Polypterus senegalus (gray bichir): 120538644
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Entry
120538644 CDS
T08668
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120538644
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120538644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Arabino_trans_C
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
120538644
NCBI-ProteinID:
XP_039623958
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All DBs
Position
11:841181..948274
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AA seq
678 aa
AA seq
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MMFRDQVGILTGWFKGWNECEQTVALLSLLKRVSRTQARFLQICLEHSLAECTEIHILEN
EANSAAIVSQWNQEPKEKVVSLLLSHLPLLQPRNSDAKCEYMKLLQKVLSYTIESNLFVE
ESRQLLSYALIHPATTLEDRTSLAMWLNHLEEHLSSNYSGRASSSAYHSRQASDEWTNQS
DLMDPGHGWQEKSGTTGQNGHLPFHVSSSVPSAMNSIGSNTNTVLPSQIHPSPLKRSMSL
IPTSPQVSSTEWISQEDLGIRTPYISSDHAPLSPQSSVASSGSEQTEEQGASRNTFQEEG
SGMKDVPTWLKSLRLHKYAALFSQMTYEEMMTLTEQHLESQVCRNVTKGARHKIALSIQK
LRERQSVLKSLEKDILEGGNLRNALQELQQIIITPIKVYSPPQTSQKESDTTSQPSDKSG
KPADEKDSTAEVFSPPNSSPCDGEPSAMPIPEGDITGQFTRVMGKVCTQLLVSRPDEENI
SCYLQLIEKCLAHEAFTETQKKRLLSWKQQVLKLLRMFPRKAMLDMPSYRQKGWTYGSNS
LPTAGSVGGGLGRRGQRQFQMPSRGLPPNRMALMSPSGIGGASPRHTLTSPALGGQGRQN
LWFANPGGSNSMPSQSRSSVQRTHSLPVHTSPQAMLMFQQPECQVPGTDLEINPTLESLC
LSMTEHALGDGMDRTSTI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaagttggcatcctaactggttggttcaaaggctggaatgagtgt
gaacaaacagtggctctcctgtctcttctgaaacgtgtcagtcggactcaggcccgtttt
ctgcagatctgcctcgaacactcgctggccgaatgtactgaaatccatatccttgagaat
gaggcaaacagtgctgcaattgttagccaatggaaccaggagcccaaggagaaggtggtc
tctttacttttatctcacctcccgcttcttcagccacgcaactcagatgccaaatgcgag
tatatgaagctgctacaaaaggtgctcagctatacaatcgaaagcaacctgtttgtggag
gagagtcggcagctgctctcttatgccctcatccaccctgcgactactctagaagaccgc
acctctttagccatgtggcttaaccacctggaagagcacctgtccagcaattactcggga
cgtgcctcctcctctgcctaccactctcgccaagcctctgatgagtggactaatcaatct
gacctcatggacccaggccatggatggcaggaaaagtctggtaccacgggacagaatggc
cacttgccctttcatgtgtcatcctcagtgccgtcagcaatgaacagcattggaagcaat
acgaatactgttctaccaagccaaatccatcctagccctctgaaacggtccatgtccctg
atccccaccagcccacaggtttctagcactgagtggatcagccaggaggacctaggcatc
cgaacgccgtacatttcttcagatcacgctcctctgtcaccgcagagcagtgtggcttct
tcaggcagtgagcagactgaagaacaaggagccagccgaaacacctttcaggaagagggc
agtggtatgaaagatgtcccgacatggctaaaaagtcttcggcttcataaatatgcagct
ctgttctcccagatgacatacgaggaaatgatgacactcacggagcaacaccttgagtca
caggtttgcaggaatgtcacaaaaggagctcggcataaaatagccttaagtatccagaaa
ctgagagagcgacagagcgtcttaaagtctttagaaaaggatattcttgaagggggtaat
cttcgaaatgcacttcaggaactgcaacagataataattacacctattaaggtatatagt
ccaccacagacgtctcagaaagagagtgacaccacatcacagccttcagacaaatctgga
aaaccagcagatgaaaaggattctacagccgaggtgttttcgcccccaaactcctctcct
tgtgatggtgagccctctgcaatgccaataccagaaggagatataacggggcagtttaca
agggtgatgggcaaagtgtgcacgcaactcttagtatcaagaccagatgaagagaacatc
agctgttacttgcagctcatagaaaagtgtctagcacatgaggcttttactgaaactcag
aagaaaaggttgctgtcttggaagcagcaagtcttgaaactactaagaatgtttcctcgg
aaagccatgcttgacatgccaagttaccgacaaaaagggtggacatatgggtcaaattct
cttcctacagcaggctctgtgggaggtgggttaggacgccgaggacagcgacagtttcaa
atgccttcccgtgggctgccacccaatcgtatggccctcatgagtccttctggcattggg
ggtgcttcacctaggcacacattaactagtcctgctcttggagggcagggcaggcagaat
ttgtggtttgccaacccaggtgggagcaacagcatgccaagtcagagccgcagctcggtc
cagagaacacactctctacccgtccatacgtccccccaagccatgctcatgttccagcag
ccagaatgccaggttccgggaacagatttggaaattaatcccacgctggagtcactgtgc
ctcagcatgacagagcatgcattaggagatggaatggatcggacgtcaacgatctaa
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