Polypterus senegalus (gray bichir): 120540276
Help
Entry
120540276 CDS
T08668
Symbol
raf1b
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
KO
K04366
RAF proto-oncogene serine/threonine-protein kinase [EC:
2.7.11.1
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04010
MAPK signaling pathway
psex04012
ErbB signaling pathway
psex04068
FoxO signaling pathway
psex04140
Autophagy - animal
psex04150
mTOR signaling pathway
psex04210
Apoptosis
psex04218
Cellular senescence
psex04270
Vascular smooth muscle contraction
psex04370
VEGF signaling pathway
psex04371
Apelin signaling pathway
psex04510
Focal adhesion
psex04540
Gap junction
psex04625
C-type lectin receptor signaling pathway
psex04810
Regulation of actin cytoskeleton
psex04910
Insulin signaling pathway
psex04912
GnRH signaling pathway
psex04914
Progesterone-mediated oocyte maturation
psex04916
Melanogenesis
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
120540276 (raf1b)
04150 mTOR signaling pathway
120540276 (raf1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120540276 (raf1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psex01001
]
120540276 (raf1b)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120540276 (raf1b)
Protein kinases [BR:
psex01001
]
Serine/threonine kinases: TKL group
RAF family [OT]
120540276 (raf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
RBD
C1_1
Kinase-like
zf-RING-like
ABC1
Pkinase_fungal
TUG-UBL1
C1_2
Motif
Other DBs
NCBI-GeneID:
120540276
NCBI-ProteinID:
XP_039626824
LinkDB
All DBs
Position
12:complement(39179835..39285126)
Genome browser
AA seq
644 aa
AA seq
DB search
MEQIQGAWKTLSNGFGLKDSVFDSPSCATPTFAQDFGFQRRSSEDGKISDQSRASSTIRV
YLPNQQRTVVNVRPGMTLHDCLIKALKVRGLQPECCAVFRLLHGQRSKKSRMDWTTDATS
LIGEELLVDVLDHVPLTTHNFVRKTFLKPAFCDICQKFLLNGFRCQTCGYKFHEHCSTRV
PTMCVDWSNIRQLLLFPNPNEAGSMTLPTPNPRRTRDCSSRFTGSSLHRHSTPHAFNYIT
PYPATEGTLSQRQRSTSTPNVHMVDCLTASPTSWCHRFCPRGRDVIRNQESGSPPDLSPT
GWSQTKTPVPAQRERAVASNTQEKNRIRQRGQRDSSYYWEIEAAEVVLHSRIGSGSFGTV
YKGKWHGDVAVKILKVTDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKGNLAIVTQW
CEGSSLYKHIHVLETNFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVK
IGDFGLATVKARWSGSHQVEQPSGSILWMAPEVIRMQDNNPYSFQSDVYSYGIVLFELMT
GELPYRHVSNRDQIIYSVGRGVLSPDLSKLYKNCPKAMKRIVAECINPVKEERPLFPQIL
SSIELLQHSLPKINRSASEPSLHRASHTEDINLCTFTSVKVPVF
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaattcaaggtgcttggaagaccctgagcaatgggtttgggcttaaggattct
gttttcgacagtccctcttgtgcaacccccacttttgcacaggactttggtttccagaga
cgctcttcagaagatgggaaaatcagtgatcaaagccgggcaagcagtactattcgtgtc
tatctgcccaaccagcagcgcacagtggttaatgtgcgacctggcatgacccttcatgat
tgcctcatcaaagctctaaaggttcgaggactgcagcctgagtgctgtgctgttttccgg
ctgctgcatggccaaagaagcaaaaaatcccgcatggattggacaacagatgccacttct
ttaattggtgaagaactgttggtggacgttttagatcatgtgcctctcactacacacaat
tttgttcgcaaaacttttttgaagccagccttttgtgacatctgtcagaagtttttgctg
aatggcttccgttgtcagacatgtggctacaaatttcatgagcactgcagtacaagggtc
ccaacaatgtgtgtagattggagtaacattcgtcagcttctcttattcccaaatccaaat
gaagctggatcaatgacattgcctaccccaaacccgcggcgaacaagagattgcagttcc
cgtttcacaggcagctccctacacaggcattcaaccccccatgcctttaattacatcaca
ccttacccggccacagagggaactctttcccagagacaaagatccacgtccacacccaac
gtccatatggtagattgcctgactgcttcccccacttcttggtgccatcgcttttgccca
agaggacgagatgtgataagaaatcaggaatcagggagccctcctgacctgagtccaacg
ggctggtcacagacaaagacccctgttcctgctcaaagagagcgtgctgtagcctcaaat
actcaagagaaaaatagaattagacaaagaggacaaagagattccagttactactgggag
attgaagctgcagaagtcgtattgcactccaggataggctctggttcatttggtactgtt
tacaaaggaaaatggcatggtgatgttgcagtaaagatcctaaaggtaacagacccaact
cctgaacagttacaggctttccgaaatgaagtggctgtcctgagaaagacgaggcatgtg
aacatcttgctgttcatgggctacatgacaaagggcaatctagccattgtaacacaatgg
tgtgaaggaagcagtctttacaagcacatacatgtcttggagacaaatttccagatgttc
caattgattgacattgccaggcagacggcccagggcatggattacttgcatgcaaagaat
attattcacagagacatgaagtccaacaatattttcctgcatgaagggttgacagtgaaa
attggtgattttggcttggcgactgtcaaagcgaggtggagtgggtctcatcaggtggag
cagccctcgggctccattctctggatggcacctgaggtcattcgaatgcaagacaacaac
ccatacagcttccagtcggacgtttactcctatggtattgtgctgtttgaactaatgact
ggagagctgccataccgacatgtgtccaatagagaccagattatttacagtgttgggagg
ggagttttaagtccagatctaagtaagctgtacaaaaactgtcccaaagccatgaagagg
attgttgcagaatgcataaacccagttaaggaagaaagaccactcttcccacagatattg
tcatcaatagaactactgcagcactctcttcctaaaatcaaccgcagtgcctccgagcca
tcacttcatcgtgccagtcacaccgaggacattaatttatgcactttcacctctgtgaag
gtgccagtcttctag
DBGET
integrated database retrieval system
