Polypterus senegalus (gray bichir): 120538115
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Entry
120538115 CDS
T08668
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120538115 (ssrp1b)
03036 Chromosome and associated proteins [BR:
psex03036
]
120538115 (ssrp1b)
Transcription factors [BR:
psex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
120538115 (ssrp1b)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
120538115 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120538115
NCBI-ProteinID:
XP_039623479
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All DBs
Position
10:173166239..173231224
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AA seq
712 aa
AA seq
DB search
MGDTLEFNDIYQEVKGSWNDGRLRLSKQAVVFKSNKTGKVDNIQSADLSECLWRRVALGH
GIRLQTKAGHVYKYDGFREVDFEKMAEYFKSNYRVTLTEKDLCVKGWNWGTARFGGQLLS
FDINDQPAFEVPLTNVSQCTTGKNEVTLEFHQTDDTEVSLMEVRFYVPPSSTDDGIDPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEDVEKKFE
GKLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHIRFDEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
SKKLNIKNRGLKEKDKGIKGNDNAYSDSDEDQHDAYLERMKEEGKIREEAANDSSDESGN
ETDESFNPGEEDDDVAEEYDSNATGSDSSAEEGDSDDDNKKKPPKKAKIVKEKSEKKSHK
KAEGKKGKDPGAPKRPMSAYMLWLNANREKIKSDFPGISVTEISKKAGEMWKGMSKEKKE
EWDRKAEEAKKDYEKAMKDYKESGGGSAPASSKKESKKQSKGKGDNKKAKPPSKSPVKVP
TPVGNESFKSKEFVSSDESSSDSEKDKKSEGSEEEEVASTPPSSEESGSDEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgggggacacattggagtttaacgacatttatcaagaggtgaaaggctcctggaacgat
ggtcgtttgagactcagcaagcaggctgttgtgttcaagagcaacaagaccggcaaagtt
gacaacattcagtcggctgatctttctgaatgcctttggcgcagagtagccctcggccac
gggatcagactacaaaccaaggctggtcatgtttacaaatatgatggcttcagggaggtg
gactttgagaagatggcagagtattttaagtctaattatcgggttactcttactgagaag
gacttgtgtgtcaaaggttggaactggggtacagcacgttttggaggacagcttctgtct
tttgatataaatgaccagccagcctttgaagtaccccttacaaatgtctctcagtgcact
actggaaagaatgaagtaacactggaattccatcagactgatgacacagaggtctccctg
atggaggttcgcttctatgtaccaccgtcttcaacagatgatggcatagacccagtggag
gcatttgcacagaatgttctctccaaagctgacgttattcaggccaccggtgatgccgta
tgtatcttccgagaactgcagtgcctcactccaagaggacgctatgatattcgaatctat
cctacttttctccacctacacgggaagacatttgactacaagatcccatacaccactgta
cttcggctatttttgctcccacataaggatcaacggcagatgttctttgttataagcctg
gatccaccaataaaacaaggacaaactcgctatcatttcttaattctgctcttctcaaaa
gatgaagacatctccttaactctaaacatgaatgaggaggatgtggagaaaaaatttgag
ggcaagctgaccaaaaacatgtctggctctctctatgagatggtcagcagggtaatgaaa
gctttagtcaacaggaagataacagttccaggcaacttccaggggcattctggggcccag
tgtatcacctgttcttataaagcaagctcgggacttctttatccacttgagcgaggtttc
atctatgtccataagcctccagttcacattcgatttgatgagatctcctgtgtaaatttt
gctcgtggtaccacaacaacaagatcctttgattttgagattgaaacaaagcagggtaac
cagtacaccttcagcagtattgaaagggaagaatatggcaagctgtttgactttgtaaac
agtaagaagctgaatattaagaatagaggacttaaagagaaagataagggaattaagggt
aatgacaatgcctattcagattctgatgaagatcagcatgatgcttacctagagagaatg
aaggaggaaggaaagatacgggaggaggcagcgaatgacagcagtgatgaatctggtaat
gagactgatgaatcctttaacccaggagaggaagatgatgacgttgctgaagaatatgac
agcaatgcaacagggagtgattccagtgctgaggaaggagatagtgatgatgataacaag
aagaaaccaccaaaaaaagctaaaatagtaaaggaaaaatcagaaaaaaaatcacacaag
aaagctgagggtaaaaaaggaaaggatcctggtgctcccaagaggccaatgagtgcctac
atgttgtggctgaatgcaaaccgggaaaagatcaagtctgacttcccaggaatcagcgta
acagagatttccaagaaagctggagaaatgtggaagggcatgagtaaagagaagaaggag
gaatgggacagaaaggctgaagaagccaagaaagattacgagaaagcaatgaaagattac
aaggaatcaggaggaggttctgctcctgcctcttctaagaaagagagtaaaaaacagagc
aaaggaaaaggagacaataaaaaggcaaagccgccttctaaaagtccagtgaaggtgcca
actcctgtcggtaatgagagcttcaagagtaaagagttcgtatcgagtgatgagagttct
tcagattcagaaaaggacaaaaagagtgagggttcagaggaagaggaagtggctagcaca
ccaccaagctcagaagaatctggctcagacgaggaatga
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