Polypterus senegalus (gray bichir): 120538711
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Entry
120538711 CDS
T08668
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120538711 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120538711 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120538711 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
psex03029
]
120538711 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120538711 (si:ch211-11n16.2)
Membrane trafficking [BR:
psex04131
]
Autophagy
Other autophagy associated proteins
Others
120538711 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
120538711 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
GBP
Motif
Other DBs
NCBI-GeneID:
120538711
NCBI-ProteinID:
XP_039624056
LinkDB
All DBs
Position
11:19224734..19301006
Genome browser
AA seq
644 aa
AA seq
DB search
MSDLPLRQQDELRSPPARKGLARESFLLLNESETLQVKNEAEFLDMLDCHTVDSIKVLSI
FGNTGDGKSHTLNHCLFGGKELFPTSPLQDSCTVGIWAAYEPKLRLIVLDTEGLLGATAN
LNQRMRLLLKVLAVSDVVVYRTRAERLHNDMFQFLGNASSAYLRYFTPELRAVSNRCGLE
VPLSSLGPAVVVFQETTRTNVLGSESDSPGQADILLQKRFHDLGLTTEAFNSVQYVGVQT
IIPPTDYSGLHAAIQYQVKNTTTRSPRHPSIVFSALKALSERFCGEIPDERLNLYSFFPD
EYFTCSCVCLSCGVRCKNGMNHLKDHIPHVADGLCQYTHQFNNKVLICKKCYEGGREMIV
IPKTSAASDNPWIGLAKYAWSGYVLECSNCGIIYRSRQYWMGNQDPESSVVRSEVRHVWP
GNETFSINHQNAGRRVLDGVNFVIQSVTEYSSGPSKAVTAWLTDQVAPPYWKPNADILVC
KGCRKRFAPSERKHHCRSCGEGFCQDCSSKTMPVPERGWGSVSVRVCNACYQQGPRISKE
SKVEPTGLIARKVTEVAQSTLDFVSTAVEYPLGFVKEVARPDYWVPDNEIVKCHNCSIPF
TPMMSKHHCRSCGQGVCDHCSTKRRPVPSRGWDHPVRICDECCS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctgcctttgcggcagcaggacgagcttcgaagcccgccggcgagaaaaggc
ttagcgcgagagagtttcctgctgctgaacgagagcgagactttacaggtgaagaatgaa
gcagagttcctggacatgctggactgccatactgtggacagtatcaaggtcctttccatc
tttggcaatacaggtgacggcaagtcccacacactaaatcactgcctctttggaggcaaa
gagctgtttcctacttctccactacaagattcttgcactgttggaatatgggcagcatat
gaacccaaactgaggctgattgtcctggacaccgaaggcctgcttggagctacagccaac
ctgaaccaacgtatgaggctgctgctaaaagtgcttgctgtgtcagatgtggtagtgtat
cgcacacgggctgagcgtttacataatgacatgttccagttccttggcaatgcttctagt
gcttaccttcgttatttcacccctgagttacgtgctgtgtccaatcgctgtggcttagag
gtaccattgtctagtcttggcccagcagttgtggtgtttcaggagacaacacgtacaaac
gtacttggctctgagagtgacagccccggccaagcagacatcctactgcagaaacgcttc
catgatcttggtctaacgactgaggcatttaactcggtgcagtatgtaggtgtgcagact
attataccaccaacagactactcagggcttcatgctgccatccaataccaagtaaagaac
acaaccactcgctcgcctagacatccttccattgttttcagtgcattgaaggcacttagc
gagcgattttgtggggaaataccagatgagcgactgaacctgtattctttctttcctgat
gagtatttcacatgctcatgtgtctgtcttagctgtggagttcgctgcaagaatggcatg
aatcatctcaaagatcacattcctcatgtagcggatggcttgtgccagtacacacaccaa
tttaacaacaaggtgctcatctgtaagaaatgctacgaaggaggaagggagatgatagtg
attccaaaaacatcagccgcaagtgacaacccctggattggattagcaaagtatgcctgg
tctggatatgtgcttgagtgttccaactgtggaattatttatcgcagtagacagtactgg
atggggaatcaggatccagaaagcagtgttgtgcggtcagaagttaggcatgtctggcct
gggaatgaaacattttcaataaatcatcaaaacgctgggagacgtgtgttagatggggtt
aactttgtgatccagtcagtgactgaatatagctctggaccaagtaaagctgtaacagcc
tggcttactgaccaagtggcacccccctactggaaaccaaacgcagacatattggtttgt
aaaggctgcagaaaacgctttgcgccatccgaaaggaaacaccactgccgttcctgtgga
gaaggcttctgccaagattgttctagcaagaccatgccagtgcctgagagaggctggggg
agtgtgtcagttcgggtttgtaatgcctgctaccaacaaggaccaagaatctccaaggag
tctaaggtggagccaacagggctgattgcacgaaaggttacagaggtggcacagagcaca
ctagactttgtttcaacagcagtggagtatccacttgggtttgttaaggaagtggcgaga
cctgattattgggtgccagacaatgagatcgtaaagtgtcacaactgctccatacccttc
acaccaatgatgtctaagcaccactgtcggtcctgtggtcaaggtgtctgtgaccattgc
tccactaaacggcgcccagtgccttctcgtggttgggaccaccctgtccgaatctgtgat
gaatgctgttcatag
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