Polypterus senegalus (gray bichir): 120539932
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Entry
120539932 CDS
T08668
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120539932 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120539932 (myo5aa)
04131 Membrane trafficking [BR:
psex04131
]
120539932 (myo5aa)
03029 Mitochondrial biogenesis [BR:
psex03029
]
120539932 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120539932 (myo5aa)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120539932 (myo5aa)
mRNA cycle factors
P-body specific factors
120539932 (myo5aa)
Membrane trafficking [BR:
psex04131
]
Others
Actin-binding proteins
Myosins
120539932 (myo5aa)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120539932 (myo5aa)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120539932 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
nSTAND3
AAA_16
NPHP3_N
Myosin_N
Motif
Other DBs
NCBI-GeneID:
120539932
NCBI-ProteinID:
XP_039626225
LinkDB
All DBs
Position
12:149917376..150157003
Genome browser
AA seq
1898 aa
AA seq
DB search
MAASELYTKEARVWIPDAEDVWKSAKLLKDYKQGDKLLRLELEDGTVVEHQLDPRTMNLP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLPIYG
TDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSESEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSNLPELKVLKLVSANNFHYTKQGRSPVIDGVD
DAKELINTRNAFTLLGINDSYQMGIFRVLAAILHLGNVEIKDRDSDSSIIPPNNAHLTVF
CDLMGVTYQDMSHWLCHKKLITATETYIKPFPKLQAINARDALAKHIYAKLFSWIVDHVN
KALHATMKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
EIPWTLIDFYDNQPCINLIEAKLGILDLLDEECRMPKGSDDTWAQKLYNTHLNKCDLFQK
PRLSNRAFIIQHFADKVEYQCEGFLEKNKDTVYEEQIHVLKLSKKFELLVELFQDEEQSV
SPTEAQTGARTRLSVKPLKARATQSSREHKKTVGHQFRNSLQLLMETLNATTPHYVRCIK
PNDYKYPFTFDPRRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD
RKLTCRNVLEKLIKDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRCWLL
RKKYLRMRSAAITIQRHVRGYQARCLAKFLRRTRAAITIQKFQRMYVARQRYRRMQDASL
IIQCMLRGYVARQKYQQMVREHKAVIIQKMVRGWLARQWYKRSLEAIVYLQCCVRRMRAK
RELKKLKIEARSVEHYKKLNIGMENKIMQLQRKVDEQHKDNKNLHDRLTNLENTYSSESE
KLRNEVDRLRGTEEEARVNSNRITSLLEELAKLKKELEETQREKKTIEEYADKYKVETEQ
LVSELKEQNTLLKTEKEDLNRLILEQAQEMKEKMEKALVEETKQIECELNEERSRYQNLL
TEHLHLEARYEDLKEEMTLTMVIPKPGHRRTDSTHSSNESEYTYNSEFAEREEEASRGPE
DVPKAPLDMSLFLKLQKRVTELEQDKQSLQNELDRKEEQIHRIKATEEEQRNRARGAELE
YESLKRQELESENKKLKNDLNELRKVLSEKPTAAISAPGSPAYKVLLDQLNASNEELEVR
KEEVLILRSQLVSQKEAMQHKEDKETMTEAMFYAEDLQKMKDSGEITQAYLGLKEVNRSP
KFSSKPVEVGDLLSRIRSPPKDYHELNEDGELWMVYEGLKETNRLLESQLQSQRKGYENE
AEVLRGELQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYAEDP
RKYQFYRISLYQRIIDLMEQLEKQDKTVRKLKKQLKLFAKKIGEMGVFNQVENVSPGQIV
DEPIRPVNIPRKEKDFQGMFEYKKDDEVKLVKNLILELKPRGVAVNLIPGLPAYILFMCL
RHADYLNDDQKVRSLLTSTINGIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGF
MKHNTTRQNEHCLTNFDLAEYRQVLSDLAIQIYQQLVKVMDSILQPMIVSGMLEHETIQG
VSGVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGMDPELIKQVVKQMFYIIG
AVTLNNLLLRKDMCSWSKGMNIRYNVSQLEEWLRDKNLMTSGAKETLEPLIQAAQLLQVK
KKTDEDAEAICSMCNALSTAQIVKVLNLYTPVNEFEERVSVTFIRTIQIRLRDRKESPQL
LMDSKQIFPVTFPFNPSSLSLETIQIPTSLNLGFLTRV
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtccgagctttacactaaggaggccagggtttggatccctgatgctgaagat
gtatggaaatcagcaaagcttcttaaggactacaagcagggtgataaactactccgcctg
gaactggaggatggcacggtggtggaacaccagttggatcccaggaccatgaatctgcct
catcttcgcaaccctgacatcttggttggtgaaaatgacctcacggctctcagttacctc
catgagcctgctgtcctgcataacctcaaagtgcgctttatagattccaagcttatttac
acctactgtggtatcgtcttggtggccatcaacccatatgaaactttacccatctatggc
acagatattatcaatgcttacagtggacagaacatgggcgacatggaccctcatatattt
gcagtggcagaagaggcttataaacaaatggccagggatgagcggaaccagtctataatt
gtcagcggtgaatcgggcgctggtaaaactgtatctgccaagtatgcaatgagatacttt
gcaacagtcagtgggtcggaaagtgaggccaatgtggaggagaaggtgttggcctcaaac
cccatcatggagtcaataggtaacgccaaaactaccaggaatgacaacagtagccgtttt
gggaaatacatcgagatcggatttgacaagaggtacaggattattggtgccaacatgaga
acttacctgctggagaagtccagggtggtgtttcaggccgatgaagagaggaattatcat
attttctatcaactgtgcgcatcatcaaacttgccggagcttaaagtcctcaagctagtc
agtgcaaacaatttccactacacaaagcagggtcgcagccccgtaatcgatggtgtggat
gatgcaaaagagctgatcaacacgaggaatgccttcacattattaggtatcaatgactcc
taccagatgggcatcttccgcgtccttgctgctatactgcacttggggaatgtggagatt
aaagatcgggattcagacagcagcataatccctcccaataatgcccacctgactgtattc
tgcgacctgatgggagtgacatatcaggacatgtcccactggctctgccacaagaagctt
ataacagccacagaaacgtatatcaagccttttcccaagctgcaggcaatcaatgccagg
gatgcccttgccaaacacatttatgccaaacttttcagctggatagtggatcacgtgaac
aaagccctgcatgccactatgaagcagcattctttcattggggtgcttgacatctatggg
tttgaaacttttgagatcaacagttttgaacaattctgtattaattacgcaaatgagaag
ctgcaacaacagttcaatatgcacgtgtttaaactggaacaagaagagtacatgaaggag
gagatcccctggacgctgatcgacttctatgacaatcaaccttgcatcaacttaattgaa
gccaagctgggaatcttggatttgctggatgaagagtgcaggatgccaaaaggatctgat
gatacctgggcccagaaattatacaacactcacttgaataaatgtgacctgtttcagaaa
cctcgcctctcgaatcgcgcctttataattcagcactttgccgacaaggttgaatatcaa
tgtgaaggatttctggagaagaacaaagacaccgtttatgaagaacagatacatgtgcta
aagttaagcaagaagtttgaacttctagttgaattattccaagatgaggagcaatcggtt
agccccacagaggctcagacaggggcccgaactcgactcagtgttaaaccactcaaagca
cgagccactcagagcagccgggagcataagaaaacggtgggccaccagtttcgtaactca
ctgcagctgctaatggaaaccctgaatgccaccacaccccactacgtccgctgcatcaag
ccaaatgactacaaataccctttcacatttgatcccaggagagcagtacagcagttaaga
gcctgtggtgttttggaaaccattcggatttctgctgctggcttcccttccaggtggacc
tatcaagagttcttcagccgatatcgtgttttaatgaagcagaaagatgtgttgagcgat
cgaaagctgacctgcaggaacgtcctggaaaagctcatcaaggataaggataaatatcag
tttggaaaaacgaaaatttttttccgggctggtcaagtggcctacttggaaaaactgcga
gcagacaagttgcgtgcagcctgcattcgcatccagaaaactatacgctgttggctgcta
cgcaagaagtacctgcgcatgcgaagtgctgccatcaccatccagaggcatgtccgaggc
taccaggcacgatgcctggccaaattcctacgccgaacaagggctgccattaccatccag
aagtttcagcggatgtatgtggctcggcagcgataccggcgcatgcaggatgcatctctc
atcatccagtgcatgcttcggggttatgtggccagacagaagtaccagcagatggtgcgt
gagcacaaggcggtcatcatccagaagatggtgcggggctggctggcccggcagtggtac
aagcgctccttggaggctattgtttacctgcagtgttgtgtcaggcgcatgcgggccaag
agggagctgaagaagctgaaaatcgaggcgcgctctgtggaacactacaaaaagctcaat
atcggcatggaaaacaaaattatgcagctgcagcgcaaggtggacgagcagcacaaagac
aacaagaacctacacgatcgtctgacgaacctagagaacacctattcatccgagagcgag
aagctgcgtaatgaagtggatcgtcttcgcggtactgaggaggaggcgagagtcaactct
aatcgtataacttctctgctggaggaactggcaaaactcaagaaggagcttgaagagaca
cagagggagaagaaaaccattgaggagtacgctgacaagtacaaggtggaaactgagcag
ctggtgtcagagttgaaggagcagaacactttactgaagactgaaaaagaggaccttaac
cgtcttattctggagcaggcgcaggagatgaaagagaaaatggagaaggctttagtggaa
gagaccaagcaaatcgaatgcgagctgaacgaggaacgatcccgataccaaaacctgctc
acagaacacctgcacttggaggcgcgttatgaggacctgaaggaggaaatgacgttgacc
atggttataccaaagccaggacacaggagaacggattctacccacagcagtaatgagtca
gagtacacttataactcagaattcgctgagcgagaggaggaggcatcacggggacctgag
gatgtccctaaagcacctttggacatgtccctcttcctgaaactgcagaagcgggtaaca
gaactggaacaagataaacagtcgctgcagaacgagctcgacaggaaggaggagcagatt
caccgcatcaaagcaacggaggaagagcaacgaaacagagcacgaggagcagaactggaa
tatgagtcacttaagcggcaagagttggaatctgagaacaaaaagttaaagaacgatctg
aatgagctgcgaaaagttctgtccgagaaaccaacagcagccatctctgcgccgggctcc
cctgcctataaggttctcctcgaccagctaaatgcatccaatgaggaactggaggtccgt
aaggaggaggtcctgatacttcgctctcagctagtcagccaaaaggaagccatgcaacat
aaggaggataaggagaccatgacagaagccatgttctatgcagaggatctacagaagatg
aaggattctggtgaaataactcaggcgtatcttggccttaaagaagttaacagatcgccc
aaattcagctctaagcctgttgaagtcggtgatctcttgagtaggataagatccccccct
aaggactaccatgagctgaatgaggacggagagctttggatggtttatgaagggttaaag
gaaaccaacaggctcctggaatctcagctccagtcccaaagaaagggttacgaaaacgag
gcggaagttcttcgtggggagctgcagagcctgaaggaggagaacaaccggcagcagcag
cttttggcacaaaacttacagttgccccccgaagcccgcatagaggcgagcctccagcat
gaaatcacccgactgaccaatgagaacctgtactttgaggagttatatgccgaggaccct
aggaagtatcagttttaccggatttcactttatcaacggattattgatctcatggagcag
ctggaaaagcaggacaagactgtccgcaaacttaagaagcagttgaaactgttcgccaag
aagatcggagaaatgggagtgttcaatcaagtggagaacgtgtctcctggccaaattgtg
gacgagccaatccgcccagtgaacatccccagaaaggagaaggacttccaaggaatgttt
gagtacaagaaggacgatgaagttaaactggtgaagaatctgattctagagctgaagcca
aggggcgtggctgttaacctgataccaggcttaccggcctacatcctcttcatgtgtctc
aggcatgccgactatttgaacgatgaccagaaggtgcgaagtttgttaacctcaactatc
aatggaatcaagaagatcctgaagaaaagaggagatgactttgaaacagtctccttctgg
ttgtctaatacttgtcggttcctccactgtttgaagcagtacagcggtgaagaggggttc
atgaagcacaacacaacccggcagaatgaacactgtcttacaaactttgatttggcagag
tataggcaggtcctgagtgatctggccattcagatttaccagcagcttgtgaaggtgatg
gacagcatacttcagccaatgatagtttctggaatgctagaacacgagaccattcagggg
gtctctggagtgaagcccacaggtttacgcaaacggacatcgagtattgccgatgaaggc
acctacacgctcgactcaatcctgcgccagctcagcgccttccactctacaatgtgccag
catggcatggacccagagcttatcaaacaggtggtcaagcagatgttctacatcatcgga
gcggtcaccctcaacaacctgcttctgcgcaaggacatgtgctcctggagcaaaggcatg
aatatcaggtacaatgtaagtcaactggaagagtggttaagggataaaaacttgatgacg
agcggtgccaaggagaccctcgaaccgttgatccaggcggctcagcttctacaagtgaag
aagaagactgatgaggatgcagaggccatatgttcaatgtgcaatgcactaagcacagct
cagattgtcaaggtgttgaatttatacacgccagttaacgaatttgaagaaagggtgtct
gtaacatttatacgtaccattcagatacgtttacgagaccggaaagagtcacctcagtta
ctcatggactccaaacaaatcttccctgttaccttcccattcaacccctccagtctttct
ctagaaaccattcaaatcccaaccagtctcaacctgggattcctcactcgagtctaa
DBGET
integrated database retrieval system
