Polypterus senegalus (gray bichir): 120539045 Help Entry 120539045         CDS       T08668                                  Symbol cdh23 Name (RefSeq) cadherin-23 isoform X1   KO K06813   cadherin 23 Organism psex  Polypterus senegalus (gray bichir) Brite KEGG Orthology (KO) [BR:psex00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:psex03037]     120539045 (cdh23)    04515 Cell adhesion molecules [BR:psex04515]     120539045 (cdh23) Cilium and associated proteins [BR:psex03037]  Primary cilia and associated proteins   USH complex and associated proteins    120539045 (cdh23) Cell adhesion molecules [BR:psex04515]  Cadherins   Major cadherins    120539045 (cdh23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Fibulin_C PCDH15_12th DUF6296 Motif Other DBs NCBI-GeneID:  120539045 NCBI-ProteinID:  XP_039624680 LinkDB All DBs Position 1:214537289..215901206 Genome browser AA seq 3323 aa AA seqDB search MELCQTWTVRQLVLSLLILHCINPGLSQGNRLPYFLNFFFDNYFLIYEDTPVGASVTQLL ARDPDSDPLVFGVVGEEATRFFAVESNTGIVWLRQPLDRETKSEFQVEFSVSDNQAVIKG TVNIQVGDVNDNSPTFHNQPYSVRIPENTPVGTPIFIVNATDQDQGTGGSVLFYLQPPSP FFAIDGARGTVTVTRSLDFETTQAYQLTVNATDQDKNRPLSSLANLAITITDVQDMDPVF LNLPYSTNIYENSPPGSTIRMITAIDQDRGRPRGIGYTIVSGNTNSIFALDYISGALTLN GQLDRENPLYSAGFILTVKGTELNDDRTPSNASVMTSFNILVIDVNDNAPEFNSSEYRVR ITELAQVGFALPLFIMAQDKDEGANSMFQIFLEGNNSNHFFISPTSVQGKADIRIRVAIP LDYERISSYQFSLLANETTSEHAGFARIQIDLINENDNRPVFSKSLYNVSLYENATVGTS ILRVIATDNDFGSFGTVMYFFSDEPEKFTLDKDTGDVILTGRLDFELTQRYTITVIAQDG GGEETTGRLRINVLDVNDNAPMFQKEGYSGTVRENEPSTIQVARVRATDEDSPPNNQITY SIASATAFQSFFEISLVEGYGVISVTRPLDYELIPSRTIRLTVVAKDGGSPFLNSSVPVI IDIIDENDNPPTFSQSSYIISVPENIIAGATVLFVNATDLDASQEYGQASLIYSLEGSTQ FRINTRSGEITTTSLLDREQKSEYILIIRAVDGGAGPAQKTGIATVNITLLDINDNNPAW VGEPYQVNVVEMSPGGTDVVTVLAVDPDRGDNGTVTYSISPPNKFYTINNQTGKIRTTGV VLDRETTRPGELDLMKTIVVSASDRGSPPLRATVSTTILVNLLDLNDNDPTFMNLPFTAD ILEGVPSGSSIFQVSVMDPDEADNGLVKLQMQVGMPRMDFIINGSTGLVTSTITLDREKT QEYYLRVVAMDSGQFPRISTSTLTIRVLDINDETPTFFPIIYNVSLLENIPRDYTVVRLN CSDADAGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVNLDREAQASYSLIVEAIDNGPA GSRRTGTATVNIIVKDVNDNRPIFLQNVYEASVMENIPESTSIVQVQATDADEGENGRVL YRILSGNNNNVFRIDGVTGLITRGQRPLDRETTTSHMLEVEAYNSDLGSMRSTVRVIVYV EDANDESPIFTQQQYNRLGLRETAGIGTSVVVVRATDRDTGDGGAVVYHIEGGAEGKFEI DVSTGLVTTVDYLDYETKTSYLMNISATDQATPFYRSFCSVYVTLLNELDEAVTFSSPAY EASIVENIATGTEVVQVRARSADNLNQITYRFDPDTSPLALALFKIDSVTGRITVTGLVD REKGDIYTLTVVADDGGPKKDSTVKISITVLDENDNSPEYDITSDSSVDVREDVPIGRRV AVVLARDKDIGRNALVNFSLVAGNVQEAFAIRTTNNTYGEVFVVKTLDRETIDRYLMTVR ASDNGFPQRRTDQSLTINVLDVNDNPPVIQNPRGYNISINENVGGGTAVLRVQASDRDTG SNSMLSYYITQGNEDLTFRMDRVTGEIVTRPSPPDRERQQFYELAVTVEDDGTPPLSATT TVFVTIVDENDNAPVFGQSMYEVTFSEGPNTTGIMMVAVSAIDRDQGPNGTVVYSIKEGN VGGTFGVNRTTGAVVTLKALDFEISSGRYTLIITATDQCPIVLQRLTSSATVIINVLDVN DVTPTFPRLFEGTFDITEGQPGPRVWTVKAVDNDSGLNGQVEYSIVAGDPQNEFVVSPVE GELRVRRDIELDRENIATYNITVMAKDLGQPALSSTVLIGVRVLDINDNDPVIQNLPLEK SVSEGAFVSTEICRVLASDTDSGRNALLTYNVTGGNTDNAFYINETTGVVLVNRPLDRER VPQYRLTITVKDNPENPRIARRDSDVLVISILDENDNRPIFTQSSYQAEIPENSLSGTSV AVLNGPILAVDNDVGPNAVVTYRLLGSRVDLFTVDNQTGVVSVRSRAILDREALSNPRLE MILVAEDVGLLNSSVPLTIVVLDENDNRPIFSPAVLTVSLRENSPAGVVVTQLTASDADS SVNGWLNYRIQGGAQDRFLIDAQSGAVLVGNTTLDREERDSYRLVVVAVDRGNPPLSGTA TLIIMLDDVNDSRPEFLQPIQAVSVNESTPPGAIIAQVTATDRDLRPRLEYYIIEVLAMD DTNTLVPNLQDSFGIDFHTGAVFVKKPLNRELVATFVITISVHDNASDVIDQSVSVPNAK LTVNVLDVNDNAPRFRPFGVTNFTERILEGAQPGTTLISVSAVDPDKGPNGQVTYELQNL PRGGYVRLEDANAGKIIANRTVDFEQVQWLNFTVRAQDHGAPPRFAELPVFLQIIDVNDN NPVFSQPSYQKSVFEDVPLGTVILRVSATDADSERFSLIEYSLVNGEGRFGITPTTGDIY ILSPLDREKKDHYTLTAVAKDNPEDSASNRRENSVQVLVTVYDVNDIRPQFPKQLYSTSV FENEPAGTSIITMSATDLDEGDNGLLVYTLRGPGVEAFSMDADSGLIRSQRLLQSFERFN LTVVATDKGRPPLWGSTALQIEVIDVNDNRPVFERPANGTIVHILEEQPPGLVVFEVYAT DRDEGLNGKVTYSFLQTTAGNKDWDNFKIDMESGVIRTEVRLDREKQSIYTLIIVAKDLG QPVAYETTQVLQVALTDIDDNEPVFLKPPRDSVPYQKLSVLEHSKPGTVVGNVTGAVDAD EGANAMVYYFIAAADQRNSFQMDRNGVLSVTKDLDREITPFQTIIVKASSNRNWSVPQSQ RSSRKRALDPSTDPTLQEVRIYLDDINDQSPQFLKSEYTAGVAADAKVGSDLIRVTAVDA DIGNNSIVFYSIRSIQFKLQNDSKNVTNVFTIGQTDGILRTNDLFMAYGPGYFVVDIVAT DQANHSDTVSVGIYILRDDQRVKIVINENPERVRQFEEEFINLLSNITGAIVNTDDLQFH VDKKGNVNYAQTDVLIHVVNKQSNRILDVERVIQMIDENKEQLHNLFRKYNVLDVQPAVT GRVPDDFTTLQMAIIILAVLLFLATMLFVFMNWYYRTMHKRKLKAVVAGSTGKQGFMDIL DMPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPENLSDITDLWNSPARTHGTFGR EPQASKPEEDRYLRAAIQEYDNIAKLGKIMREGPIKLIQSDMDDDEEERPQRGTLRLKHK EPIEYKGPDGIHMVHGSTGTLLTSDINSLPEDDQKTLVRSLEALHSDSGPYTDRNARTES AKSTPLHRTKEIIMESPLEITEL NT seq 9972 nt NT seq  +upstreamnt  +downstreamnt atggagttgtgtcagacttggacagtcagacagcttgtcttgtcacttctgatattgcac tgcatcaatccaggtctgtctcagggcaaccgtctgccatactttttgaatttcttcttt gacaactacttcctgatctacgaagacactcctgtgggtgcttctgtaacacagctgttg gcacgggaccctgacagtgatccactcgtgtttggagtagtaggtgaggaggccactcgc ttctttgcagtggaaagtaacactggaattgtctggctccgacagcctctggacagagag acaaaatctgaatttcaagttgaattttctgtcagcgacaatcaagcggtcatcaagggc acagtaaatatccaagtaggagatgtgaatgacaattctccaacatttcataatcagcct tacagtgtccgcattcctgagaacacaccggtggggacacccatctttatcgtgaacgcc acagatcaggatcaaggtacaggtggaagtgtgctgttttaccttcagcccccttctcct ttctttgccattgatggagctaggggtaccgtcacagtgacccgatcactcgactttgag accactcaagcctaccagcttacagtcaatgccacggatcaggataagaatcggcctctt tcaagtttagccaacctggctatcaccatcacagatgtgcaagatatggacccagtgttc ctcaacctgccctacagcaccaatatctatgagaattctcctccaggcagtactatccga atgatcacagcaatagaccaagacagaggtcgaccccgaggcattggttacactattgtg tctggaaataccaatagtatttttgctctggattatatcagtggagcacttacactaaat ggacagttggatcgagaaaaccctctctactctgctggattcatcttaactgtcaagggc accgaactcaatgatgatcggactccatccaatgcctcagtaatgacctctttcaacatc ttggtcattgacgtgaatgacaacgcacctgagttcaacagctcagagtatcgtgtgcgc attactgaactggcccaggtgggctttgctttgccactgttcatcatggcacaggacaag gatgagggtgccaacagcatgttccagatattcctagaaggcaacaattccaaccacttc ttcatttcacctacgtctgttcagggtaaagcagacattcgtatccgagtggccatccca ctggattatgagcgcatttccagttatcagttttctctcctggcaaatgagacaacatct gaacatgctggatttgcaagaattcagattgacctaatcaatgaaaatgataacaggccg gtgttttctaaatccctctataatgttagtctatacgagaatgccaccgtgggaacatcc atcctgagagtcatcgctacagacaatgattttggctcctttgggacggtcatgtacttt ttcagtgatgaacccgaaaaattcaccctggataaagatactggggatgtcatactcact ggaagactggactttgaattgactcagcggtacaccatcactgtgatagctcaagatggt ggaggagaggagacaacaggtcgtcttcgcatcaacgttctggatgtcaatgacaatgct cccatgtttcagaaagagggatattcgggtacggtacgggagaatgagccatccaccatc caggtggcacgtgtacgggccaccgatgaagactctccacccaacaaccaaattacctac tcaatcgcctcagccacagcgttccagagtttctttgaaatttctcttgttgaaggttat ggagtgataagtgtgactcgtccactggattatgaactcattccaagccgaacaatacgc cttactgttgttgccaaggatggtggcagtcctttcctgaacagcagcgtccccgtcatc attgatatcattgatgaaaacgataaccctcccacattcagccaatcatcatacatcatc tctgttcctgaaaacataattgcaggtgccacagttttatttgtgaatgccacagatctg gatgcatcacaagaatatggacaagcctctctgatttattccttggagggctctacccag ttcagaatcaacactcgatcaggtgagatcacaactacttcacttctcgatagagagcag aaatctgaatacatcctcattattcgggctgtggatggaggtgctgggccagctcagaaa actggcatagctacggtcaatattaccctgctggacatcaatgacaacaatccagcatgg gtgggagagccatatcaggtgaatgtggtggagatgtcccctggtggcacagatgtcgtc acagttctagcagtggatcctgataggggagataatggaactgtcacctacagtattagc ccccccaacaagttctacacaattaacaatcagactgggaagatccgaacgacaggagtg gtgctcgatcgtgagaccactagaccaggagagctggacctcatgaagacgattgtggtt tctgcaagtgaccgtggatctccgccattgcgtgcaactgttagtactacaatattggtg aatctactggacttgaatgacaatgatcctacctttatgaaccttccattcactgcagac attcttgaaggagttccaagtggctcttccatttttcaggtatcagtcatggacccagat gaggccgataatggtcttgtcaagctacaaatgcaggtgggcatgcctcggatggacttt ataattaatggctccacagggttggtaacctctacaattactcttgatcgggagaaaaca caagaatattacttacgtgtagtggccatggactcaggacagtttcctcgtatttcaaca agcacgttgaccatcagagtgctggacataaatgatgagactcccaccttctttcccatc atctacaatgtgagccttttggagaatataccccgtgactacactgtcgtgcgtctcaac tgcagtgatgctgatgctggcctcaatgctgagcttagctacttcataacaggaggaaat caagatggcaaattcagcgttggttttcgggatggagttgtacggactgtggtaaatttg gatagagaggcacaggcttcctattccctcattgtggaagccatagacaatggccctgca gggagccgccgcacaggtactgccactgttaacatcatagtgaaggatgtcaatgacaac cggcccattttcttgcagaatgtctatgaggcaagtgtaatggagaacattccggagtca accagcattgttcaggttcaagcaacagatgcggacgaaggagaaaacgggagggtgctc tacaggattctgtctggtaataacaacaacgtgtttcgtattgatggagtgacaggactt attactcgaggacagcgccccttggaccgtgaaaccaccacttcacacatgctggaggtg gaagcctataacagcgaccttggaagcatgcgtagcacagtacgggttattgtgtatgta gaagatgccaatgatgagtctcctatattcactcaacagcagtacaatcgtctgggcttg agggagactgcaggcattgggacatcggtggtggtcgtacgagctactgacagagataca ggggatggtggtgcagtagtttaccatatagaaggaggtgcagaaggtaaatttgaaatt gatgtgagcacaggcttggtgaccacagtagactatctggattatgagaccaagaccagc taccttatgaacatctccgcaacagaccaggcaacacctttctatcgtagcttctgctct gtctatgtgacattgctgaatgaacttgatgaggcagtcactttctcaagtccagcatat gaggcctccatcgtggaaaatattgcaacaggaacagaagtggttcaggtccgggcacgc tcagcagacaacttaaaccagatcacctatcgctttgatccagacacctccccacttgcc ctggctctcttcaagattgacagtgttactggacgaatcacagtgactggtttggttgat cgggagaagggagacatttacacattaacagtggttgcagatgatggtggacctaaaaaa gattcgactgtgaagatttccatcactgtcttggatgagaatgacaacagtcctgaatat gacatcacttctgattcttcagtcgatgttcgggaagatgtacccattggaaggcgtgta gctgtggtcctggcccgcgacaaggatattgggagaaatgccttggttaatttcagtctg gtggctggaaatgttcaagaagcatttgcgattcgcaccacaaataacacctatggggaa gtatttgttgtcaagacactggacagagagactattgatcgttatctaatgacagtccga gcctcagacaatggttttcctcagcgtaggactgaccagagtttgactattaatgttcta gatgtgaatgacaaccctccagtcatccagaatccaagaggttacaacatcagcattaat gagaatgtgggaggtggcaccgctgtgctgagagttcaagcctcagatcgagacacaggc tccaacagcatgttgtcttattacataactcaaggcaatgaagacctgacttttcgcatg gaccgtgtcactggggaaattgtaacgcggccttcaccaccagaccgtgagaggcaacag ttctacgagctagcagtgacggtggaagatgatggaaccccaccactatcggccaccaca actgtctttgttacaattgtggatgagaatgacaatgccccagtctttggacaatccatg tacgaggtgacattcagcgagggacccaataccactggcatcatgatggtggctgtcagt gctattgacagggaccaggggcccaacggcacagtcgtctacagcattaaggagggaaat gtgggaggcacatttggtgtgaacagaaccacgggtgctgttgtaactctgaaagccctg gactttgagattagcagtggccgatatactctcatcatcacagccactgaccagtgtccc atcgtgctgcagaggctcacatctagtgccacagtaatcatcaatgtcttggatgtgaat gatgtgaccccaactttccctcgtttgttcgagggcacatttgatatcacagaaggacaa cctggtcccagggtgtggactgtaaaagcagtggataatgactcaggtctgaacggacag gttgagtacagcattgtggcaggagacccccaaaatgagtttgtggtgtcaccagtggag ggagagctgcgtgtgagacgggatatagaactggaccgagagaacattgccacttataat attacagtaatggccaaggaccttgggcagccagcacttagcagtacggtactcattgga gttcgtgttttggatatcaatgacaatgatccagtcatacagaatttgcctttggagaag agtgtaagcgagggagcctttgtttccacagaaatatgtcgggtgctggcaagtgacaca gacagtggcaggaatgccttgcttacctataacgtaactggaggaaacacagacaatgcc ttctacatcaatgagacgactggagttgtgctggtgaacagaccactggaccgggaaagg gtgccccagtatcgattaaccataactgtgaaggacaatccagaaaatccacgtattgca cgaagggattcagatgttttggtaatcagcattttagacgaaaatgacaaccgtcccatc ttcactcaatctagctatcaggcagaaattccagagaattccctctcaggtacatcagtg gcagtcctgaatgggccaatcctggctgtagacaatgatgtgggtcccaatgcagtggtc acctacaggcttttggggtctagagtggatctctttacagtggataaccagacgggtgtg gtttcagtacgttcaagagcaatcctggaccgtgaggcactgtctaacccacgacttgag atgattctggttgcagaagatgtagggcttctgaacagtagcgtcccgctgactatagtg gttctagatgagaatgacaacaggccaatattcagtccagctgtgctgaccgtctccctg agggaaaacagtccggcaggtgtggtggtcacacaattaacagcaagcgatgctgactcc agtgttaatggctggctaaattatcgcattcagggcggagctcaggaccgctttctgatc gatgctcaatcaggagcggtgttggtgggaaacactaccctggatcgtgaggagcgagat tcctatcgtctggttgtggtggcagtagaccgtggcaaccccccactctcaggaactgcc actttgattataatgcttgatgatgtcaatgattcaaggccagagttcctacaacccatt caagctgtcagtgtgaatgagtccactcctccaggggcaatcattgctcaagtaactgcc acagatcgggacctgaggccgcgtctggagtattatattattgaagtccttgctatggat gataccaatactcttgtgcccaatctccaagattcctttggtattgacttccatacaggt gctgtgtttgtaaagaaacctctgaatcgagagctggtggccacctttgtgattaccatt tctgtccatgacaatgccagtgatgtgattgatcagtctgttagtgtaccaaatgcaaaa ttgacggtgaatgtgcttgacgttaatgataatgcacctcgattccggccatttggggta acaaatttcacagaaaggatcttagaaggggcacagcctggtaccacccttatctcagtc tcagcagtagatcctgacaaaggcccaaatggacaggtcacctacgagctgcagaatctc cctcgagggggatacgtgagacttgaagacgccaatgcaggaaagattatcgcaaaccgc actgtggattttgaacaggttcaatggctaaacttcactgtgcgagcgcaggaccatggt gcaccccctcgatttgcagagctgcctgtcttcttgcagatcatagatgtcaatgacaat aatcctgttttcagccaaccatcctatcagaaatctgtgtttgaagatgtgccacttggt acagtaattttgcgagtgagtgccacagatgcagattctgaacggttctcccttattgaa tacagtttggtaaatggagaaggtcgctttggtattacccctacaacgggtgacatttac attctttctcctctggaccgagagaaaaaagaccactacacgctgacagctgttgctaaa gacaatccagaggatagtgccagcaaccgtcgagagaactctgtgcaggtgctggtgaca gtgtatgatgtgaatgatatccgaccccagtttccaaagcaactctacagcacaagtgtc tttgagaatgagcctgctgggacctccattatcaccatgtcagctacagatctagatgag ggagacaatggacttttggtgtacaccctacgagggcctggagtcgaggccttctcaatg gatgcagactcgggactcatccgttcccagcgtctcctgcagtcctttgagcgtttcaac ctcacagtggtggcaacagacaaaggaagacccccactgtggggctcaactgcactgcag attgaggtgattgatgtcaatgacaacaggcctgtatttgaaagacctgccaatggaacc attgtgcacatcttggaggaacagcctcctggtctggttgtgtttgaagtttatgctaca gaccgtgatgagggcctcaatggaaaagttacatattcgtttctgcaaactacagctgga aataaggactgggataacttcaaaattgacatggagagtggggtcatcaggacagaagtc agactggacagggaaaagcagagcatatacactttaatcattgtggccaaagacttaggt cagccagtcgcttatgagaccactcaggttcttcaggtggcactgacagacattgatgac aatgaaccagtattccttaaacccccgcgggacagcgtgccctaccaaaagctgtcagtt ctagagcattcaaaacctgggacagtggttggaaatgtaactggtgctgtggatgccgat gagggtgccaatgctatggtttactattttattgcagcagcagaccagcgcaacagtttc cagatggaccgcaacggggtcctaagtgtgaccaaagacttagacagagaaatcacacct ttccaaactatcattgtcaaggcctcaagtaatcgaaactggagtgttccccaaagccag aggtcatctcgaaagcgtgctcttgatcctagcactgatcccactctgcaagaagtgcgt atatatctggatgatattaatgaccagagtccacagtttctcaagtcagagtatactgca ggtgtggctgctgatgccaaggttggttcagatctgatccgtgtgactgcagtcgatgct gatattggcaacaacagcattgttttctatagcattcgctccattcaattcaagctgcaa aatgactcgaagaatgttacaaatgtcttcaccattggtcaaacagatggcattcttcgc accaatgacttgtttatggcctatggccctgggtattttgtggtagatattgtggctact gatcaggcaaaccacagtgacactgtcagtgttggtatctacattctgcgtgatgaccag cgtgtaaagatagtgatcaatgagaacccagaacgtgttcgccagtttgaagaagagttc atcaatctgttgtccaacattacgggagccattgtaaacacggatgacttgcagtttcat gtggataagaaaggcaatgtgaactatgcacagaccgatgttcttatccatgtcgtcaac aagcaaagcaaccgcatcttggatgttgaacgggtgattcagatgatcgatgaaaataag gaacaactgcacaatctctttcggaagtacaatgtgctcgatgtgcagccagctgtgaca gggagagtgcctgatgattttacaacactacagatggccatcatcatccttgcagtcctg ctgttcctggctaccatgttgtttgtcttcatgaactggtactatcgcacaatgcataag agaaaactgaaagcagtagttgctggctcaactggaaaacaaggcttcatggacatactg gacatgccaaataccaacaagtactcctttgaaggggcaaaccctgtgtggcttgacccc ttctgtcgaaatctggaactggctgctcaagccgagcatgaagatgacctcccggaaaac ctgagtgacattactgacctgtggaacagccctgcccgcacacacggtacatttggccgt gagccacaggcctcaaagccagaagaggacagatatcttcgggcagcgatccaggagtat gacaatattgccaagctggggaagattatgagagaaggtcctataaagctcatccagagt gacatggacgacgacgaggaggaacggccacagaggggtactttacgtttaaagcacaaa gaaccaattgagtataaagggcctgatggaatccacatggtccatggaagtactggaact cttctgacttccgacattaacagcctcccagaggacgatcaaaaaaccctagtaaggtca ctagaagcccttcatagtgacagtggaccttacactgaccgcaatgcccggacagagtct gctaagtctaccccactgcacagaaccaaggaaatcattatggagagtcccctggaaatc acggagttatga

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