Polypterus senegalus (gray bichir): 120538271
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Entry
120538271 CDS
T08668
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120538271 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120538271 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
psex04131
]
120538271 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
psex03029
]
120538271 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120538271 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120538271 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
120538271 (si:dkey-110c1.10)
Membrane trafficking [BR:
psex04131
]
Others
Actin-binding proteins
Myosins
120538271 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120538271 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120538271 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
DUF6477
nSTAND3
AAA_16
Zeta_toxin
HSF_DNA-bind
AAA_22
DUF6164
Motif
Other DBs
NCBI-GeneID:
120538271
NCBI-ProteinID:
XP_039623664
LinkDB
All DBs
Position
10:144110443..144171050
Genome browser
AA seq
1732 aa
AA seq
DB search
MPALALYTKGTRVWIPDPEEVWIPAKLSQDFKDGDNSLLLQLGSGMELHYSIGNGLPPLR
NPDILEGENDLTALSYLHEPAVLHNLHIRFLESNSIYTYCGIVLVAINPYESLPLYGEEV
IDAYSGQNVADMDPHIFSVAAEAYRQMTREQQNQSIIVSGESGAGKTVTAKFAMRYFATV
GGTAQESSVEDRVLATCPIMEAIGNAKTTRNDNSSRFGKYIEIDFGPRGDIVGSSMRTYL
LEKSRVIFQAPQERNYHIFYQMCAARHLPEFSMLRLRPADEFHYTNQGGRVDIPGVDDAS
ELELVRNSLSLLGVRPAQQASLFQILAGILNLGNVDIRSNSRDAERSNINPADNSLHAFS
QLLGVEQTQMAHWLCHRKLQVAGETLVKPIGFQQACEARDALAKHIYDRLFAWTVERLNR
ALQTQHRQTQSFIGVLDIYGFEMFQTNSFEQFCINYANEKLQQQFTQHVFKLEQEEYLRE
GINWNRIDFRDNQPCIELIEGKLGILELLDEECKMPKGSDTSWAQKLYEHHVNHSQHFQK
PRLSSSTFLILHFADTVEYQCEGFLEKNRDTMFEEPINILRASKSEFVAELFPDEVPREF
SFLPSAKSILPTRNQLSSRKAVREHKHTVSFQFRQSLHLLMSTLNLTTPHYIRCIKPNDL
KKSFLFDPKRVVQQLRACGILETIWISAAGYPSRWTYLEFYSRYWPLFRPEDLSLKDPQS
ACRNLLGALILDSDQYQFGKSKIFFRAGQVAYLERLRAERLCAACILIQAWVRGQLVRRR
YQRTRKAAMTLQTYCRGFLARRLAQILRWTRAALVIQKNCRMVQVRRPYLLIRAATITLQ
AYTRGALARRTARQLRMEKMATILAAYVRGWLARRWFQHIRSAVIYLQCCCRRMWARREL
RQLRIEARSVERYRELNRGMEVKLMQLQLKADEQARENKALKDQLQMAKTIHCKEVERLQ
GELSRLQADQQAEGVSEGQAEELAALRSMVTQEREDRRATEERHSADIARLSEMLNSSNN
WPNVSVQSSEQDKPDVCLQKQPFGQDYSWSSASAVKSLELEKSALIQEKEDLHSHLVKME
QEMEDKINQQVTLEKTSLSLELEEERRRYQGLLKEFSRLEQRYENFKEEMAFSERVLGHR
RTPSSMSLNLDYIPETTGVSSSPQEPKRKISMVTASEVNDRLDSRAGSLHLTAMDSLKEA
VGLQKDEVKGLSEEDLSHAYDAVCVANRILEAQLASQRGTWDSEINSWRLQVQVLREEMD
RQSQAHARLLQLPPGEQLHRGLQDQLTRLTADNLDLLEQLESQEQVARKLRRELNLLRSV
QRRDLKPGMVKSEGITPHKAVELQGLLRCQKKDEIQLLKNLVTNLCLDTIRAETPGLPAH
ILFLCMRHADACGEEVRAQAFCFAAVTAIKGTLKKHPDDVEITSFWLSNTILLLNLLRHF
SSKEVSEGLMSGNINEEGLLSGDFSDPCKSLADLIIQAYQQLIRISESRLHPMIVPAMLE
CEAIPGLLGSSKGSGFCRWMSSSTTVDEASSHNMDLMLQELSSLHATLSAWALPLEICHQ
AFRQFSYMIAALTLNNLLLRRDMCSWTKGLQIRYNISQLEDWLRGRSLHLGGALEALEPL
IQAAQLLQVSKQSESDAESIVQTCTALSTHQIVKILSVYSPLNDYEERVTLKFIHNVQSL
LKNRSEGESRQYLLMDVKHTFPVTFPFLPPSHVRSENLHIPENLKLSFLQRV
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgccagcattagcactctacactaagggcacccgggtgtggatcccagatccagaggag
gtgtggattccagcaaaactaagccaggacttcaaagatggagacaacagccttcttctc
cagctgggcagcggaatggagttgcattattccattgggaatggtttgcccccattgcgg
aatccggacatcttggaaggggagaatgaccttactgcccttagctacctacatgagcca
gctgtgctgcacaacctccacatccgcttcttggaaagcaatagcatctacacgtactgc
ggtatcgttttggttgcaattaatccatatgagtcattgcccctctacggtgaggaggtc
attgatgcctacagtggacagaatgtggctgacatggacccacacatcttctcagtggct
gcagaggcttatcgacagatgacacgggaacaacaaaaccagtccattattgtgagtggt
gagtctggtgctgggaagacagtcacagccaaattcgctatgcgctactttgccacagtt
gggggaactgcacaggagtcaagtgtagaagacagggtgctggcaacctgtcccatcatg
gaggcaattggcaatgccaagacaactcgcaatgacaacagcagccgctttgggaagtac
attgagattgactttgggccccggggtgacattgttgggtccagcatgaggacctacctg
ctggagaagtccagagtcatcttccaggcccctcaggaaagaaattatcacatcttctac
cagatgtgtgccgccagacacctcccagagttcagcatgctcagactacggcctgcagac
gaatttcactacaccaaccagggcggcagagtggacatcccaggggtggacgatgcttca
gaattggagctggtcaggaattcactctctctgctgggagtgcgtccagcccagcaggca
tcactctttcagattcttgcaggaattttgaatcttggaaatgtagacatcagaagtaac
agtcgagatgccgaacgatccaacatcaaccctgccgacaactctctgcatgccttctcc
cagcttctaggggtggaacagacccagatggcacactggctgtgccacagaaagctacag
gtagctggagagaccctggtgaagcccattgggttccagcaggcctgtgaggcccgtgat
gctctcgccaagcacatctatgaccggttgtttgcctggacggtggagcggctcaacaga
gcattgcagacacagcaccggcaaacccagagcttcattggggtccttgacatctatggc
tttgaaatgttccagacaaacagctttgaacagttctgcatcaactatgccaatgagaag
ctgcagcagcagttcacccagcatgtgttcaaactggagcaggaagaatatctaagggag
ggcatcaattggaaccgaatcgacttccgggacaaccagccctgcattgaacttattgag
ggcaaactgggaattctagagcttttggatgaagagtgcaaaatgcccaagggctctgat
accagttgggcacaaaagctgtatgagcaccatgtcaaccacagccagcatttccaaaaa
ccccgtctgtccagctctaccttcctcatcctccactttgcggatacggtggagtaccag
tgtgaaggtttcttagagaagaatcgtgacaccatgtttgaggagcccatcaacattctc
cgtgccagcaaatcagaattcgtagcagagctgtttccagatgaggttcccagagaattc
tccttccttcctagtgccaagtctatactgccaacaaggaaccaactctcctctaggaag
gctgtccgagagcacaagcacaccgtgagctttcagttccgccagtctctgcacctgctg
atgagcaccctgaatctgacaaccccacattatatccgctgcattaaacccaatgacctg
aagaagtccttcttatttgacccaaaacgtgtggtccagcagcttcgagcttgtggcatt
ctggagaccatatggatcagtgctgcagggtacccatccaggtggacctatctagaattc
tacagcagatattggcccctgttccgaccggaggacttgtctctgaaagacccgcagtct
gcatgccgaaacctcttgggagcactcattctagattcagatcagtatcagtttggaaaa
tcaaaaattttcttcagggctggccaggtggcatacctggagaggctgagggctgagcgg
ttatgtgcagcctgtattctgatccaggcgtgggtgcgtgggcagctggtaagaaggagg
taccagaggacacgtaaggctgccatgacactgcagacgtactgccggggtttcttggcc
agaaggctagcacaaattctccgatggacacgggcagctttggtgatacagaagaactgt
aggatggttcaagtgcgcagaccttatcttttgatacgagcagccacaataaccctgcaa
gcctacactcgaggggcactggcacgacgcacggctcggcagctccgaatggaaaagatg
gccaccatcctggcagcctatgtacgtggttggctggccaggcgatggttccagcacatc
cgtagtgctgttatttaccttcagtgctgctgccggcggatgtgggcacgcagagaactg
cggcaactacggattgaagcccgttctgtggagagatacagggagctgaacagaggcatg
gaggtcaagctcatgcaactccaactcaaggcagatgaacaggcccgtgagaacaaggca
ttaaaggatcagctgcaaatggcaaagacaattcactgcaaggaggtggaacgcctgcag
ggggagctttcacgactccaagctgatcagcaagcggagggtgtgagtgaggggcaggct
gaggagctggcagcactgagaagtatggtgacacaagagcgggaggatcggcgggcgaca
gaagaaagacacagtgcagacatcgccagactctctgagatgcttaacagcagcaataac
tggcctaatgtatctgtgcagtccagtgaacaggataagcctgatgtttgcctgcagaaa
cagccctttggtcaggattattcttggtcgtccgcctctgctgtgaaatcccttgagctg
gagaaatctgcacttattcaagaaaaggaggatctgcacagtcacttggtgaaaatggag
caggaaatggaagataagatcaatcagcaggtgacgctggagaagaccagccttagcctg
gaactggaggaggagcgaagacgctatcagggtctgctgaaggagttttcgcggttggag
cagcgatatgagaacttcaaggaggagatggcttttagtgagcgtgtcctgggacaccgc
agaaccccgtcctcaatgagcctgaatcttgactacattcctgagaccactggagttagc
agtagcccacaggagccaaagcgcaagattagcatggtgactgcatctgaggtgaatgac
aggcttgatagcagagctggatcgctccatctcactgcaatggattctctcaaggaggca
gtgggcctgcagaaggacgaagtgaaaggattgagtgaggaagacttgagtcatgcatac
gatgcggtctgtgtggccaacaggatactagaggctcagcttgcctcccagcgtggtacc
tgggactctgagataaacagctggcgactgcaagttcaagttcttcgggaggagatggac
aggcagagccaggcccatgctcgtctgctccagctgccccctggtgaacagcttcatcga
gggctacaggatcaacttacacggctcactgcagacaacctagatctgctagagcagctg
gagagtcaggagcaggtggcccgtaagctgaggagggagctgaacctgttgaggagtgtg
cagaggcgtgacctcaaaccaggtatggtgaaatctgagggcatcacacctcacaaagct
gtagagctccaagggctgctgcgctgtcaaaagaaggatgagatacagctgctcaagaac
ctggtgacaaatttgtgtctggacacgatacgggccgagactcctggattgcctgcacac
atcctgttcttatgcatgagacatgctgatgcttgtggagaagaggttcgggcgcaagct
ttttgctttgctgctgtgactgccattaaaggcactcttaagaaacacccagacgacgtg
gagataacaagtttctggctctccaacaccatcctcttgcttaatcttcttcgacacttc
agctccaaggaggtcagtgaagggctgatgagtggaaacatcaatgaggaaggcctcctg
agtggtgacttcagtgacccatgcaaatccttggccgacctgattatccaagcctaccag
cagctgatccggatttcagagagccgactgcaccccatgattgtaccagccatgctggaa
tgtgaggctatccctggcttattaggcagttccaagggttctggattctgcaggtggatg
tcaagtagcaccacagtggatgaggcgtccagccacaacatggatttgatgcttcaggag
ctgagcagcttgcatgccaccctgagtgcctgggcactacctttagagatttgtcatcaa
gccttccggcaattcagctacatgattgccgctttgacacttaacaacctgctgctccgg
cgggacatgtgcagttggaccaagggacttcagatccggtacaacattagtcaactcgag
gattggcttcgaggccggtcacttcatctagggggagctttagaggctcttgagcctttg
atccaggcggcacagctcctgcaggtcagcaagcagtcagagagtgatgctgagtctatc
gtgcagacctgcacggccttgtctactcaccagattgttaagatcctaagtgtatactct
cctctcaatgactacgaggagcgagtcaccctgaaattcatccacaatgttcagagtttg
ctgaagaatcgctcagaaggggagtcccggcagtaccttctgatggatgtgaagcacacc
ttcccagtgactttcccttttctcccaccctcccatgtccgctcagaaaatcttcacata
ccagaaaacttaaagttgtcttttcttcagcgtgtgtga
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integrated database retrieval system
