Polypterus senegalus (gray bichir): 120538737
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Entry
120538737 CDS
T08668
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120538737
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120538737
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120538737
Intermediate filaments
Intermediate filament-binding proteins
120538737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH
PH_9
CAMSAP_CH
SLATT_6
PH_11
Motif
Other DBs
NCBI-GeneID:
120538737
NCBI-ProteinID:
XP_039624096
LinkDB
All DBs
Position
11:22684351..23146231
Genome browser
AA seq
2576 aa
AA seq
DB search
MASTTTDLDNADVQRQFNNNNRPANTTEQAWDSESTTAKLFECSRIKALADERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEQLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIATEDNRETRSAKDAL
LLWCQMKTAGYSEVNIQNFTTSWRDGLAFNALIHRHRPDLIEFSKLAKSNTMHNLQQAFN
IAEQHLGLTKLLDPEDVNTENPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDNALE
TEKIIERYDALASDLLEWIEKTISIISNQKFANSLLGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPSDGKLISDINKAWERLDKAEHERGVALRTELIRQEK
LELLAQRFDHKATMREAWLSENQRLVSQDNFGYDLSAVEAAMKKHEAIEADISSYEERIS
VIVELASEMETENYYDICRITAQKDNILRQWALLKELVSGRRGRLEKNLSLQKTFQEMVY
MIDWMEEMQVKLLSKDYGKHLLEVEDLLQKHGLLEADISVQAERVQTFNVAALKFTNMEG
YQPCDPQVICNRVNHVNTCLEELKQLGTKRRTELEESRQLWTFFQQMEESEAWIREKNAI
LATQTFGKDLTSILELLNKHKIMAGELLGRRSLLQHTMKKGKQILNKKCFGTGKIQEKIM
DVKAQWKKLEDHASLRLHRLQEALNFFQFNAETDDLLAWLQDTYRLVSSEDFGHDEYSTK
SLMKKHKSVVGEIEKHRLNVVALRKHMVSLSVQYRELDEVQNRLGEVEQLYTEVVDVAVL
RQQWLHDALAVYRMFSEVHACEVWIDEKEQWLNKMAIPERLEDVEVVAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSSEVRGCQDHLNGRWNRIVELVEQKKDHLNSVLRIQNY
LLECTEIKSQIQEKRKAIETIQYTGSDLGGVLALQRKLSTMEGALTVLEPKLILLQQEAE
ELVTAHPNQALEILVQFEDIGVEWEELKRMLQGCEDSLTVARRLQQFIQDLDNFLTWLVQ
TQTAVASEVLPSNLEEAELLINQHATLKEEIGRYEEDYNRIQDVNKLLTLEETELPYISL
QQWLQKLDVGWNKLLDAWESRREVLVQSHIFHLFLRDVKQAESFLNNQESVLAHVKHPTT
VESVEAAIKKHKDFTTTMELNLQKIKTVVEAGESLIIQGNIYSERIRERIDTISNRSKQN
AAMAETWLQKLNVHLELQKFLQSCQELDDWVTEKMLMARDTSRDEAQKLHKKWLKHQTFM
AELAQNKEWLEKIEKEGQQLIQEKPELSSVVQRKLKEIRECWQELESTTQAKARELFEAN
KADLLVKSYSDLDHRLTHLEGQLNQVDQGQDLISVNKQLKKLQSMESQMEDWYKEVGELQ
VQASSIPQQGLIKDNVNDKQNMVETRIVRLIEPLKERRRILLASKEVHQVTRDLEDEIIW
IEERLPLATSKEHGSSLQAVQQLMKKNQSLQREIIGHQSRMEDVLDRAGLIASIRSPEAD
CVRASLDCLRQLWDMLRSETECRQRMLDGMYQAQQYYFDVTEVEAWLSEQELHMMNEEMG
KDEASTLQFLKKHLVIEQTIEDYAETIGLLSQQCRSLLEMGHPESEQVSKRQSQIDRLYV
SLKDLVEERKGKLEQQYWLYQLNREVDELEHWIAEREVVAGSPELGQDCEHVLMLQEKFT
KFATETGTLGQERVSAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKYFADCREVLVQIEDKQKRLPEVRARQGGTANTSTLQRLMHSFEHELQLLVTQ
VRQLQESAAQLRTVYAGEKADAIVAKEQEVMQAWKELLTSCEECRLQITTSTDKLRFFGV
VRDLVSWMDGIICQIGTGEKPRDVSSVEVLMNYHQGLKNEIEARNKSVMQCVEMGKTLLA
ARNPAAEEIKDKLEKLLAKQKELLEKWDKHWEWLKHMLEVNQFAQEAVVAEAWLTAQEPF
IRSQELGNSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTLEKLKAEQGKQPPTPLLG
RKVFMDPQEPTSARASSSLLRQTIYEQTEPKDDRLVEPVLSAHKLGSTASSYTPVMNGTK
YGGLELRNEPKIAYVRQELKPERLQPKIDILQDGVQSALTARQVGQEAPRKDDTKGPTAA
ELQVQQVSRHQDLTDGKVSQSEPHSEQKKRERERRLERQTSSEQEVQARLDELPQERRRE
RYERRLERQTSSEQEVQKKTEEHPQERRRDRHERRLERQESSEQETARDQSEKKAAGEKR
STLADIVEQLQEREAAQLQSQSREREGPPRLPNGLPERTPRPDRPRARDRPKPRRRPRPK
DPNAPPGEARRSRSAPAQSSSALPPLPPTHTAQHEGTLFRKHEVESQKKASNRSWVSLYC
TISNGEMGFYKDAKNTASTYNGEPLLSLQNCACEVANAYKKKKNVFKLKTKEGSEFLFHA
KDEEELKKWIEAISMAISEHEEIAKWAQSLPTTSSTDEGNTQRAGERRMSVSAKKK
NT seq
7731 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacaactactgaccttgacaatgctgatgtccagaggcagttcaacaacaac
aatcgaccagccaacacaacggagcaggcctgggacagtgaaagcactaccgccaaactt
tttgagtgttccaggatcaaagcactggcagatgaacgtgacgcagtacagaagaagaca
tttacaaaatgggtgaattctcacttggcacgggtttcttgtcgaatagcagacctgtac
aatgatctacgcgatggatatatgctgaccagactgctagaagtattgtctggggaacaa
ctgccaaaaccaacacgaggccgcatgaggatccactgcttagagaatgtggacaaagcc
ttgcagttccttaaagaacaacgtgtacatctggagaatgtgggatcacatgacattgta
gatggtaatcacagactcacccttggcctcatctggaccattattctacgtttccagatt
caggtcataaaaattgcaactgaagacaatcgtgagactcgttctgcaaaggacgctctc
ctcttatggtgtcagatgaaaactgcagggtattcagaagtaaatatccaaaattttact
actagctggagagatggcctggcctttaatgctcttatccatagacacaggccagatctg
attgaattcagcaaactggctaaatcaaatacaatgcacaatttacaacaggcttttaac
atagcagagcaacatttggggttgaccaagctccttgatcctgaagatgtaaatacagaa
aatcctgatgagaagtcaatcatcacatacgtggtttctttctatcattacttctccaaa
atgaaagcactggcagttgaagggaagaggattggaaaggtcttggataatgccctagaa
acagaaaagattattgaacggtatgatgctttggcatctgacctgctcgagtggattgag
aagacaattagtatcataagtaaccagaaatttgccaattctctacttggagttcagcaa
caattacaggcatttaccacctactgcaccattgagaaacctatcaaatttcaagagaaa
ggaaatttagaggtcctcctttttacaattcagagcaagctgagagccaacaaccagaaa
ccctatgtacccagtgatggaaaactcatctcagatatcaacaaggcgtgggagaggctg
gataaggccgagcatgaacgtggggtggctcttcggactgagctgatacggcaagaaaag
ctggagcttctggctcaacgttttgatcacaaggctactatgagggaggcctggctttca
gagaatcaaagacttgtatctcaggacaattttggctatgatctatcagcggtggaggca
gcaatgaagaaacatgaggcgattgaggctgatatttcctcctatgaagaaaggatcagt
gtcattgttgaacttgcttctgaaatggagacagagaactattatgatatatgtcgcatc
actgctcagaaggacaatatactacgacaatgggctcttctgaaggaattagtgagtggt
cgaagagggcgacttgagaagaaccttagtctgcagaaaacctttcaggagatggtctat
atgattgattggatggaagaaatgcaggtgaagttgctatcaaaggactatgggaaacac
ttgttggaagttgaagatttgcttcagaaacatggcctgctagaagctgatatatcagta
caggctgaacgtgtgcagacatttaatgtggcagctctcaaattcacaaatatggaaggt
tatcagccgtgtgacccccaagtcatctgtaacagggtcaatcacgtcaacacttgccta
gaggaactgaaacaattgggaacaaagcggcgcacagagcttgaggagtctcgtcagctc
tggactttttttcagcagatggaagagtccgaagcctggatcagggaaaagaatgctatt
ttggcaacacagacatttggaaaggatctgaccagcatcctagagctactcaataagcat
aaaattatggcgggagaacttctgggacggcgatccctcctgcaacacaccatgaaaaaa
ggcaagcaaattttaaataagaaatgttttgggacaggaaagatccaggagaagatcatg
gatgtgaaggcacaatggaagaaattggaagaccatgcaagcttgaggttgcacaggctt
caggaggcccttaatttctttcaattcaatgctgaaactgatgacctcctggcctggttg
caagacacctaccgattagtctccagtgaggattttggccatgatgagtactcaaccaaa
tctctgatgaagaagcacaagagtgtagtgggggagattgagaaacatcgtctcaatgtt
gttgcacttaggaaacacatggttagcctgtcagtgcagtatcgggaactggatgaagtc
cagaacagactgggagaagtcgagcagttgtacactgaggtggtggatgtggcagtactc
agacagcagtggctacatgatgccctagctgtatatcggatgttcagcgaggtccatgca
tgtgaagtttggattgacgagaaagagcaatggctgaacaagatggccatcccagagaga
ctagaagatgtggaggtggtggcacacaggtttgaaagtctggaccaggaaatgaacagc
ctaatgggcagaatcttggatgttaatcagattgtccagcagttgctagacagtggacac
cccagttcttcggaggtccgtggctgccaggatcatcttaatggaaggtggaatcgtatt
gtggaactggtagaacaaaagaaagatcatcttaactctgtcttgcgtatccaaaattac
ttgctggagtgtactgagattaagtctcagatccaagagaaacgtaaagctattgaaacc
atacagtacactggcagtgacctgggaggtgttctagcacttcagcgaaagctgtctacg
atggaaggtgctttgactgttttagaacccaagctgatcttgctccagcaggaggcagaa
gaactggttactgcacatccaaatcaagctcttgaaatcctggtgcagtttgaggacatt
ggagttgaatgggaagagcttaagaggatgttgcaaggctgcgaggattcacttacagtg
gctcgaaggcttcaacaattcattcaagacctggacaacttcttgacctggctggtccaa
acccagactgctgtggcttcagaagtcctaccaagtaacctggaggaagctgaattgctt
atcaatcaacatgccactctgaaggaagaaattggtcggtatgaggaggactataatcgc
atccaggatgtcaataagctgttgacattggaggaaacagaattaccgtacatctccctt
cagcaatggctacaaaagttagatgttggctggaacaaacttttggatgcttgggaaagt
cgtcgagaggttcttgtgcagtcacacatctttcatcttttccttcgcgatgtgaaacaa
gcagaatcttttcttaataaccaggagtcggtgctggcccatgtgaagcatccaactaca
gtggagtctgtagaagcagcaatcaagaaacacaaggacttcaccaccaccatggaatta
aatctgcagaagattaagactgttgttgaggcaggggaaagcctcatcattcagggtaat
atctactctgagagaattagagaaaggattgataccatctccaacaggagtaagcagaat
gcagccatggccgaaacttggcttcaaaagctgaacgttcacttagagttacagaagttt
ctgcagagttgtcaagagctggatgactgggtcacggagaagatgctaatggcacgagat
acctctcgagacgaggcacaaaaactgcacaagaaatggctcaagcatcagactttcatg
gccgaactggcccaaaacaaggagtggctggaaaaaatcgaaaaggaaggtcaacagctg
atccaggagaagccagaactgtcctctgttgtgcagagaaagctaaaagagattcgagaa
tgctggcaggagttggagtccaccacacaagccaaggcacgggaactttttgaggctaat
aaagcagatttgttagtgaaaagctactcagatttagaccaccgcctcacccatctggaa
ggccagctgaaccaagtggaccaggggcaggatctcatcagtgttaataaacagctgaag
aaactacagagtatggagtcccagatggaagactggtataaggaggtgggagagcttcag
gtacaagcatcctccatccctcagcaaggacttattaaggacaatgttaatgataagcag
aatatggtggagacaagaattgtaaggctcatcgagccccttaaagaaagacgacgtatt
cttttagcgtctaaggaggtccaccaggtgacccgtgaccttgaggatgaaattatctgg
attgaggagcggctgccattggcaacatctaaggagcatgggagcagtttgcaagctgtc
cagcagctgatgaagaaaaaccagtctctgcagcgtgagatcataggacatcagtcgagg
atggaagacgtgctggacagagcaggcctcattgcctcaatccgcagtccagaggcagac
tgtgtgcgagctagcttggactgtctacgtcagttgtgggatatgctgcgctcagaaact
gagtgcaggcagagaatgctggatggaatgtaccaagcacagcaatactactttgacgtg
acagaagtggaggcttggctcagtgaacaagaactgcacatgatgaatgaagagatggga
aaggatgaggccagcacccttcagttcttgaagaagcatcttgttattgaacaaacaatt
gaggactacgctgaaactattggcctgctgtcccaacagtgccgctccctgcttgagatg
gggcaccctgaaagtgagcaggtcagcaagcgtcagtcccagattgatcgactctatgtc
tccctcaaagacctggtagaagagcgcaaaggaaagttggaacaacagtattggctctac
cagttgaaccgtgaggtagatgaactagagcattggattgcggagcgtgaagtggtggct
ggatcgccggagcttggccaggactgtgaacacgtcttaatgctccaagaaaagtttaca
aagtttgccacagaaacgggaaccctggggcaggagcgggtatcagctgtgaatcagatg
gtggatgagctgatcgactatggacattcggatgcagcaacaattgcggagtggaaggat
ggtgttaatgaggcctgggcagacttgttggaattaatggagacgcgtgcccaaatgctg
gctgcatcccaccaactacacaagtattttgctgattgccgagaggtgctggttcaaatt
gaagacaaacagaagcgcctgccagaggtgcgcgctcgccaaggagggactgcaaatacc
agcactctgcagaggctcatgcacagctttgaacatgaactccagttgcttgtcacccag
gtgcgccaactccaggagagtgcagcccagttgcgtactgtctatgctggtgaaaaagca
gacgccattgtagcgaaagagcaagaagtaatgcaggcctggaaagagctgctgacatcc
tgtgaagaatgcagacttcaaatcaccacatcaactgacaaactgcgattctttggggta
gtacgggacctggtttcttggatggatggtatcatctgtcagattggcaccggtgaaaag
ccaagagatgtgtcgtcagtggaggtgctgatgaattaccaccagggcttaaagaatgag
attgaggcccgcaataagagcgtaatgcagtgtgtggagatggggaagacgctcttggca
gccaggaacccagcagcagaggagattaaagataaactggagaagcttctggcaaaacag
aaggagctactggagaagtgggacaagcactgggaatggctgaagcacatgctagaggtc
aatcagtttgcccaggaggcagttgtggcagaagcctggcttactgctcaagaacctttt
atccgtagccaagagttgggcaacagtgtggatgaagtggaacagctgattcggcgacat
gaggcctttcggaaagctgctgccacctgggaggagcgtttcagttctttacgacgcctc
accacgctagagaaattaaaagcagagcaaggcaagcaacccccaactccattactgggg
cgcaaagtatttatggatccccaagagcctacatcagcaagggcatcttcttctcttcta
cggcagacaatctatgaacaaactgaacctaaggatgacagattagtagaacctgttttg
tctgcccacaagctgggaagtactgcttcatcttatactccagtgatgaatgggacaaaa
tatggaggtctggaactccgaaatgaaccaaagattgcctatgttcggcaagaattaaag
ccagagcgcctacagcctaagattgacattcttcaagatggtgtgcaatcagccttgaca
gcaaggcaagtggggcaagaagcccctcggaaagatgacaccaaaggtccaactgctgct
gagctccaagtccagcaggttagtagacatcaggatctcactgatggaaaagtcagtcag
tcagagcctcacagtgaacagaagaaaagagaacgagaaaggaggctggaaaggcagaca
tccagtgaacaagaagttcaagctaggcttgatgagcttcctcaggaaagacggcgggaa
aggtatgagcgaaggttagaaagacagacatcaagtgaacaagaagttcaaaagaagact
gaagaacaccctcaggaaaggagaagagaccgacacgagcgccgactggaaaggcaggaa
tcaagtgaacaggagacagccagagaccagtctgagaagaaagctgcaggggagaagagg
tcgacattggcagatattgtggaacagctacaggagagagaagctgcccaattacagtct
cagagtagagagagagaaggacctccacgtctcccgaatgggctacctgagcgaacacct
cgccccgaccggcctcgagcccgggaccgacctaaacctcgtaggcggccaaggccgaag
gacccaaacgcaccaccaggagaggccagacgatctcgttcagcaccagcccagagcagc
tcggctctgcctcccctccctcccacccatacagcccagcatgaggggactctgttccga
aagcatgaagtcgagagccagaagaaggcttcaaacaggtcctgggtgagcctctactgc
acaatttctaatggtgaaatgggattttacaaggacgccaaaaacacagcttccacttat
aatggagagccacttcttagccttcaaaactgtgcttgtgaagttgcaaatgcttacaaa
aagaagaagaatgtcttcaaattaaaaacaaaagaaggtagtgaattccttttccatgca
aaagatgaggaggagcttaagaaatggattgaggcgatatcaatggccatttcagaacat
gaagaaattgcaaaatgggcacagagcctgcctactacctcttcaacagatgaaggcaac
acacagagagcgggagaacgacgcatgagtgtttctgcgaaaaagaaatga
DBGET
integrated database retrieval system
