Polypterus senegalus (gray bichir): 120538737
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Entry
120538737 CDS
T08668
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04517
IgSF CAM signaling
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120538737
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120538737
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120538737
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120538737
Intermediate filaments
Intermediate filament-binding proteins
120538737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH
PH_9
CAMSAP_CH
Helical_needle
Motif
Other DBs
NCBI-GeneID:
120538737
NCBI-ProteinID:
XP_039624096
LinkDB
All DBs
Position
11:22684351..23146231
Genome browser
AA seq
2576 aa
AA seq
DB search
MASTTTDLDNADVQRQFNNNNRPANTTEQAWDSESTTAKLFECSRIKALADERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEQLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIATEDNRETRSAKDAL
LLWCQMKTAGYSEVNIQNFTTSWRDGLAFNALIHRHRPDLIEFSKLAKSNTMHNLQQAFN
IAEQHLGLTKLLDPEDVNTENPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDNALE
TEKIIERYDALASDLLEWIEKTISIISNQKFANSLLGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPSDGKLISDINKAWERLDKAEHERGVALRTELIRQEK
LELLAQRFDHKATMREAWLSENQRLVSQDNFGYDLSAVEAAMKKHEAIEADISSYEERIS
VIVELASEMETENYYDICRITAQKDNILRQWALLKELVSGRRGRLEKNLSLQKTFQEMVY
MIDWMEEMQVKLLSKDYGKHLLEVEDLLQKHGLLEADISVQAERVQTFNVAALKFTNMEG
YQPCDPQVICNRVNHVNTCLEELKQLGTKRRTELEESRQLWTFFQQMEESEAWIREKNAI
LATQTFGKDLTSILELLNKHKIMAGELLGRRSLLQHTMKKGKQILNKKCFGTGKIQEKIM
DVKAQWKKLEDHASLRLHRLQEALNFFQFNAETDDLLAWLQDTYRLVSSEDFGHDEYSTK
SLMKKHKSVVGEIEKHRLNVVALRKHMVSLSVQYRELDEVQNRLGEVEQLYTEVVDVAVL
RQQWLHDALAVYRMFSEVHACEVWIDEKEQWLNKMAIPERLEDVEVVAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSSEVRGCQDHLNGRWNRIVELVEQKKDHLNSVLRIQNY
LLECTEIKSQIQEKRKAIETIQYTGSDLGGVLALQRKLSTMEGALTVLEPKLILLQQEAE
ELVTAHPNQALEILVQFEDIGVEWEELKRMLQGCEDSLTVARRLQQFIQDLDNFLTWLVQ
TQTAVASEVLPSNLEEAELLINQHATLKEEIGRYEEDYNRIQDVNKLLTLEETELPYISL
QQWLQKLDVGWNKLLDAWESRREVLVQSHIFHLFLRDVKQAESFLNNQESVLAHVKHPTT
VESVEAAIKKHKDFTTTMELNLQKIKTVVEAGESLIIQGNIYSERIRERIDTISNRSKQN
AAMAETWLQKLNVHLELQKFLQSCQELDDWVTEKMLMARDTSRDEAQKLHKKWLKHQTFM
AELAQNKEWLEKIEKEGQQLIQEKPELSSVVQRKLKEIRECWQELESTTQAKARELFEAN
KADLLVKSYSDLDHRLTHLEGQLNQVDQGQDLISVNKQLKKLQSMESQMEDWYKEVGELQ
VQASSIPQQGLIKDNVNDKQNMVETRIVRLIEPLKERRRILLASKEVHQVTRDLEDEIIW
IEERLPLATSKEHGSSLQAVQQLMKKNQSLQREIIGHQSRMEDVLDRAGLIASIRSPEAD
CVRASLDCLRQLWDMLRSETECRQRMLDGMYQAQQYYFDVTEVEAWLSEQELHMMNEEMG
KDEASTLQFLKKHLVIEQTIEDYAETIGLLSQQCRSLLEMGHPESEQVSKRQSQIDRLYV
SLKDLVEERKGKLEQQYWLYQLNREVDELEHWIAEREVVAGSPELGQDCEHVLMLQEKFT
KFATETGTLGQERVSAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKYFADCREVLVQIEDKQKRLPEVRARQGGTANTSTLQRLMHSFEHELQLLVTQ
VRQLQESAAQLRTVYAGEKADAIVAKEQEVMQAWKELLTSCEECRLQITTSTDKLRFFGV
VRDLVSWMDGIICQIGTGEKPRDVSSVEVLMNYHQGLKNEIEARNKSVMQCVEMGKTLLA
ARNPAAEEIKDKLEKLLAKQKELLEKWDKHWEWLKHMLEVNQFAQEAVVAEAWLTAQEPF
IRSQELGNSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTLEKLKAEQGKQPPTPLLG
RKVFMDPQEPTSARASSSLLRQTIYEQTEPKDDRLVEPVLSAHKLGSTASSYTPVMNGTK
YGGLELRNEPKIAYVRQELKPERLQPKIDILQDGVQSALTARQVGQEAPRKDDTKGPTAA
ELQVQQVSRHQDLTDGKVSQSEPHSEQKKRERERRLERQTSSEQEVQARLDELPQERRRE
RYERRLERQTSSEQEVQKKTEEHPQERRRDRHERRLERQESSEQETARDQSEKKAAGEKR
STLADIVEQLQEREAAQLQSQSREREGPPRLPNGLPERTPRPDRPRARDRPKPRRRPRPK
DPNAPPGEARRSRSAPAQSSSALPPLPPTHTAQHEGTLFRKHEVESQKKASNRSWVSLYC
TISNGEMGFYKDAKNTASTYNGEPLLSLQNCACEVANAYKKKKNVFKLKTKEGSEFLFHA
KDEEELKKWIEAISMAISEHEEIAKWAQSLPTTSSTDEGNTQRAGERRMSVSAKKK
NT seq
7731 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacaactactgaccttgacaatgctgatgtccagaggcagttcaacaacaac
aatcgaccagccaacacaacggagcaggcctgggacagtgaaagcactaccgccaaactt
tttgagtgttccaggatcaaagcactggcagatgaacgtgacgcagtacagaagaagaca
tttacaaaatgggtgaattctcacttggcacgggtttcttgtcgaatagcagacctgtac
aatgatctacgcgatggatatatgctgaccagactgctagaagtattgtctggggaacaa
ctgccaaaaccaacacgaggccgcatgaggatccactgcttagagaatgtggacaaagcc
ttgcagttccttaaagaacaacgtgtacatctggagaatgtgggatcacatgacattgta
gatggtaatcacagactcacccttggcctcatctggaccattattctacgtttccagatt
caggtcataaaaattgcaactgaagacaatcgtgagactcgttctgcaaaggacgctctc
ctcttatggtgtcagatgaaaactgcagggtattcagaagtaaatatccaaaattttact
actagctggagagatggcctggcctttaatgctcttatccatagacacaggccagatctg
attgaattcagcaaactggctaaatcaaatacaatgcacaatttacaacaggcttttaac
atagcagagcaacatttggggttgaccaagctccttgatcctgaagatgtaaatacagaa
aatcctgatgagaagtcaatcatcacatacgtggtttctttctatcattacttctccaaa
atgaaagcactggcagttgaagggaagaggattggaaaggtcttggataatgccctagaa
acagaaaagattattgaacggtatgatgctttggcatctgacctgctcgagtggattgag
aagacaattagtatcataagtaaccagaaatttgccaattctctacttggagttcagcaa
caattacaggcatttaccacctactgcaccattgagaaacctatcaaatttcaagagaaa
ggaaatttagaggtcctcctttttacaattcagagcaagctgagagccaacaaccagaaa
ccctatgtacccagtgatggaaaactcatctcagatatcaacaaggcgtgggagaggctg
gataaggccgagcatgaacgtggggtggctcttcggactgagctgatacggcaagaaaag
ctggagcttctggctcaacgttttgatcacaaggctactatgagggaggcctggctttca
gagaatcaaagacttgtatctcaggacaattttggctatgatctatcagcggtggaggca
gcaatgaagaaacatgaggcgattgaggctgatatttcctcctatgaagaaaggatcagt
gtcattgttgaacttgcttctgaaatggagacagagaactattatgatatatgtcgcatc
actgctcagaaggacaatatactacgacaatgggctcttctgaaggaattagtgagtggt
cgaagagggcgacttgagaagaaccttagtctgcagaaaacctttcaggagatggtctat
atgattgattggatggaagaaatgcaggtgaagttgctatcaaaggactatgggaaacac
ttgttggaagttgaagatttgcttcagaaacatggcctgctagaagctgatatatcagta
caggctgaacgtgtgcagacatttaatgtggcagctctcaaattcacaaatatggaaggt
tatcagccgtgtgacccccaagtcatctgtaacagggtcaatcacgtcaacacttgccta
gaggaactgaaacaattgggaacaaagcggcgcacagagcttgaggagtctcgtcagctc
tggactttttttcagcagatggaagagtccgaagcctggatcagggaaaagaatgctatt
ttggcaacacagacatttggaaaggatctgaccagcatcctagagctactcaataagcat
aaaattatggcgggagaacttctgggacggcgatccctcctgcaacacaccatgaaaaaa
ggcaagcaaattttaaataagaaatgttttgggacaggaaagatccaggagaagatcatg
gatgtgaaggcacaatggaagaaattggaagaccatgcaagcttgaggttgcacaggctt
caggaggcccttaatttctttcaattcaatgctgaaactgatgacctcctggcctggttg
caagacacctaccgattagtctccagtgaggattttggccatgatgagtactcaaccaaa
tctctgatgaagaagcacaagagtgtagtgggggagattgagaaacatcgtctcaatgtt
gttgcacttaggaaacacatggttagcctgtcagtgcagtatcgggaactggatgaagtc
cagaacagactgggagaagtcgagcagttgtacactgaggtggtggatgtggcagtactc
agacagcagtggctacatgatgccctagctgtatatcggatgttcagcgaggtccatgca
tgtgaagtttggattgacgagaaagagcaatggctgaacaagatggccatcccagagaga
ctagaagatgtggaggtggtggcacacaggtttgaaagtctggaccaggaaatgaacagc
ctaatgggcagaatcttggatgttaatcagattgtccagcagttgctagacagtggacac
cccagttcttcggaggtccgtggctgccaggatcatcttaatggaaggtggaatcgtatt
gtggaactggtagaacaaaagaaagatcatcttaactctgtcttgcgtatccaaaattac
ttgctggagtgtactgagattaagtctcagatccaagagaaacgtaaagctattgaaacc
atacagtacactggcagtgacctgggaggtgttctagcacttcagcgaaagctgtctacg
atggaaggtgctttgactgttttagaacccaagctgatcttgctccagcaggaggcagaa
gaactggttactgcacatccaaatcaagctcttgaaatcctggtgcagtttgaggacatt
ggagttgaatgggaagagcttaagaggatgttgcaaggctgcgaggattcacttacagtg
gctcgaaggcttcaacaattcattcaagacctggacaacttcttgacctggctggtccaa
acccagactgctgtggcttcagaagtcctaccaagtaacctggaggaagctgaattgctt
atcaatcaacatgccactctgaaggaagaaattggtcggtatgaggaggactataatcgc
atccaggatgtcaataagctgttgacattggaggaaacagaattaccgtacatctccctt
cagcaatggctacaaaagttagatgttggctggaacaaacttttggatgcttgggaaagt
cgtcgagaggttcttgtgcagtcacacatctttcatcttttccttcgcgatgtgaaacaa
gcagaatcttttcttaataaccaggagtcggtgctggcccatgtgaagcatccaactaca
gtggagtctgtagaagcagcaatcaagaaacacaaggacttcaccaccaccatggaatta
aatctgcagaagattaagactgttgttgaggcaggggaaagcctcatcattcagggtaat
atctactctgagagaattagagaaaggattgataccatctccaacaggagtaagcagaat
gcagccatggccgaaacttggcttcaaaagctgaacgttcacttagagttacagaagttt
ctgcagagttgtcaagagctggatgactgggtcacggagaagatgctaatggcacgagat
acctctcgagacgaggcacaaaaactgcacaagaaatggctcaagcatcagactttcatg
gccgaactggcccaaaacaaggagtggctggaaaaaatcgaaaaggaaggtcaacagctg
atccaggagaagccagaactgtcctctgttgtgcagagaaagctaaaagagattcgagaa
tgctggcaggagttggagtccaccacacaagccaaggcacgggaactttttgaggctaat
aaagcagatttgttagtgaaaagctactcagatttagaccaccgcctcacccatctggaa
ggccagctgaaccaagtggaccaggggcaggatctcatcagtgttaataaacagctgaag
aaactacagagtatggagtcccagatggaagactggtataaggaggtgggagagcttcag
gtacaagcatcctccatccctcagcaaggacttattaaggacaatgttaatgataagcag
aatatggtggagacaagaattgtaaggctcatcgagccccttaaagaaagacgacgtatt
cttttagcgtctaaggaggtccaccaggtgacccgtgaccttgaggatgaaattatctgg
attgaggagcggctgccattggcaacatctaaggagcatgggagcagtttgcaagctgtc
cagcagctgatgaagaaaaaccagtctctgcagcgtgagatcataggacatcagtcgagg
atggaagacgtgctggacagagcaggcctcattgcctcaatccgcagtccagaggcagac
tgtgtgcgagctagcttggactgtctacgtcagttgtgggatatgctgcgctcagaaact
gagtgcaggcagagaatgctggatggaatgtaccaagcacagcaatactactttgacgtg
acagaagtggaggcttggctcagtgaacaagaactgcacatgatgaatgaagagatggga
aaggatgaggccagcacccttcagttcttgaagaagcatcttgttattgaacaaacaatt
gaggactacgctgaaactattggcctgctgtcccaacagtgccgctccctgcttgagatg
gggcaccctgaaagtgagcaggtcagcaagcgtcagtcccagattgatcgactctatgtc
tccctcaaagacctggtagaagagcgcaaaggaaagttggaacaacagtattggctctac
cagttgaaccgtgaggtagatgaactagagcattggattgcggagcgtgaagtggtggct
ggatcgccggagcttggccaggactgtgaacacgtcttaatgctccaagaaaagtttaca
aagtttgccacagaaacgggaaccctggggcaggagcgggtatcagctgtgaatcagatg
gtggatgagctgatcgactatggacattcggatgcagcaacaattgcggagtggaaggat
ggtgttaatgaggcctgggcagacttgttggaattaatggagacgcgtgcccaaatgctg
gctgcatcccaccaactacacaagtattttgctgattgccgagaggtgctggttcaaatt
gaagacaaacagaagcgcctgccagaggtgcgcgctcgccaaggagggactgcaaatacc
agcactctgcagaggctcatgcacagctttgaacatgaactccagttgcttgtcacccag
gtgcgccaactccaggagagtgcagcccagttgcgtactgtctatgctggtgaaaaagca
gacgccattgtagcgaaagagcaagaagtaatgcaggcctggaaagagctgctgacatcc
tgtgaagaatgcagacttcaaatcaccacatcaactgacaaactgcgattctttggggta
gtacgggacctggtttcttggatggatggtatcatctgtcagattggcaccggtgaaaag
ccaagagatgtgtcgtcagtggaggtgctgatgaattaccaccagggcttaaagaatgag
attgaggcccgcaataagagcgtaatgcagtgtgtggagatggggaagacgctcttggca
gccaggaacccagcagcagaggagattaaagataaactggagaagcttctggcaaaacag
aaggagctactggagaagtgggacaagcactgggaatggctgaagcacatgctagaggtc
aatcagtttgcccaggaggcagttgtggcagaagcctggcttactgctcaagaacctttt
atccgtagccaagagttgggcaacagtgtggatgaagtggaacagctgattcggcgacat
gaggcctttcggaaagctgctgccacctgggaggagcgtttcagttctttacgacgcctc
accacgctagagaaattaaaagcagagcaaggcaagcaacccccaactccattactgggg
cgcaaagtatttatggatccccaagagcctacatcagcaagggcatcttcttctcttcta
cggcagacaatctatgaacaaactgaacctaaggatgacagattagtagaacctgttttg
tctgcccacaagctgggaagtactgcttcatcttatactccagtgatgaatgggacaaaa
tatggaggtctggaactccgaaatgaaccaaagattgcctatgttcggcaagaattaaag
ccagagcgcctacagcctaagattgacattcttcaagatggtgtgcaatcagccttgaca
gcaaggcaagtggggcaagaagcccctcggaaagatgacaccaaaggtccaactgctgct
gagctccaagtccagcaggttagtagacatcaggatctcactgatggaaaagtcagtcag
tcagagcctcacagtgaacagaagaaaagagaacgagaaaggaggctggaaaggcagaca
tccagtgaacaagaagttcaagctaggcttgatgagcttcctcaggaaagacggcgggaa
aggtatgagcgaaggttagaaagacagacatcaagtgaacaagaagttcaaaagaagact
gaagaacaccctcaggaaaggagaagagaccgacacgagcgccgactggaaaggcaggaa
tcaagtgaacaggagacagccagagaccagtctgagaagaaagctgcaggggagaagagg
tcgacattggcagatattgtggaacagctacaggagagagaagctgcccaattacagtct
cagagtagagagagagaaggacctccacgtctcccgaatgggctacctgagcgaacacct
cgccccgaccggcctcgagcccgggaccgacctaaacctcgtaggcggccaaggccgaag
gacccaaacgcaccaccaggagaggccagacgatctcgttcagcaccagcccagagcagc
tcggctctgcctcccctccctcccacccatacagcccagcatgaggggactctgttccga
aagcatgaagtcgagagccagaagaaggcttcaaacaggtcctgggtgagcctctactgc
acaatttctaatggtgaaatgggattttacaaggacgccaaaaacacagcttccacttat
aatggagagccacttcttagccttcaaaactgtgcttgtgaagttgcaaatgcttacaaa
aagaagaagaatgtcttcaaattaaaaacaaaagaaggtagtgaattccttttccatgca
aaagatgaggaggagcttaagaaatggattgaggcgatatcaatggccatttcagaacat
gaagaaattgcaaaatgggcacagagcctgcctactacctcttcaacagatgaaggcaac
acacagagagcgggagaacgacgcatgagtgtttctgcgaaaaagaaatga
DBGET
integrated database retrieval system
