KEGG   Polypterus senegalus (gray bichir): 120539253
Entry
120539253         CDS       T08668                                 
Name
(RefSeq) ras-related protein Rab-1A-like
  KO
K07874  Ras-related protein Rab-1A
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:psex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120539253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psex04131]
    120539253
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psex04147]
    120539253
   04031 GTP-binding proteins [BR:psex04031]
    120539253
Membrane trafficking [BR:psex04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    120539253
 Autophagy
  Other autophagy associated proteins
    120539253
Exosome [BR:psex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120539253
  Exosomal proteins of other body fluids (saliva and urine)
   120539253
  Exosomal proteins of colorectal cancer cells
   120539253
GTP-binding proteins [BR:psex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    120539253
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB AAA FeoB_N AAA_7 ABC_tran AAA_16 PduV-EutP Septin AAA_29 LANC_like AAA_22 AAA_5 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 120539253
NCBI-ProteinID: XP_039625088
LinkDB
Position
11:80688985..80727416
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAA
GDKPNVKIDSTPVRQSGGSCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaatcctgagtatgattacctgttcaaattgctgcttattggtgattctggagttggg
aaatcatgccttctgctacgatttgctgatgacacttacacagagagttacataagcact
attggtgtagacttcaaaatccgaacaattgaactggatggaaaaactatcaagctacag
atttgggatactgctggacaagagaggtttcgcaccattacatccagttattacagaggt
gcccatggaataatcgttgtctatgatgttacagatcaagagtcatacaacaatgtgaaa
caatggctgcaagaaattgatcgttatgccagtgaaaatgttaacaagctgctagtggga
aacaaatgtgatctgacaacaaaaaaagttgttgactataccacagctaaggaatttgcg
gactctctggcaatccctttcttagaaacaagtgccaagaatgccaccaatgtggaacag
gctttcatgacaatggcggcagagataaagaaacgcatgggcccaggagcaactgctgct
ggagacaagcctaatgtaaaaattgacagcactcctgtgaggcagtctggtggtagctgc
tgttaa

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