Polypterus senegalus (gray bichir): 120539343
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Entry
120539343 CDS
T08668
Symbol
vps51
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120539343 (vps51)
Membrane trafficking [BR:
psex04131
]
Protein recycling
Others
EARP complex
120539343 (vps51)
Endosome - Golgi transport
Tethering complex
GARP complex
120539343 (vps51)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
COG2_N
EXOC6_Sec15_N
YxiJ
COG5_N
Vps53_N
Baculo_PEP_C
TMTC_DUF1736
Occludin_ELL
GIT_CC
Fib_alpha
DUF2115
DUF4239
Motif
Other DBs
NCBI-GeneID:
120539343
NCBI-ProteinID:
XP_039625268
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Position
11:97963545..97986145
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AA seq
782 aa
AA seq
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MATVGSTDAVGADPIPKRRVHGMLKLYYGLNEEGKPEEKGDPLDPCDIDGAHFEPEVYLN
KLRKECTLAELMDQETNMVKHIRSLDSDMQTLVYENYNKFISATDTIRKMKNDFKKMEDE
MDCLATNMTAITEFSARISSTLQDQHQQITKLSGVHMLLRKLQFLFELPARLNKCIELEA
YVQAVSYYGKARSVLHQYQHMPSFQGIQNDCQSIMAQLAQRLRDKFQDGGSSAKDLSECV
ELLLKLDEPAEELCDKFLSHAKSRLEEDLAGLEADLGVSNVALGTSSDILEFIDRGCNDF
VGNLCLLIASYQDLFVNRLQDGALASKNIPQMANAKLLAFVNDLVDRYFCLVECRIQAEK
GVGDNSLLVRALDRFHRRLQALTKLLPGSNVPSKGTEIVVRAARERIRQYLAALQSFYMD
SLTDVRQSLAAQRLSGKDSANLAELLSTLSASILNQIKSVLAYVHLFTAKDINFSNKPYF
KGEFCSQGVREGLIVSFIKYICQSSRQFCESSGDKGGSTPPALLLLLSRLCLDYETSTIS
YILTLTDEQFLGQDQTPVTPVTALCSEAREAAQKLLNYYVKVQGLIISQMLRKSVETRDW
INTIEPRNVRAVMKRVVEDTTSIDVQVGLLFEEGVRKAHSSDSSKRTFSVYSSSRQQARY
APSYTPSAPMDTNLLSNIQKLFSERIDIFSPVEFNKVSVLTGIIKISLKTFLECVRLRTF
GRYGLQQIQVDCYYLQLYLWRFVSDENLVHFLLDEIVGSSAHRCLDPSPMEQSVIEVICE
RG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttggtagtactgatgcagtgggggcagacccaataccgaagcgtcgagtg
catggaatgttgaaattgtactacggcttgaatgaagaaggaaagcccgaggagaaaggc
gatccattggatccgtgtgacatcgacggggcccatttcgagcctgaagtttatctgaat
aaactgcgtaaggagtgtactcttgcagagctgatggatcaagaaactaacatggtcaaa
catatccgttctttggacagtgacatgcagacccttgtgtatgaaaactacaacaaattt
atctctgctacagatacaatccgtaaaatgaagaatgactttaagaagatggaagatgag
atggattgcttagcaacaaacatgactgccatcacagagtttagtgctcgaattagtagc
actctgcaagatcagcatcagcaaataaccaaactctctggggtacacatgcttttgcgg
aagctgcagtttctctttgagttgccagcacgtctcaacaaatgtatagaattagaggcc
tatgtgcaggcagtatcctactatggcaaggcacgatcagtactgcaccagtatcagcat
atgccctcctttcaaggtatccaaaatgactgccaaagcatcatggctcagcttgcacag
agactaagagataaatttcaagatggaggttcaagcgcaaaagacttgtcagagtgtgtt
gaactactactgaaattagatgaaccagcagaagaactttgtgacaagtttctaagtcat
gcaaagtctcgtttagaagaggacctagcagggctagaggctgatttaggagtttcaaat
gttgctcttggtactagctcagacattctagaatttattgaccgaggctgcaatgacttt
gttggaaatttgtgcttattaattgcctcttaccaggacttatttgttaaccggcttcaa
gatggagccttagcatccaaaaacattccccagatggcaaatgccaaattgctggctttt
gtcaatgaccttgtagaccgttacttctgtcttgtagaatgtaggattcaggcagagaaa
ggtgttggtgacaattcattattagtcagagctcttgaccgcttccaccgaagactacag
gccctgacaaagcttctgcctggatccaacgttccctctaaagggacagagattgtagtc
cgtgcagcacgtgaacgtatccgtcagtacctagcagcacttcagagcttttatatggac
agtttgactgatgttcgccagtcccttgcagctcaacgtctttcaggaaaagatagtgcc
aacctagcagaactgctgagcacgctgtctgcatctattctcaaccagatcaagtcagtt
ttggcttatgtccatcttttcacagctaaagatattaatttttccaacaaaccttacttt
aagggtgagttttgtagtcaaggtgttcgagaaggactcattgttagcttcattaagtac
atctgtcagtcgtcacggcagttttgtgaatcatctggtgataagggagggtccactcct
cctgctctacttctcttgttgtccagactgtgtctggactatgagacatctactatcagc
tacatccttacactaacagatgaacagtttttgggacaggatcaaaccccagtaacgcct
gttactgccttgtgttctgaggctcgtgaggctgcccaaaagctgttgaattactatgtg
aaagtccaaggcctcatcatctcccagatgctgcgcaaaagtgttgagacacgtgattgg
atcaacaccatagagccacgaaatgtgcgtgctgttatgaagagggttgtagaggataca
acctccattgatgtgcaggtaggactgctgtttgaggaaggtgtgcgaaaagcccacagc
agtgattccagcaagagaactttttctgtttacagtagctctcgtcagcaggctcgatat
gcacccagctatacaccaagtgctcctatggacaccaatctgttaagcaacatccagaag
ctgttctctgagaggattgacatttttagtcctgtggagttcaacaaggtgtctgtattg
actggcattatcaagatcagtttgaagaccttccttgaatgtgttcgactgcgcaccttt
ggacgttatggtttgcagcaaatacaggttgactgttactacctgcagctctacttgtgg
cgttttgtgtcagatgagaatcttgttcacttcctgttggatgagattgttgggagtagt
gcccaccgctgtctggatccctccccaatggagcaaagcgtcattgaagtcatatgtgaa
cggggttaa
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