Polypterus senegalus (gray bichir): 120540039
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Entry
120540039 CDS
T08668
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120540039 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120540039 (gtf2f1)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120540039 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
120540039
NCBI-ProteinID:
XP_039626427
LinkDB
All DBs
Position
12:complement(159272074..159299912)
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AA seq
521 aa
AA seq
DB search
MTTLGTSGTSSTEYTVRVPKNTNKKYNIMAFNVGDKVNFSSWTQAKMERDLSNKKMYQEE
EMPDSGAGSEFGKKQREESRRKKYGIITREFRAEDQPWLLRVNGKAGRKFKGQKKGGITE
NASYYIFTQCPDGAFEAFPVNAWYNFIPIAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLRDHDRDDGDEDEEEKKGGKKKKKKKGSELKIHDLEDDLEMSSDESDDSEAEGGQKEPK
KKKVVNKKKKKKGSDSEAIEDSDDGDFEGLEVDYMSDESSSEEDEPTTTKTNDVPKGIDE
ASESSEESEEEKQNEEDKKEEEEDGKKTPVQQEKKKKKDSSDESDSSEESDIDGEASSAL
FMTKKRTPPKKPSGKGSAGSSRTSSRPGTPSIESGNTSSTLRAAATKLEQGKRQGQSNSD
TPAAKRLKMDANPQSPSGKSTPQPQSGKSTPSSSDIQLTEDAVRRYLIRKPMTTKDLLKK
FQTKRTGLSSEQTVNVLAQILKRLNPERKSINDKMHFFLKE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgactacgctgggaaccagtgggacgtcatctactgagtacactgtccgagtccccaag
aataccaataagaaatacaacatcatggccttcaatgttggggacaaagttaacttttcc
agttggacgcaggcaaaaatggaacgtgatctgagtaacaaaaagatgtatcaggaggaa
gaaatgccagattctggagcaggaagtgagtttggaaagaagcaaagggaagagtcccgg
cggaaaaagtatggcataataacacgagagtttcgagcagaagaccaaccgtggctgctg
cgcgtcaatggtaaagctggtcgcaaatttaaaggtcagaaaaagggaggcataacagaa
aatgcctcctactacatctttacacagtgtccagatggagcattcgaggccttcccagtt
aatgcctggtacaactttattccaatcgccaaacacaggacgctaactgcagaagaggca
gaggaagaatggggcaggaggaataaggtggtgaaccatttcagcattatgttgcagcgg
cgtcttagggaccacgacagagatgacggagatgaggatgaagaagaaaagaaagggggg
aagaaaaaaaagaagaagaaaggctcagaactgaaaattcatgacctggaagatgatctg
gagatgagcagcgatgagagtgatgatagtgaggctgaaggtggacagaaggagcccaag
aaaaagaaggtcgtaaacaagaaaaagaaaaaaaaaggttcagacagcgaagctatagag
gacagtgatgatggcgattttgagggattagaggttgactacatgtccgatgaaagcagc
tctgaagaagacgagccaacaactacaaaaacaaatgatgttcccaaaggaattgatgaa
gcatcggaaagcagtgaggagagcgaagaagagaaacagaatgaagaggataaaaaggaa
gaagaagaagatggaaaaaaaactcccgtgcagcaggagaaaaagaaaaagaaagacagc
agcgatgagtcagactcttccgaggagagcgatattgacggagaggcatcgtctgcgctt
ttcatgacgaaaaagcggactccgcctaagaagcccagcggcaagggttcagcaggaagc
tcgcggacgagtagccgccccggcacaccttccatagaatctggaaacacgtcttccacc
ctgagagctgcagccaccaagttagagcaaggaaaacgtcagggacagagcaactctgat
acacctgccgccaagaggctgaaaatggacgcaaacccacagagcccttcaggaaaatcc
acccctcagccgcagtctgggaaatccacccctagcagcagtgacatccagctcacagaa
gatgctgtccgcaggtatctaatccgaaagccaatgaccactaaggacctactgaagaaa
tttcagacgaaacgcacggggctgagcagtgagcagactgtcaacgttttggcccagatt
ctgaaaaggctcaaccctgagcgtaagagcataaacgacaagatgcactttttcctaaag
gagtaa
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