccaacaccactttctgacaaatacctgctggacacc
aataataaaacggtagggaactccttggaatatgtcccaaccactgtgtcgagggccatc
aaggccaaagcagcccctttgacttgtagtaaatatacattagacaattcaaagcccgtc
actgacctagaatatgaccccttgtccaactactctgccaaacttctgagtaagaaaaac
tcgaagggtcgaaacgatttcaaaagaaaccacaaagctggtcaagaggaaaattatatc
cctgtcgctaaaaaatcccgccatcagaccaacatcacaaagtatgatgcgaccattagc
ttttcagagtcggacgacgagagtccagtggattaccagcccagtccgattgaattcatg
caggaggggaggttctctgacgatgacatggagaacagagagatggaatccaaatctcac
agttcaaaggggaaagaaccttttgcccagggtaatgcccaggagtcaaccagaattgac
tgtgtcaaagaaggaaaaggcgataagaagaaatcttcaagcctggccgacaagaaaagt
tctaaagcagatggtgtcaagagtacggacaagaagaccaccagcaaggaggtggccaag
gagaaagcaaagaaggagaagccagagaagaccgtaaaaggtgtcactgcagaaaagcaa
agaagtaaagagaaggtggaaaagaccaagacaagtgacaaagccaaggagaaacccaaa
gagaaagtcaacaaggagattaagaaggtgaaaaaagaagaaggcggtgaaaagcctgga
aaaggcagtcaagagaaagcgaaagagctccctgtgagcaaatccacagtgaaaggagat
gggaaagacaaaaagccggaaaaaggagacaaggcaaagaaggactgtaaggtcacgaag
gatgtcaagaatgggaagccatcgagtagcaacagcagcagtaaaccgaaaaaaaacgac
agccaaaacggctccagggaagagcgaaagagtggcctgttaaaaaaggaggtgaaggcg
ccccctaaagcacaagtcaagcacaggacattaagtcatgcagacttgttcggcgatgag
agcgatgatgaggagactcggagattcaaaggccgtgctgtcaagaaggctgccgtccat
gggagcagtagtaaaaggaaagcctccgagttttcgtcgtcctcttcctcctccagctct
tcttcagaagatgatgatgatggtggtgtggattattacagtttacaaaatgaacttgac
tgtgactcagaccccatggaggaatgtttaagaatatttaatgaatcgaaggaagtcaaa
acggaggacaagggcagacaagcaaagcaggtatctaaggattttcctgaagagacgact
gcagatggcactttaacaactctttttcctggtcagaaaaagagagtttcacatttcctg
agtaaaggagaggttgaaacaccagcacctaaacaggttatccgaccatacagaaggcca
acccctcaggaaatgtgctaccagcgtatgcagattgcacaacagcaggcagcccagctc
gccacagcaataaaggctgaagcttcatcagcagcagcagcagcagctgcataccctgga
gagaagaagaggatagctcacaaaccaggaccatccaccttcatcacgacgaaatcagga
ccagctggaacacagcagcctagcaccagtctgacttcacccaataaactcagttgtcct
cttccgaatgtaaaggcacatacatcagctgcaattctatcaaagaccaccaccactgac
gtgcagaagagaatcgctcacaccccatctttaaagagttcaactttaaagaggccaatc
attccagcagaatttggaggcaaggtccctactgctattcgacaaaaatctctcaattta
ttaattgaagagtgcctcaagtgctgccccacagaagaggaagcatttgaaaaggcgctt
gcggaggagaaagtggtttatgaccgcagcagtagtcggagtatctattgtaatgtagct
gcgaatgttctgaacaaactccgaagcttgagtagtccggcacagatgtcaatcaaacag
gccacaaaaacacctttaaataagaagaggatctcccatgaggaggtgcttggtggaagg
ttggcagccaaaaccagtttctctatcaaccgttctggaaagcacccagaagagtctctc
accggtgcgtcactgtataggaaactgaagcaatacatcatgactgaagagcagctgcaa
gagaatggatatcctcggccaaatcctgacaaaccgggcaaagcaatagtcttcacagcc
acagaaaagaaaagtgctgaccctttcaccagagtatgttgccgttgtgggtctgaatat
atggtgaccgtcagtggaaactgtgtccgtaaagaggaatgtaactatcactggggaaga
ctacggcgagtgagagttcctggaggttgggagactcagtacagctgctgctcagcaaca
gtgggctctccagggtgtcagacagccaagcaacatgtgcaagatggacgcaaggaaaat
ttggatagttttgtaaaaacgtttgagaagcagaacttgccagatggaaatccaggtgtt
tatgctcttgattgcgaaatgtgctacacaaggcatgggctcgagctcacccggatcaca
gtgattaacgcagacctcaaggtggtctatgatacatttgtgaagccagacagcaaagtg
gtggattataacacaaggttttctggggtgacagaagaagatcttgaaaacacaactatc
acaatcagggatgtgcaagccgttcttctgagcatgttctgctcagactccatcttgatt
gggcacagcctggagagtgacctttttgcactgaagttaattcacagcactgttgttgac
actgcaattgtcttcccgcaccgcctgggaccgcctcacaaacgagcccttagaaattta
atggcagactacctcaagcgcatcattcaggacaatgtggaaggacacgattctagcgag
gatgccagagcttgtatggagctgatgctctggaagatcaaggaggatgcaaaagtgatg
agatga
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integrated database retrieval system
