KEGG   Polypterus senegalus (gray bichir): 120539399
Entry
120539399         CDS       T08668                                 
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
  KO
K12327  caldesmon
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:psex00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    120539399 (cald1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psex04812]
    120539399 (cald1a)
Cytoskeleton proteins [BR:psex04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     120539399 (cald1a)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 120539399
NCBI-ProteinID: XP_039625351
LinkDB
Position
11:complement(104207530..104512027)
AA seq 612 aa
MDDFERRRELRRQKREEMRLEAERLAYQRNDDDEEEAARERRRRARQERLRNKDDDEPTI
LNTDKAEVNNQNSLTEDEPKNAKETAETTEEDTALLEKLARREERRQKRLQEAMERQREF
DPTISDHKVTTTEEKVEVRRGRYGEEDVEEKTEIKTYQYNDWREKEEEKREEEKVEEPVQ
EEEEEEEEAEEEQVEEEPQEKIIEEMKDEIEENQKHFRLREEKMDEKPKRSFMREEEAIE
EKPKKPLLQEEVIEEKPKRSYLRDEINEEKVTREKEVDTIHHKKKDQSEMKHQNGDDFYE
DTSNKYKKIERSISVKSNPETEEQDAVARLEAERKLEELRRRRDETESEEFEKLRLKQQE
AEVELEELKRKREERRKILEEEEDRKKQEEAEKKAKEEEEKRRMKEEIERRRAEAAEKRQ
KIAEDSSSDGQEKKPFKCVSPRGSSLKIGERAEFLNKSAQKSVKASHAPVVSKIDNKLEQ
YTTAVQTNKETKSAKPAAADLPVVGDGVRNIKNLWEKGDVFSTAGNPGTPNKETAGLKVG
VASRINEWLTKTPESNKAPGGKPADLKAGDVTNKRSLWENKASSPEKSSSSAKVAVGRQS
KSVTNAGMGHLP
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggatgattttgagcgccgccgtgagctcaggagacagaaacgtgaagagatgcgactt
gaagctgaaagattggcttaccagagaaatgacgatgatgaagaagaagcagctcgtgaa
agacgccgcagggctcgtcaggaaagattacgcaacaaagatgatgatgagccaaccatc
ttgaacacagacaaggctgaggtcaataatcagaacagtctgactgaagatgaacctaaa
aacgccaaagaaacagcggaaacaacagaggaagacacagctctactagaaaaactggcc
agacgagaagaaagacgtcaaaaaaggctgcaggaagctatggagagacaaagggagttt
gatcccaccattagtgatcataaagtgacaactacagaagagaaagtagaggtgagaaga
ggccgctatggagaggaagatgtcgaggagaaaacagagataaagacttaccaatataat
gactggagagagaaggaagaagagaaaagggaagaggagaaagttgaagaaccagttcag
gaggaggaggaagaagaagaagaagcagaagaagaacaggttgaagaggaaccccaggaa
aaaatcatagaagagatgaaggatgaaattgaagaaaatcagaaacatttccgtctaaga
gaggagaagatggatgaaaagccaaaaagatcttttatgagagaggaggaagcaattgaa
gaaaaaccaaagaagcctcttctgcaagaagaggttattgaagaaaaaccaaagaggtct
tacttgagggatgagattaacgaggagaaagtgaccagagaaaaggaggttgacaccatt
catcataagaaaaaagaccaatcagaaatgaaacatcaaaatggagatgacttttatgaa
gacacaagtaacaagtataagaaaattgagagaagtattagtgtgaagtcaaatcctgag
acagaggagcaagatgcagttgctcggcttgaagcagaacgcaagctggaggaactacgt
cgtcgccgggatgaaacagaaagtgaagaatttgagaagctgaggttaaagcagcaagaa
gctgaagttgagctggaggagttgaaaagaaagagggaggaaaggagaaaaatcttggag
gaagaagaagaccgcaagaaacaagaagaggctgaaaagaaagccaaagaagaggaggag
aagagaagaatgaaggaagaaattgagaggagacgagcagaggctgctgagaaaaggcaa
aaaattgctgaagattcttcatcagatggtcaagagaagaagccatttaaatgtgtcagt
ccacggggatcttctctaaagattggagaaagggctgaattcctcaataaatcagcacag
aagagtgttaaagcctcacatgccccagttgtttcaaagattgacaacaagttggagcaa
tataccacagctgtccagaccaacaaagagaccaagtctgctaagcctgctgctgctgat
ctgcctgtagttggtgacggcgttcgtaatattaagaatctctgggaaaagggtgatgtg
ttcagcaccgctggaaaccctggaacacccaataaggaaacagctggtcttaaagttgga
gtggcaagtcgtatcaatgaatggctcactaaaacgccagaaagtaacaaagcaccagga
ggaaagcctgctgacctcaaggcaggagatgtaacaaataaacgtagcttatgggaaaat
aaagcctcttctccagaaaaatccagctcatctgccaaggtggcagtgggacgccagagt
aaatcagttaccaatgcaggaatgggacacctaccctag

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