Polypterus senegalus (gray bichir): 120538586
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Entry
120538586 CDS
T08668
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120538586 (bms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120538586 (bms1)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
90S particles
GTPase
120538586 (bms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
RNA_helicase
AAA_22
AAA_16
AAA_14
AAA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120538586
NCBI-ProteinID:
XP_039623913
LinkDB
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Position
1:209663213..209691243
Genome browser
AA seq
1208 aa
AA seq
DB search
MKEEKQQHKIHQKKHSGPKAERKKRKRQQEQQAGTNEEDGRKRNPKAFTVHSAVRMARTF
HRTQDLKTKKHHAPIVDRSPQEPPPILVVVVGPPRVGKSTLIRCLIKNFTKQKLTEINGP
VTIVSGKKRRLTFIECGNDISTMIDLGKVADLVLMLIDASFGFEMETFEFLNICQVHGFP
KIMGVLTHLDSFKNNKQLRKTKKRLKHRFWTEVYQGAKLFYLSGMVHGEYQNQEIRNLGR
FISVMKFRPLVWQTSHPYVLADRMEELTDPEAVRLNVKCDRKISLYGYLRGAHLKNKSQI
HIPGVGDFTVSDLSFLPDPCPLPEEQKKRALNEKERLLYAPMSGVGGVVYDKDAVYIDLG
GSHAQEEPRPSTELVQSLISTHSTIDAKMAVSKVSLFSGSAALQSDELQDEEPCQENPKE
ETIWDPEKGRVRRRAMFAGENQEEDDDDSEEDSDDDDEENEDEDDMSEEEYEVDKDNDKE
VSDAEECGPLKRRKLKEDVEIDEVLAFADSDDELEKSEQESSDDDSILSNENVCKNKRQI
AVRDSGHCTDEELQGSDEEHNLMKQAKVNIIKLESSESKDDEEMCVETAGALHWKEGLAK
KAAEAFFRQQQIAPNLRKLVYGKVMDDKEEEAEEEEIGGLFHVSRPKAQMRCRANGIDCS
RYPVDTDRDWDCEEVLDSIRDCFVTGNWDKNEDAAKLLQEDDELYGDFEDLETGEVHQGD
TDKDKDQSDQEDTGGDEDEKEEEEKEKAEKNERLDKKKRLKEKFDLEYDEGESTYFDDLK
GEMQRQAQLNRTEFENVDDETRVQYEGFRPGMYVRIEIEGVPCEFISNFDPNYPIILGGL
GNQEGSIGYLQMRVKKHRWYQRILKTRDPLILSLGWRRFQTIPLYYVEDHNGRQRLLKYT
PQHMHCGGAIWGPITPQGTGFLAIQSLAGGKAGFRIAATGVVLDLNKSVTIVKKLKLIGF
PYKIYKNTAFIKGMFNSILEVAKFEGAILRTVSGIRGQIKKALHTPGAFRASFEDRLLMS
DVVFLRSWFPVSVPQFYNPVTSLLQPVGGKDKWNGMRTVGQLRHDLQMNLPHNKDSLYKP
IIRKMRHFNPLHIPKDLQRMLPFKSKPKLQEKKGNVPKNLQRPAVIKEPHERKIASLLVA
LGTVHNYKKKAAQAKHHDQRKQFFRQKQGEEADKMKRQKEARKKIYRIIGQKEKKRQKSS
LKGSGHKE
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaagcagcagcacaaaatacaccaaaagaaacacagtggccccaaggcc
gaaagaaagaagagaaagagacaacaggagcagcaggctggcaccaatgaggaagatgga
aggaagagaaaccccaaggcatttacagtgcattcagcagtgcgtatggctcgcactttc
cacaggactcaagatcttaaaacaaagaagcatcatgcaccaatagtggatcgttcacct
caagagcctcctcctattcttgttgttgttgttggtcctcctcgtgtgggcaagagcaca
ctgatccgctgtctgattaagaatttcacaaagcaaaaactgactgaaattaatggacca
gttaccattgtatcagggaagaagaggcgtctcacattcatagaatgtggaaatgacatc
agtaccatgattgacttgggcaaagtggcagaccttgtactaatgctgattgacgccagt
tttggatttgaaatggaaacctttgaatttctcaacatctgccaggtgcatggtttccca
aagatcatgggagtgctgacccacttggactcattcaagaataataaacagctccgcaaa
accaagaaacgtctaaagcatcgattctggacagaagtttaccagggtgccaagctgttt
tacctctcgggaatggtacatggcgagtatcaaaaccaagagatccgtaatcttggtcgc
ttcatttctgtcatgaagtttcggccactggtatggcaaacatcacatccttatgttctt
gctgatcgaatggaggagctgactgacccagaggctgttcgactaaatgtgaagtgtgac
cgtaagatttccttgtatggatatctcagaggagcgcatttgaaaaacaaaagccaaatc
cacattcctggtgttggcgacttcactgtgagtgacctgagcttcctcccagacccctgt
cctcttcctgaagaacagaaaaagcgtgcacttaatgagaaagaaaggctgctttatgct
ccaatgtctggagtaggtggtgtggtctatgataaagacgcagtgtatattgacctgggt
ggaagccatgcacaggaggagcctagaccttcaacagaactggtgcagtcccttatcagc
acacattctaccattgatgcaaagatggctgtcagcaaggtatcactcttcagtggttct
gccgcactacagtctgatgagctgcaggatgaggagccatgccaggagaaccccaaagaa
gagactatttgggatcctgaaaaaggaagagttcgacgaagagctatgtttgctggtgag
aatcaggaagaagatgatgacgacagtgaggaagacagtgatgatgatgatgaagaaaat
gaagatgaggatgatatgagtgaggaagagtatgaggtagataaagataatgacaaggaa
gtgtcagatgcagaagaatgtggaccactcaagcgacggaaactgaaggaagatgtagaa
atagacgaagtattggcttttgcggatagtgatgatgagttggagaagagtgagcaagag
agtagtgatgatgacagtattttgagcaatgaaaacgtgtgtaagaacaaaaggcaaatt
gctgttcgagattctggacattgcactgatgaggaactccaaggttcagatgaagaacat
aatttaatgaaacaagccaaagtcaacattataaagttagagtcttctgaaagtaaagat
gatgaagagatgtgcgttgaaactgctggtgctcttcactggaaagaggggctagctaaa
aaggcagcagaagcattttttcggcaacagcagatagcgcccaacttgcgcaaacttgtt
tatggcaaagtaatggatgataaagaagaggaagcagaagaggaggagataggtgggctc
ttccacgtcagccgtcctaaggcacagatgaggtgcagagccaatggaatagactgttct
cgctaccctgtagacacagaccgtgattgggattgtgaagaggtgctggactctattagg
gactgctttgttactggaaattgggacaagaatgaagatgctgcaaagctactgcaagaa
gatgatgagctttatggtgactttgaggaccttgagaccggtgaggtacaccaaggggat
actgataaggacaaagaccaatctgatcaggaagatactggaggtgatgaggatgagaaa
gaggaagaagaaaaggagaaagcagaaaaaaatgagcgtttagataaaaagaaacgtcta
aaggagaaatttgatttagagtatgatgagggggaatccacctactttgatgaccttaaa
ggagagatgcaacgccaagcacagttaaaccgaaccgagtttgagaatgtggatgatgag
accagagtgcagtatgagggattccgacctggcatgtatgttcgcattgaaatagagggt
gtgccctgtgaatttatttccaactttgacccaaactaccccatcatccttgggggactt
ggcaatcaggaaggcagtataggatacctgcagatgcgagtaaagaaacatcgatggtac
cagcggattctaaaaacacgtgacccactgattctgtctttaggctggcgtcgttttcag
accattccactttactacgttgaagatcataatggacgtcagcgacttcttaaatacacc
ccacaacacatgcattgtggaggtgccatctggggacccatcactccacagggcacaggt
ttccttgcaatacagtcattagctggaggcaaggctggattccgaattgcagccactggc
gttgttctagacttgaacaaatctgttactatagttaagaagttgaaactaattggtttc
ccatataagatctacaagaacactgcttttattaaggggatgttcaattccattttagag
gtggctaaatttgaaggagcaatcttgcgaacagtaagtgggattcgtgggcagattaaa
aaggccttgcacactcctggggccttccgagcctcttttgaagatcgattgcttatgagt
gatgtagtattcctaaggtcctggtttcctgtgtctgttcctcagttttataatcctgtt
acctcactgcttcagccagtgggtgggaaagataaatggaatgggatgagaacagttggc
caattgcgtcatgaccttcaaatgaatttaccccacaataaagactcgctttataagcca
atcatccgaaagatgcgccacttcaatcccctacacatacccaaggatctacaacggatg
ctgccattcaaaagtaagccaaagctccaagaaaagaaaggcaatgtgccaaaaaatcta
caaagaccagcagtcattaaagagccacatgaaagaaagattgcatcactgttggtggcc
cttggtactgtacataattacaaaaagaaggcagcacaggccaaacatcatgaccagcgt
aagcagtttttcagacagaagcaaggagaggaagctgataagatgaagagacaaaaagaa
gccagaaaaaaaatatacagaataatcggacagaaggagaaaaaaagacagaagtccagc
ctaaagggttctggtcacaaggaataa
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