Polypterus senegalus (gray bichir): 120539675
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Entry
120539675 CDS
T08668
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120539675 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120539675 (nup50)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120539675 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
120539675
NCBI-ProteinID:
XP_039625939
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All DBs
Position
11:complement(163886676..163960053)
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AA seq
464 aa
AA seq
DB search
MAKRTADKELNDRNWDQEDEEEEAGMFSVASEDVIKNRTIKKAKRRSISIEPEIGGAFKN
FRGFSQMCPGEKVSGFGNVSSFKGLPGLSNGSRGAFGATAASDVKTISGPLNFNGPSSSQ
LVTNDASSKSNGVTQSSSVPNSSQNKTTINQEYNKQLAALNRCVRDWITKHVNDNPLCDL
SPIFKDYEKHLASIEQKYGSNFDNTESNTSTRQSELAAAQVPVFSKAQEAPASTLFSASD
QKEGVTSNIKAVAPTVSTANVTFQFGKKVDNAVLGTLPASKLASSFTFTTQCNTMTLFGS
QATPSPSSASVVPVPKVDSDNGSSEKGEKSEDDEKAEEAEKHVFNEVKEEDAFYSQKCKL
FYKKDNEFKEKGIGTLHLKAIADKKNQLLVRADTNLGNILLNIMLHSSIPCTRAGKNNVM
IVCVPNPPLDEKTPASPVPMLIRVKTSEDADELHKIITEKKESS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggacagcagataaagaattaaatgacagaaactgggatcaggaggatgaa
gaagaggaggcaggaatgttctctgttgctagtgaagacgtcattaaaaaccgaaccatc
aaaaaggcaaagcgcaggagtatatctattgagcctgaaattggaggagcttttaagaat
ttcagggggttctcacagatgtgtcctggagaaaaagttagtggttttggaaatgtgtcc
agttttaaaggactcccaggactttccaatggaagcagaggtgcatttggtgctactgct
gcttctgatgtaaagacaatatctggccctttaaacttcaatggcccatcctcttcccag
cttgtgacaaatgatgccagttccaaatctaatggagtgactcaatctagctcagtccct
aactcctctcagaataaaaccaccatcaatcaggagtataataagcaacttgctgctctg
aaccgctgtgtacgggactggatcacaaagcacgtaaatgacaacccactatgcgatctg
agccccatctttaaggattatgagaaacacttggctagcattgaacaaaaatatggcagt
aactttgacaacactgagagtaatactagcacaagacagtctgagctagctgctgcacag
gtgccagttttttctaaagcccaagaggcaccagcatccacgttgttttctgcaagtgac
caaaaggaaggcgtcacctcaaatatcaaagctgtagcccctactgtttccacagccaat
gtcacttttcagtttggaaaaaaggttgacaatgctgtgctaggaacccttcctgccagt
aaactagcatccagtttcactttcaccactcaatgcaataccatgactttgtttggaagc
caggcaacaccatcaccatcatcagcttcggttgtaccagttcccaaagtagacagtgac
aatggcagtagtgaaaaaggagaaaagtctgaagatgatgaaaaagcagaagaagcagaa
aaacatgtttttaacgaagtaaaagaggaagatgcgttctactctcaaaagtgtaagttg
ttctataagaaagacaatgaatttaaagaaaaaggcattggaacactacatctaaaggca
attgctgataaaaaaaaccaacttttagtccgagcagatacaaatctgggaaacatcctg
ctgaatataatgctacattcttcaattccttgtaccagagctgggaaaaataatgttatg
attgtatgtgttcctaatcccccactggatgagaagaccccagctagccctgttcctatg
ttaatccgagtgaagacatcagaagatgctgatgagttgcacaaaattataacagaaaag
aaggaatcatcttag
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