Polypterus senegalus (gray bichir): 120539291
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Entry
120539291 CDS
T08668
Symbol
si:ch211-168d1.3
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120539291 (si:ch211-168d1.3)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120539291 (si:ch211-168d1.3)
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
RA
SH2_1
Motif
Other DBs
NCBI-GeneID:
120539291
NCBI-ProteinID:
XP_039625151
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Position
11:complement(89104204..89158715)
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AA seq
811 aa
AA seq
DB search
MEEDPIYDSPDSQQCHPTHTRGSLNRISILDRLILTHPVWLQLSINCATALHILQREPPG
SFLVRKSNTSQKKVLCVRLADDTMPSFVRQFTIQTKDSTFSLENSAISFPDLCRLISFYC
LSRDVLPFPLILPEAIAKATSHKQLEAISHMGVEFWSSPLNFRGPRSAPSPPDLPPIHPA
DCCTPQENTTVFNEFCQLHTRSPFELDCGTGQGALCFINPLFLQEQQGKGALLKRNQFKR
SFKVRVSTENSSPLSPPAMPPPPPPLLKKEKSSTGRGNPATCSEEDSEYMLPCVAFARKA
SYNLGDVTGFSKGLPLSPTAEEEDYQMPKILQQESNKDVPEKLPPAIPGDEDLVLMLDQG
QAPSLNELDSCSSMSSLEEVEESVERPPLTRGTSSPTLPTPRHRPNMSALRKMSEVLYSF
FAPEKRIARLVEDLSRDRRTTFGMLVQDFLTLQRESREEYASSGAMLQAVRGFINEAKSL
LLDCGELEPPIETLLPDEDNEFVLEKALYRCILKPLKAHIDIRLRTFHTDDGSLQMMKNS
LQMSQEGALKRFEVKVPVPNSHGIERVRQKLTTMQKAYSPIDKIILLLQACKCIYTAMRS
GSGSDHGADEFLPALSYVLVQCNMPDLPQQVEYMMELLEPSLLTGEGGYYLTSVYASLCL
IQSPPEVQPKCLLTQEMRESIKQWSKRRGTEANNLRATRDSQKFLHVVHTEADTSEVKMV
VMKKTDSVESFMEKCAQKFGISEADSYGLFLRSEGDMRQLPLDCHLQDITSQLDSGFSLI
YQRYGQDFSKTRKLTRGGAIDLTEQLQSSTC
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatccaatctacgattcccccgattcccagcaatgtcatcccactcatacc
aggggatccctgaacaggatcagcatattggatcgcctcatccttacccacccagtgtgg
ctgcagctctccatcaactgtgcaactgctttgcatatcctgcaaagggagccaccaggg
tcctttctagttcgaaagtcaaatacatcccagaagaaagtcttgtgtgttcgccttgct
gatgacaccatgccatcatttgttcgccagttcactatacagaccaaggactccactttc
tctttggagaactctgctatcagcttccctgatctgtgtcgtctcatttcattttactgc
ttgagcagggatgttttgcctttcccccttattttgcctgaagccattgcaaaagcgacg
tctcacaaacaactggaggcaatctcgcacatgggagtagaattttggagttcgccctta
aatttccgaggaccacgcagtgccccaagccctccagacctgcctccaattcatcctgca
gactgttgcactccgcaggaaaacaccaccgtatttaatgaattctgtcagctccatacg
cgcagtccctttgaattagactgtggcacaggacagggggccctctgtttcatcaatcct
ctctttttgcaagaacagcaaggcaaaggtgctctgctgaagcgcaaccagttcaaacga
agcttcaaggtgcgcgtttccaccgagaactcgagtcccctttccccgcctgctatgcca
cctcctccaccgcctctgctaaaaaaagagaaaagctcgactgggagaggaaatccagca
acatgtagtgaagaagattcagagtacatgcttccctgtgttgcctttgcaagaaaggcc
agttacaacctgggggacgtgactggattttccaaagggttgcctctttcaccaactgct
gaggaggaagactatcagatgcccaaaattcttcaacaggaaagtaataaagatgtccct
gaaaagctgccacctgctattcccggagatgaagatctagtcctgatgttagatcaagga
caggcgccatctctgaatgaactggacagctgcagctcaatgagcagtctggaggaagta
gaagagagtgtagagagaccccctctcacccgtggcaccagttctccaactctgccaact
cccagacatcgcccaaacatgtcggcattgcgaaagatgagtgaggtgctctattccttc
tttgctcctgaaaagcgaattgcccgactggtagaggatttatcccgggaccggcggaca
acgtttggcatgctggtacaagactttctaactctgcagagggagagccgtgaggaatat
gcctccagtggagctatgctgcaggctgtgcgagggttcatcaatgaggccaagagcttg
ctgctggactgtggggagctggagccacccattgaaacacttcttccagatgaggataac
gagtttgtgcttgaaaaggccctctaccgctgcattttaaagcccttgaaggctcacatt
gacatacgtctgaggacatttcataccgacgatggttccctgcagatgatgaagaacagt
ctgcaaatgagccaggaaggagctctaaagcgctttgaggttaaagtgccagtcccaaac
tcccatggaattgaaagagttcgtcagaagctcaccaccatgcagaaggcctattctcct
attgacaaaatcatcctgctgttacaagcctgcaagtgcatatatactgccatgaggtct
ggatctgggagtgaccatggagcagatgagttcctgccagctctgtcctatgtcctagtg
caatgtaacatgcccgaccttcctcagcaagtggagtacatgatggagttactcgagccc
tccctattgacaggcgaaggtggctactacctaacaagtgtgtatgccagtttgtgccta
atacaatcaccccctgaagtccaacccaaatgtttactcacacaggagatgcgtgaatct
atcaagcagtggtcaaaacgcagggggactgaggccaacaatttaagagctacacgggac
agccagaaattcctgcatgttgtccacacagaggccgataccagcgaggtgaaaatggtg
gtcatgaaaaaaactgactctgtggaatcttttatggaaaaatgtgctcagaaatttgga
atctcagaggccgacagttacggcctctttctacgctctgaaggagacatgcgccaactt
cctctggactgtcaccttcaagacattaccagccagctggactcaggcttctctcttatc
tatcagcgttacggacaggatttcagtaagacgcgcaaacttaccagagggggcgctatt
gatttaacagaacaactacagtccagcacttgttaa
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