Polypterus senegalus (gray bichir): 120538096 Help Entry 120538096         CDS       T08668                                  Symbol prpf19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism psex  Polypterus senegalus (gray bichir) Pathway psex03040   Spliceosome psex04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:psex00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120538096 (prpf19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     120538096 (prpf19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:psex03041]     120538096 (prpf19)    04121 Ubiquitin system [BR:psex04121]     120538096 (prpf19)    03400 DNA repair and recombination proteins [BR:psex03400]     120538096 (prpf19) Enzymes [BR:psex01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      120538096 (prpf19) Spliceosome [BR:psex03041]  Complex B   Other components    Prp19 complex     120538096 (prpf19)  Complex C    Prp19-CDC5 complex     120538096 (prpf19) Ubiquitin system [BR:psex04121]  Ubiquitin ligases (E3)   U-box type E3    120538096 (prpf19) DNA repair and recombination proteins [BR:psex03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     120538096 (prpf19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_Vps41 U-box Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_HPS5 PEP5_VPS11_N PROPPIN Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Ge1_WD40 B-prop_COPA_B_2nd RMC1_N Cytochrom_D1 zf-Nse Beta-prop_WDR19_2nd ATG16 DUF1830 Motif Other DBs NCBI-GeneID:  120538096 NCBI-ProteinID:  XP_039623458 LinkDB All DBs Position 10:172120072..172144553 Genome browser AA seq 504 aa AA seqDB search MSLICSISNEVPEHPCVSPVSNQVFERRLIEKYIAENGTDPVNGQPLSEEQLIDIKVSHP IRPKPPSSTSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLAVPQAVPASQPMTVGAGESMEVGEQVGMTPDIIQKLQDKA TVLTTERKKRGKTVPEELVRAEDLSKYRQVASHAGLHSASIPGILALDLCPSDTSKVLTG GADKNVVVFDKNAEHIIATLKGHTKKVTSVVYHPSQTVVFSASPDSTIRIWSVPNSSCIQ VVRAHEGPVTGLSLHATGDYLLSASEDQYWAFSDVQTGRILTKVADESSACALTCAQFHP DGLIFGTGTIDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATSADDSSVKLWD LRKLKNFKTIQLDDNYEVKSLVFDQSGTYLAVAGSDIRIYVCKQWSEVLNFTEHSGITTG VAFGQHAQFLTSTGMDRSLKFYSL NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgtcgttaatttgctcaatttctaatgaggtgcctgagcacccctgtgtatctcctgtg tctaatcaggtgtttgagcgaaggctgatcgagaagtacattgcagagaatgggactgat cctgttaatggacagccactctccgaggagcagctaattgatattaaagtatcacatcct attcgtccaaaaccaccttcatccacaagtatccctgcaattcttaaagccctacaagat gaatgggatgctgttatgttgcacagcttcactcttagacagcagctacaaaccactcgg caggagctctcccacgccctgtaccagcatgatgctgcctgcagagtcattgctaggctg accaaagaagtaactgctgccagagaagccttggctactctgaagcctcaggctggattg gctgttcctcaagcagtgccagcttctcagcccatgacagtgggtgctggagaatctatg gaagtgggtgaacaggttggaatgactcctgacatcattcagaagcttcaagacaaagct actgtgctcaccactgagcgtaagaagagaggaaagaccgttcctgaggaattggttcgt gcagaggatctcagtaaatatcgccaagttgcttctcatgcaggtctgcatagtgccagt atcccaggaattcttgctcttgacctctgcccatcagacaccagcaaagtgcttactggt ggtgctgataaaaatgttgttgtctttgacaaaaatgctgaacacattattgcaacactc aagggccacaccaagaaagtcaccagtgtggtataccatccatctcagactgttgtcttc tcagcttcccccgactcaactattcgtatttggtctgtgcccaattcctcttgcattcaa gtggttcgagcccatgaaggtccagttactgggctcagtctgcatgctactggagactac ctgttgagtgcttcagaggatcagtactgggcattctcagatgttcagaccggccgtatt ttgaccaaggtagcagatgaaagttctgcttgtgctttaacctgtgcccagttccatcct gatgggctgatttttgggactggaacaatagattctcagataaagatttgggatctaaag gaaagaacaaatgtagccaacttccctgggcactctggaccaatcacaagtattgctttc tcggagaatggttattacctggccacatctgcagatgactcttctgtcaaactgtgggat ctgcgcaagctcaagaactttaaaactatccagctggatgacaattatgaggtgaaatct cttgtctttgatcaaagtggcacatacctggcagttgcaggctcggatattagaatttat gtctgtaagcaatggtcagaagtcctgaacttcacagaacacagcggaatcaccactggt gtggcatttggacagcatgctcagtttcttacttcaactggaatggatcgtagccttaaa ttctacagtttgtaa

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