Polypterus senegalus (gray bichir): 120538694
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Entry
120538694 CDS
T08668
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
psex04140
Autophagy - animal
psex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120538694 (hif1al)
04137 Mitophagy - animal
120538694 (hif1al)
04148 Efferocytosis
120538694 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120538694 (hif1al)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120538694 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
PAS_2
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
120538694
NCBI-ProteinID:
XP_039624025
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Position
11:complement(16617767..16707217)
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AA seq
635 aa
AA seq
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MEVETEAKRPRSELRKERSRDAARSRRSQETEVFYQLAHTLPLPRGVTSHLDKAAIMRLT
LSFLRMKRILQNDSFREAEDDIDGYYLNAIAGFVMVLSSEGDLIYLSENVSKHLGVPQLE
LVGQSIFDFVHPCDQEELRDILTSRHGYSKKKNSQNQDIQTERNFFLRMKSTLTSNGRTV
NLKSATWKVLQCSGHLRTYHTEEDSTKEGFTQIPLTCLTLICEPVPQPSTIDFPLDSRTF
QSRHTMDLKYTHCEDRVFELLGYQPEDLIGRSAYEYHHALDSDHITKSFHILLSKGQMST
GHYRFLAKNGGFAWAETCATVLYNRKSSQPEGVICLTFILSGLEETEIVFSVEQTLRIMK
LKKEPGSLDEDENKENCLFLKTSETTEEHTGMATALENNSVPLPDYAQPKDLSFSRAPND
SLPESPQDLCTPELRQLLAPIFEKSVNEDSGIGSPPSTFMSSPRSVDEQAFDMDEIEKFF
ANKKESEMAAYAGVPQDEPLDLDMLAPYISMDDDFQLNFLSHLPEPLSPNADSHTLSGSN
AKKRALEEEDDLSSKKMAWEKPDLDSEGEPVLLKDALLGCMVDDDDQDSLMMVNQTKSIL
DAGDSLDGVRSLCHSAALMSVFLTNSQMDDGDCLT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgaaacagaagcaaaaaggccacgttcagagctgcggaaagagcgctcacgt
gatgcagctcgctcccgccgtagccaagagacggaggtcttctaccagttggcgcatacg
ctacccctgcctcggggtgtgacttctcacctggataaggctgccatcatgaggctgact
ctgagctttctacgcatgaagcgcattttgcagaatgattccttccgagaagcagaagac
gatatagatggttactacttaaatgccattgcaggatttgtaatggttctgtcctctgag
ggtgacctgatctatttatctgaaaatgtcagcaagcatcttggtgtgccacagctggag
ttggtaggtcaaagtatttttgactttgtacacccttgtgaccaggaggaacttcgggat
atcctgacttcaagacacggctactcaaagaaaaagaattctcagaatcaggatattcag
actgaaagaaatttcttcttaagaatgaagagtactctaaccagtaatggccgtacagtg
aatcttaaatcagcaacatggaaggtacttcagtgttctggacatctacgcacttaccac
actgaagaggattctacaaaagaaggcttcactcagatacctctcacctgccttacgttg
atttgtgagcctgtcccacaaccgtccactattgattttcccctggacagcagaactttt
caaagccgtcataccatggatcttaagtatacacattgcgaagacagagtctttgagttg
ctgggttatcagccagaggatctgattggacggtctgcctatgagtatcatcatgccctt
gactctgatcacataaccaagagcttccacatcttgctttctaaaggccagatgtccact
gggcactatcgcttccttgccaagaatggtggttttgcatgggccgaaacttgtgcaaca
gtcttgtacaacagaaagagttcccagccagaaggggtgatctgtttgactttcatacta
agtggcctggaggagacagagattgttttctcagttgagcagactttacgaattatgaag
ctgaagaaggagcctggcagcctcgatgaagatgaaaataaagaaaattgtctcttcctg
aaaacgagcgagactacagaggagcatacaggaatggccacagccttagaaaataacagc
gtgcctcttccagattatgcacagcccaaggacttgtctttctcccgggctcccaatgat
tctttgcccgagtctccccaagacctgtgcacccctgaactccgacagttgcttgctcca
atctttgaaaagagtgtcaatgaggattctggaattgggtctccacccagcacatttatg
tcatctccgagaagtgttgatgaacaggcttttgatatggatgaaattgaaaagtttttt
gctaacaaaaaggagagtgaaatggcagcatatgcaggagttccacaggacgagcctttg
gatctggacatgctggccccctacatctctatggatgatgatttccagcttaactttttg
agtcaccttcctgaacctctatctccaaatgcagattcacacactcttagtggaagtaat
gcaaaaaaacgagctctggaagaagaggatgatttaagttcaaaaaagatggcgtgggaa
aaaccagacctagattcagaaggtgaaccagtgctgctgaaagatgctcttctgggctgc
atggtagatgatgatgatcaggacagtttgatgatggtcaatcaaaccaaaagcattttg
gatgctggcgattcattagatggagtgagaagcttatgccattctgcagcattgatgagc
gtgttcctgaccaatagccagatggatgatggggattgtttgacctga
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