Polypterus senegalus (gray bichir): 120538740
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Entry
120538740 CDS
T08668
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120538740
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120538740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
hEGF
TB
EGF_3
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_2
EGF_DL_JAG
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
120538740
NCBI-ProteinID:
XP_039624105
LinkDB
All DBs
Position
11:complement(23500324..24116550)
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AA seq
1823 aa
AA seq
DB search
MLSREQRFLPRCACLLVLFGCALSLGLQLKNLTREAKKGRPGLPAAVLSPKNNRSSAKLQ
IGVGRIAVQDKESAGNATGEFGQLTGPNVCSGRCCSGWSVAPKTKKCTKPQCTPRCLNGG
TCKQPQKCVCKPGFEGSRCDRAITTAAPVTTPHAQPTNPIIGSVPNAVQLKNAGTEMTDQ
VKRKTPGSEKKLATVRWQPLTLKEAQSVLQKKSSAASGASSKMVALLSKHVEAERNKLLL
AGLLEAKGTRVKTIRTPRGDYTIHRTPVLAVNQSMAREHVKVLFTPTICKIRCTNGRCAN
HCEKGNMTTLYSTENGHSSPGAGFRVFLCRLLCQNGGICIQQDRCLCPPTFTGRYCQIPT
TASPSSNNEIEAVSQNDMAVISNGRLVHSVHTLPLQSHQQEQNGNASMVNVHVKHPPEAN
VKIHQVLRVHGRQALPSLEQSDSSFPRVSEDNRNALTARERNSVLASRTQERLIINGGGS
ETVGHCFTEVRSGQCSSPLPGAHTQDACCQGSGLAWGISECALCPSFQGNGSRGDAGCPR
GFRRINGTQCVDINECLEPGFCRNGDCVNTRGSYTCICKPGFLLDTAHGRCISHHALSEV
KGQCYRVLKTGFCSLPLLRNITKQVCCCSRVGKAWGRTCDRCPAFGSEAFKEICPAGPGY
HYSVSNIKVNLGTVEHGAGASAHGQGHGQQTTTITQASVTSPIDSHRTRLKEEEEHTFVQ
ASPFPLDIRDVPYTPETSVCDSRPHICGSGTCVPLQGSRYLCECHPGYQQVNQQAPCVDV
DECRETPNPCTNSHCENTAGSYRCVCSTGFRMNPQRTKCIDIDECRLTPSLCSNGRCENS
AGSYKCLCLPGFRADAQGTRCTDIDECRQAPSICSNGRCENTVGSYRCVCPTGFRLDRVG
NKCTDVDECQQTPSICSNGRCENLVGSYRCTCNAGFKPSLQGAKCADVDECQLNPSICAN
GRCENTVGSYRCVCATGFKAEPQDARCIDINECQQTPGICVNGHCENTLGSYRCACRSGF
RLEPDGTKCVDINECQISAPCGSHGRCLNSEGSYRCECKPGYRMDGGGQRCIDINECFEG
DFCFPNGECLNMEGSYSCLCSPGYKLSPNGSLCVDIDECARSDLCQDGRCINTEGSFECS
CKTGFAANPERNTCLDLDECAESRGAVCASQRCENTIGSYHCIASCEPGHRLTASGACID
INECANATICGDHAFCRNVIGTYQCLCDQGYESAPDGKSCTDINECQSMQGVCGTALCEN
MEGSFLCICAKREEEFDPHIQRCVSRELPAVPDLGLSSPSVINWEDPSTPRRANVTDCYY
NINDPMVCSNVLAQNITKQECCCTIEVGWGTNCQISPCPTSGTAEYLALCPHGRGYIPSP
SEPFRYIDVNECALFGSRVCKNGLCINNEPGYSCYCNSGYYYDATVLECVDNNECLEEGA
CLGSHCVNTVGSYYCTCQPPQIFDPIRRVCVSNTSQSVGQDENLSICWVELGENLECRRI
LMERQTTFTECCCLYGEAWSLECALCPDRNSVDYELMCNMPRPPGFDGPFTVEDPNPYSE
AYIRQFERSYPGPYGPGPYDDPSSRGGIPEYVRPGYGDYSSLRGRVEGYRGAAEQYTPAE
RPYERRGSSRRFGTEGYEEDPSYESLTPETGPVLVDPVYEPGGRQSTRTGFSSRSSQSAG
PPVVPIEPQPGEPWLQYRPRERAPYQEYPGQPLRRTRTESFERRYEGYEGLSAEECGILH
GCENGRCIRVPEGYTCDCYDGYQLEMTTMACIDINECDEADDPATLCMNGQCVNTDGSYQ
CVCLRGFIMSLQPNYCIPALPQE
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgctaagtagagagcagcggtttctcccgcggtgcgcctgcctcctcgtgctgttcggc
tgcgctctctctctcgggcttcagcttaagaacttgacccgcgaggcaaagaaggggaga
cccgggctaccggcagctgtgttgtctccgaagaacaatcgttcctctgcaaaactccag
attggcgtgggcaggatcgcggtacaagacaaagaatcggcagggaacgcgaccggcgag
tttggccagctgacaggccctaatgtttgcagtggtagatgttgctcaggatggagtgtg
gctcccaaaacgaaaaagtgcacaaaacctcagtgtaccccacgttgtttaaatggaggc
acctgcaaacaacctcagaagtgtgtctgcaagcctggcttcgaaggctcccggtgtgat
cgagccattaccacagctgctcctgtcacgaccccccatgcacagcccaccaatcccatc
atcggttcagtgccaaatgctgttcagttgaagaacgcagggacagagatgactgaccaa
gtgaaaaggaagacgcctgggagtgaaaagaagttggcgacagtgcgctggcagcctctg
acgttgaaggaagcccagtctgttctgcagaagaaatcctcagcagccagtggtgcatcc
agcaagatggtagccttgctttctaaacacgtcgaggctgagcggaataagcttctgttg
gcaggcctcttggaagccaaagggaccagagtgaaaaccatacgcacgccgaggggagat
tacaccattcataggactcctgtcttggctgtgaaccagagcatggcaagggagcatgtg
aaagtgctcttcacccctaccatctgcaagatccgctgtaccaacgggagatgcgccaac
cactgcgagaaggggaacatgaccaccctctacagcactgagaatggacactcgtcaccg
ggagcgggctttcgagtgtttttgtgccgacttctctgccagaatggaggaatatgcatc
cagcaggaccgctgcctctgtccgcctactttcactgggaggtactgccaaatcccaacc
acggcctccccctcctccaacaacgagatcgaggcagtttcccaaaacgacatggctgtc
atcagtaacgggcgacttgtgcattcagtgcacactcttcccctgcagagccaccagcag
gagcaaaatggaaatgcttctatggtgaatgttcatgtcaaacatcctcctgaggctaat
gtgaaaatccaccaagtgttgagggtccatggtagacaagcactccccagtctggaacag
agtgattcaagttttccaagggtctccgaggacaacaggaatgctctaacagcaagggag
aggaactccgttttagcctccaggacacaagagaggctaatcattaatggcggaggttcg
gagacggttggccattgctttacagaagtcaggagtggccagtgtagttctcctctgcct
ggagctcacacacaggatgcatgctgccagggctcagggttggcctggggaatttctgaa
tgtgccctttgtccatcatttcaaggtaatggctccaggggagatgctggctgtccaaga
ggcttcaggagaatcaatggcacacaatgtgtggatattaatgagtgtttggaacctggg
ttctgtcggaatggagattgcgtgaacaccagaggaagttacacatgcatttgtaagccc
ggattcttattggacaccgcgcatggacgttgtatttctcatcatgcactgtccgaagtc
aaagggcagtgctaccgtgtgctgaagactggtttctgctccttgcccctcttgagaaac
atcactaagcaggtgtgctgttgtagccgggtgggaaaagcatggggcagaacttgtgat
cggtgccctgcctttggatcagaggcttttaaagagatctgtcctgctggacctggctac
cattactccgtatcaaacatcaaagtcaaccttggaactgtggaacatggagcaggggcc
agcgctcacggccaaggacacggacagcagaccacaactataacccaagcatctgtaacc
tcacctattgactctcatcgaactaggctgaaggaagaagaagaacatacctttgtgcaa
gcctcccctttcccactggatatccgagatgttccctacactccagagactagcgtatgt
gactcaaggccacatatctgtggatctggaacatgtgtgcctcttcagggtagcagatat
ctgtgtgagtgccaccctggctaccaacaggtcaaccagcaagctccatgtgtagatgta
gatgagtgccgagagacccccaatccttgtacaaatagccactgtgagaatacagctggc
agctacagatgtgtatgttctacaggcttccggatgaatcctcagagaaccaaatgcata
gacatcgatgagtgtcgcctaacccccagcctttgctcaaatggacgctgtgaaaactca
gctggcagctacaaatgtctgtgccttcctggtttcagagcagatgctcaaggcaccaga
tgtacagatatcgatgagtgtcgtcaggcccccagtatctgctcaaatggccgctgtgag
aacacagtgggcagttatagatgtgtgtgccccactggttttagattggaccgcgttgga
aacaagtgcacagatgtggatgagtgtcaacaaacgcctagcatttgctcaaacggacgt
tgtgagaacttggtgggaagctacaggtgcacatgcaacgcaggtttcaagccaagcctt
caaggagctaagtgtgcagatgtggatgaatgccagctgaaccccagcatctgtgccaat
ggacgctgtgaaaacacagtgggcagctatagatgtgtctgtgccaccggttttaaggct
gagcctcaagacgctaggtgcatagatataaatgaatgccagcagactcctggcatctgt
gtaaatggtcattgtgaaaacacactgggcagctacagatgtgcctgcagaagtggattc
agactggagcccgatgggaccaagtgtgtagatattaatgaatgccagatctctgcaccc
tgtggaagccatggccgctgcttaaattcagaaggctcttatagatgtgagtgcaagcca
ggatacaggatggatggaggaggacaacgctgcatagatatcaacgaatgttttgaagga
gatttttgttttccaaatggagagtgcttaaacatggagggctcatatagctgcctgtgc
tctcctggctacaaactgagtccaaatggaagcttgtgcgttgatatagatgagtgtgct
cgatctgatctctgccaggacggccgttgcatcaacacagaaggttcctttgagtgctcc
tgcaagactggatttgccgccaatcccgagaggaatacttgccttgatttggatgaatgt
gcagagtccaggggagcggtgtgtgcctcccaacgctgtgaaaatacaattggatcatat
cactgcattgccagttgtgagccaggccaccgtctgacagccagtggtgcctgcatagat
atcaatgagtgtgccaatgctacaatctgtggtgaccatgctttctgccgcaacgtgatc
ggcacctatcagtgtttatgtgatcaaggctatgaatcggcccctgatggcaaaagctgc
acagacattaatgagtgtcaaagcatgcagggtgtctgcggtacggctctgtgtgaaaac
atggagggctctttcctgtgtatttgcgccaaaagggaggaggagtttgacccccacatt
cagcggtgcgtcagcagggaattaccagcagtgccagatttaggattaagcagtcccagc
gttataaactgggaggatccttccacaccgagaagagccaatgtcaccgactgctactat
aacatcaacgacccgatggtgtgcagcaacgtgctggcacagaacatcaccaagcaggag
tgctgctgcacgatcgaagtaggctggggaacgaactgtcagatctccccctgccccacc
tctgggacagctgaatacctggcgctttgtccacatggaagaggttatataccgtcacct
tcagaacccttcagatacatagatgtcaatgagtgtgcactctttggatcaagggtgtgc
aaaaacggcttgtgcatcaacaatgagcccggctactcgtgctactgcaacagcggttat
tactatgatgccaccgtgctggagtgtgttgataacaatgaatgcttggaggaaggagct
tgtcttggcagccactgcgtcaacactgtggggtcttattactgcacatgccagccaccg
cagatttttgacccaatacgtagagtgtgcgtcagcaacaccagccagtctgttggacag
gacgaaaatctgagcatctgctgggtggagctgggagaaaacctcgagtgcagacgcatc
ctgatggagaggcaaaccaccttcacggagtgctgctgtctgtatggagaggcatggagc
ttagaatgcgcgctgtgtcctgacagaaattcagttgattatgaattaatgtgcaacatg
ccaagaccgcctggctttgatggtccattcacagttgaggatcccaatccttacagtgag
gcatacataagacaatttgaaagaagctatcctggcccttacggaccaggcccttacgat
gacccatcgagcagaggaggcattcctgagtatgtgcgacctggatatggagactactcg
tctttacgaggccgtgtggaaggatacagaggtgcagcagaacagtacacaccggcggaa
aggccctatgagaggcggggctcatcccggagatttggtactgaaggatatgaagaagac
ccatcgtacgagtccctgacacctgaaactggccctgtattagtcgatccagtttacgaa
ccaggaggcagacagtcaaccagaacaggattcagctcaaggagctctcagtctgctggc
ccaccagtagttccaattgaacctcaacctggagagccttggttgcaatacaggccacgg
gaaagagcaccatatcaggaataccctggtcagcctttgagaaggacccggacagagtcc
tttgagagaaggtacgagggatacgaaggcctaagtgcggaggagtgtgggattttgcac
gggtgtgaaaacggtcgatgtattcgtgtcccagagggttacacatgtgattgctatgat
ggctaccagctggagatgacaaccatggcttgcattgatattaatgaatgtgatgaagca
gacgaccctgccacgctgtgcatgaacggacagtgcgtgaacaccgatggctcctaccaa
tgtgtgtgcctgcgtggtttcatcatgtccctgcagccaaactattgcattccggcactg
ccccaagagtga
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