Polypterus senegalus (gray bichir): 120537922
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Entry
120537922 CDS
T08668
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120537922 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
120537922 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120537922 (lsm4)
03041 Spliceosome [BR:
psex03041
]
120537922 (lsm4)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120537922 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
120537922 (lsm4)
Spliceosome [BR:
psex03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120537922 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
120537922
NCBI-ProteinID:
XP_039623131
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All DBs
Position
10:162407010..162452352
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AA seq
143 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQPNKMQQKGRGGGVAGRGVFGGRGRGV
PGTGRGGQQEKKPGKPAGVKNQH
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttatcgttgctgaagactgcgcagaatcatccaatgcttgtggagctcaag
aatggggagacctacaatggacacttggtgagctgtgacaactggatgaacatcaacctg
cgcgaagtcatctgtacgtccagggatggcgataagttctggaggatgccggagtgttac
attcgaggaagcaccattaagtacctgcgtattccagacgaaatcattgatatggtgaaa
gaggaggttgtgtcgaaaggccgtggccgcggcggtatgcagcctaacaaaatgcagcag
aagggtcgtggaggtggagtagctggacgaggtgtttttgggggccgcggcagaggcgtc
cccgggacaggaagaggaggacagcaagagaaaaagcctggcaagccggcgggggtcaag
aatcagcactga
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integrated database retrieval system
