KEGG   Polypterus senegalus (gray bichir): 120539249
Entry
120539249         CDS       T08668                                 
Symbol
sf3b2
Name
(RefSeq) splicing factor 3B subunit 2 isoform X1
  KO
K12829  splicing factor 3B subunit 2
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120539249 (sf3b2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psex03041]
    120539249 (sf3b2)
Spliceosome [BR:psex03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120539249 (sf3b2)
 Complex B
    120539249 (sf3b2)
 Complex C
   U2 SnRNP specific factors
    120539249 (sf3b2)
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 120539249
NCBI-ProteinID: XP_039625078
LinkDB
Position
11:80282993..80334536
AA seq 932 aa
MALNMATDGPPGAEQTPSDLGGPVAMLSTWTLQELQTKLAEIGAPNMGPREELIERLKSY
SMQTGIIPSKPVIRSDDVDKGGPLPGQIPGMPIPPPPHPLGLPPGMPQGMGLTFPMGLPG
TPPPPPPPPPPPPPGMVPPLHMPVIDPSSLSEEDRLKIAQHRAAMLLQQEERVKQQQQQQ
QQIQQNNDRVLDEHLKEQELLEQQKRAAVLLEHERQQQELAKMQHGVSIPGPRAPEPSPR
PPMPSMPPLPQLPLRGSAPSGPPPPGVTLVPPGISMTTPSPRSRGPPPPPGEDIREGDDG
GAGPKIPQALEKILQLKEMRQEQLGNTAEDEEMPDVDMRSSVAASLSETEDDEIITSKKD
KNRKRRNRKKKKKEQKTTKRIGTSSENQKEKKDKEQEKGKEADPEVQIEYVIEEPEIYDP
NFIFFKRIFEAFKLTDDVKKEKEKEPEKMDKLETTIVKKKGFEEERRDSDDSDEDQRPDI
PKLSKKKLRRMNRLTVAELKQLVARPDVVEMHDVTAQEPKLLVHLKATRNTVPVPRHWCF
KRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEKEEAKTMKTKMREKVRPKMGKIDI
DYQKLHDAFFKWQIKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRIALGMPVGPNSH
KVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPDGCAFGYHAGGWGKPPVDETGKPLYGDV
FGTNAGDFQAKTEEEEIDRTPWGELEPSDEESSEEEEEESDEEKPDETGFITPADSGLIT
PGGFSSVPAGMETPELIELRKKKIEEAMDGNETPQLFTVLPEKRPATMGAAMMASTHIYD
VSAAMAMSGRKGGGGQEPQGVEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDM
VAEHAAKQKQKKRKAQPQDIRGGAKKYKEFKF
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggcattaaacatggcgaccgacgggccacctggagctgaacaaaccccgagtgattta
gggggacctgtggctatgttaagtacatggactcttcaggagctgcagactaaattggcc
gaaatcggcgcccctaatatgggtccaagggaggagcttatagaacgactaaaaagttac
agtatgcagactggaattataccaagcaagccagtgatccgcagtgatgatgtggataaa
ggaggaccgttacccggacagatacctggtatgcccattcctcctcctccacatccatta
ggattacctccaggaatgcctcaaggtatgggtttgacttttccaatgggcttgcctggg
acacctcctccacctccaccacctccaccgccacctccacctggcatggttcctcctttg
cacatgcctgtcatagatcccagcagcttatcagaagaagatcggttgaagatcgcacag
caccgtgctgcaatgcttttgcagcaggaggaacgagtcaagcaacagcagcaacaacag
cagcaaatacaacaaaataatgatcgtgttttagatgaacacttgaaagaacaggagctg
cttgaacaacaaaaacgggctgcagttttgctagaacatgagcggcaacagcaggagctg
gctaaaatgcaacatggagtttcaattccaggaccccgtgcgccagagccaagtccaaga
cctccaatgccatcaatgcctccacttcctcaacttcctttgcgtggcagtgcccctagt
ggacctccacctccaggtgttacacttgttccaccaggaatttcaatgacaaccccaagt
cccagatcaagaggtccacctccaccacctggagaggatatacgagagggtgatgatgga
ggtgcaggtccaaaaatcccacaggcattagaaaagatcttgcagctgaaagagatgaga
caggagcaacttggtaacacagcagaagatgaagaaatgcctgatgtagacatgcggtca
tctgtggcagccagtttatcagaaacggaagatgatgagataataacttcaaaaaaagat
aaaaatcgaaagcgacgtaaccgtaaaaagaaaaagaaggaacaaaagacaaccaagcgt
ataggtacttcaagtgaaaatcaaaaagagaaaaaggataaagaacaggaaaaaggaaag
gaggcagatccagaggtccagattgaatatgttatagaagagccagagatctatgatcct
aacttcattttttttaagaggatctttgaggcctttaagctcactgatgatgtgaagaaa
gagaaggagaaagagccagaaaaaatggataaacttgaaacaaccatagtgaaaaagaaa
ggttttgaggaggaaaggagagacagtgatgacagtgatgaggatcaaaggcccgacata
cctaaattgtccaaaaagaaacttcgacgaatgaacagattgacagtggctgagttaaag
cagttagtggccagacctgatgtagtggagatgcatgatgttacagcccaggagcctaag
cttttggttcatttgaaggccaccagaaatactgtgcctgtgccacgacactggtgtttt
aagagaaaataccttcaaggtaaaagaggtattgaaaagcccccatttgagctgccagat
ttcatcaaaaggacaggcattcaagaaatgagagaagcacttcaggaaaaggaggaagca
aaaaccatgaagaccaaaatgagggaaaaagttcgtcctaagatgggaaaaattgacatt
gattaccagaaattgcatgatgcctttttcaagtggcaaataaaacccaaactaaccatt
catggagacctttattatgagggtaaagagtttgagaccagattgaaggaaaagaaacct
ggagatctttcagatgagctgaggattgcccttgggatgcctgttggtccaaattctcac
aaggttcctcctccttggctcattgccatgcagcggtatggacccccaccttcctaccct
aacctgaagatccctggactcaactctcctattcctgatggctgtgcctttggataccat
gctggaggctggggaaaaccccctgtagatgagacgggaaaaccattgtatggagatgta
tttggaacaaatgctggtgatttccaggctaaaactgaagaagaggagattgaccgcact
ccttggggagagctggaaccttctgatgaagaatcttctgaggaagaggaagaggaaagt
gatgaggaaaagcctgacgaaactggctttatcactccggctgacagtggacttatcaca
ccaggtggattctcttcagttccagcaggcatggagacaccagagttgattgaactgcga
aagaagaaaattgaagaggccatggatgggaatgaaacaccacagttattcacagtgctt
cctgagaagaggcctgctacaatgggtgctgctatgatggcgtcgactcacatctatgat
gtgtctgctgcaatggcaatgagtggtcgaaagggtggcggtggacaggagcctcaaggg
gtagaagtggcactggcacctgaagaacttgagctcgacccaatggcaatgacacagaag
tatgaggagcatgtccgggaacagcaggcccaggtggagaaggaagacttcagtgacatg
gtggccgagcatgctgccaaacagaagcaaaagaaaagaaaagcacaaccacaggatatc
cgtggaggagccaaaaagtacaaggaattcaagttttag

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