Polypterus senegalus (gray bichir): 120540358
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Entry
120540358 CDS
T08668
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120540358 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120540358 (usp19)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120540358 (usp19)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120540358 (usp19)
Ubiquitin system [BR:
psex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120540358 (usp19)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
USP7_C2
CS
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
120540358
NCBI-ProteinID:
XP_039626977
LinkDB
All DBs
Position
12:complement(45645340..45741627)
Genome browser
AA seq
1478 aa
AA seq
DB search
MSSSTDTGGRRRPVSCKLEDNSNKKKQKDKANQESKEAKQETNRDPKKDPFIGWKQNASE
IIVKLRPGERCVKVEDVNTSFTDQSCLVKFADGCQWSCHLNEDIESSCSKVQYKEKGNIL
QLVMQKKIPFHTWPFLMKKSKESDPVLLGSDEAINASKLEHLLSEENSAEQPEMESKKGK
VDRGSKRTIKQKPAGKSETGSKVLTLKTPGSTELQVEPSGKRVICPKDQDCNSRREPLTE
NVESTKTKDISDALNQSGKTKVKIESTENSEAKQEKDTSKSTTTIKHKTELINEVKERPV
PSSHDASLQGASSDAIPPPRSDVFTTRDTSLPLPVDIDMVAFNSVRRQVVKDLNFKNSCL
EEECIKNTNLVAKDTLPNVLSKDLLAHLENEPEKGDKAKEDKMNDLSEVVSSSCQTLALE
PMVNLTFVKNDFYEKGNDVMVVSIYLKEICRETAEVFFREQDFTLIFQTSDPNFLRLHPD
CGPDTKFKWQVKLRNLINPDKCTHSFTPSRLDIFLKKRHSQRWGGLEAPTGQGAVGGAKV
AVPTGPASLEKSSPGSSQHTLPSKEEPRTGEKEKTRAEEGSLDSVSARTLTEHVPLKQEP
ALVTSQLKPTCMVQPMTHAPANNDCMDDEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSN
TRELRDYFHDRAFESEINCSNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASK
ASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQSKPYTETVDSDGRPDEVVAEEAWRRHKMR
NDSFIVDLFQGQYKSKLVCPICAKVSITFDPFLYLPVPLPQKQKVLTVFFFWKDPHKKPV
KFLVSVSKENSCTTDILESISRSVKVKPENLRLTEASESRFHRVFLPSNSLDAVSPTDTL
FCFEVQSKELAKEKVVILQVQQRTQVPNCPINKCAACQKIPHSEDEKIKRCTRCYRVGYC
NQNCQKNHWQDHKNHCRPNTESIGFPFLISVPESRLTYSRLAQLLEGYSRYSVNVFQPPF
QSGRMSPEMSQCRMEQPRLHAVVSESHNKESYLPTDEINERGKFNCVDSNIDSMAAGDCK
KNAISVSTLTLDSGYSDSISELQDHLEHEKEITCEKTLKPEAVVTGYQQPTDIGANGASQ
FYICLIDASNKEQKLEDKGDKALDIPEGSSVILVWKNNERQKEYVLVKPKELEYIEDLGS
ASENARAGHFTLEQCLKLFTKPEVLAPEEAWYCPKCKQHREASKQLMLWRLPNVLIIQLK
RFSFRNFIWRDKINDMVDFPVRNLDLSKFCIGQKDDSQPPIYDLYAVINHYGGMIGGHYT
AYARLPSDKNSQRSDVGWRLFDDSTVTTVEESQVVTRYAYVLFYRRRNSPVERPIRRHSP
HGTESPSMAAGAAASQASLIWQELEEDEDADVIQQHMYKRFWTRTERLTPKDTPELVLSS
LPDAEENCVRFIVLGTIAAVVALFVNVLYPLMSHGHWK
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagtaccgacacaggtggtcgcaggagaccagtgtcctgcaaactggaggac
aactccaacaaaaagaagcagaaggataaggcaaaccaggaaagcaaagaggcaaagcaa
gaaacaaacagagatccaaagaaagacccttttattggctggaaacaaaatgcaagtgag
attattgtgaaattacgaccaggggaaaggtgtgtcaaagtggaggatgtaaatacatca
tttacagaccaatcctgtctggtcaagtttgcagatggttgccagtggagctgccaccta
aatgaagacattgagagttcatgcagcaaggttcaatataaagagaaagggaatattcta
caattggtgatgcaaaagaagatcccctttcacacttggccgtttttgatgaagaagagt
aaagaaagtgatccagtcttattaggctcagatgaagcaatcaatgcttccaagcttgaa
catttgttatcagaagagaattctgctgaacagcctgaaatggaatcaaaaaagggcaag
gtagaccggggaagcaaacgtacaataaagcaaaagccagctggcaaaagtgaaactggg
tcaaaagtcttaacattaaagacacctggaagcacagagttacaagttgagcctagtggt
aaacgtgtgatttgtccaaaggatcaggactgtaattcccggagagagcctttgactgaa
aatgtagagagtactaaaactaaagacatttcagatgcactaaaccaaagtggaaagact
aaagtcaagatcgaaagtactgaaaactctgaggccaagcaggagaaggataccagtaaa
agtacaaccacaataaagcataagacagaattaatcaatgaggtaaaagagcgtccagta
ccttccagtcatgacgcaagtcttcaaggtgcatcttcagatgcgattccccctccaaga
tctgatgtctttacaactcgggacaccagcctgcctcttccagttgatatagatatggtt
gctttcaatagtgtgagaaggcaagtagttaaagatttgaacttcaagaacagttgtttg
gaagaggaatgtattaaaaatacaaatttagtggcaaaagacactcttccaaatgtgctg
tcgaaagacctacttgcccatcttgaaaatgaacctgaaaaaggagataaggcaaaggag
gacaaaatgaatgacttatctgaagtagtttcttcctcctgtcaaacattggctctagaa
ccaatggtaaacttgacttttgtgaagaatgatttttacgaaaagggaaatgatgttatg
gtggtaagcatatacttaaaagaaatatgcagggaaacagcggaagtcttcttcagagag
caggatttcactctgatttttcagaccagtgatccaaattttttacgcttgcacccggat
tgtggaccagataccaagtttaaatggcaggtaaagctaaggaatcttattaatccagac
aaatgtactcattccttcactccatctcgacttgatatctttttaaagaagcgacatagc
cagaggtggggaggtctggaggcacctactggacaaggtgcagtgggtggtgcaaaggtt
gctgtgcctactgggccagcttcacttgaaaaaagctcaccaggaagtagtcagcacacc
ttgcctagcaaagaggaaccaagaactggtgagaaagagaagactcgagcagaagaaggt
agtcttgattctgtaagtgctaggactttaacagaacatgttcccctgaaacaggagcct
gcgcttgtaacatcgcagcttaaaccgacatgcatggtacagcccatgactcatgctcca
gcaaataatgattgtatggatgatgaagaagaaaagaaagtgtgccttcctgggttcact
ggactagtgaatctgggaaacacatgctttatgaacagtgttattcagtccctgtcaaac
acaagagaactgcgagattacttccatgatcgagcatttgagtctgaaattaactgcagt
aaccccctgggaactggtggccggctggctattgggtttgcagttctgctgcgtgctctc
tggaaaggaacacatcatgcattccagccatctaaactcaaagctatagtggcaagcaag
gccagtcagttcacaggatatgcacagcatgatgcccaggagttcatggcttttttgtta
gacggtcttcatgaggacttaaacagaatacagagcaaaccatacacagaaacggtggat
tctgatgggagacctgatgaggtagtggcagaagaagcttggaggaggcacaagatgaga
aatgattccttcattgtggacctgtttcaaggtcaatacaaatctaaactagtttgtcct
atctgtgcaaaggtgtctataacttttgacccattcctttatctgcctgttcctttgcct
cagaaacagaaggtacttactgtattctttttttggaaggacccacacaagaagcctgtt
aagtttcttgtgagtgtcagcaaagaaaactcttgtacaactgatattcttgagtccatc
tccagaagtgtaaaggttaaacctgaaaacctgagactgacagaggctagtgaaagtcga
tttcaccgtgtattccttccatcaaactctctggatgctgtctcccctacggacactctg
ttctgttttgaggtacagtctaaggagcttgccaaagaaaaagtagttatccttcaagtg
cagcagagaactcaagttccgaattgtcccatcaataagtgtgcagcttgtcagaagatt
ccgcattctgaagatgagaagattaagaggtgcactcgttgctaccgagttggttactgc
aaccagaattgtcagaagaatcattggcaggatcacaaaaatcattgtagaccaaacact
gaaagtattggattcccattcctaatcagtgtcccagaatctcgactgacttattcccga
cttgcacaactgctagaaggatactccagatactctgtaaatgtgtttcaaccccctttc
cagtctggcagaatgtcccctgagatgagccagtgtagaatggagcagcctcggttacat
gcagtggtttcagaaagccataataaggaaagctacttgccaacagatgagattaatgaa
agaggaaaatttaattgtgtagattccaatattgatagcatggcagcaggagattgtaag
aagaatgccatttctgtttctactctcactttggattcgggctactctgattctatttca
gaattacaggaccacttggagcatgaaaaagaaattacttgtgagaaaactttaaaacca
gaagctgttgtcacaggttatcagcaacccacagatattggtgctaatggtgcatcacag
ttctacatttgtctaattgatgcatcaaataaagaacaaaagcttgaggacaaaggagac
aaagcgttagacattcctgaaggctcttctgttatcttggtgtggaagaacaatgagcgt
caaaaggaatatgtcttggtcaaaccaaaggagctggagtatatagaagatctaggttca
gccagtgagaatgcccgggcaggtcacttcactcttgaacaatgtctcaagctgtttaca
aaaccagaggtgctggcacctgaagaagcttggtattgtcccaagtgtaaacagcacaga
gaagcatcaaaacagctgatgttatggagactccccaatgtcttaataatccaacttaag
cgtttctccttccgcaatttcatttggcgagacaaaattaatgatatggttgattttcca
gtcagaaatctggatctaagtaaattctgcattggccagaaagatgactctcagcctccc
atttatgatttatatgcagtgatcaatcattatggtggtatgattgggggacattatact
gcatatgctcgccttcccagtgacaaaaacagtcagcgtagtgatgttggatggcgtctc
ttcgatgacagcactgtcactacagtggaggaaagccaggtagtgacacgttatgcttac
gtgcttttttaccgacgacgtaactctcctgtggagagacctattcggcgacacagccct
catggcactgaatcaccatcaatggcagctggagctgcagctagtcaggcttctctgata
tggcaggaactggaggaagatgaagatgcagatgtcatccagcagcacatgtacaagagg
ttttggacaagaaccgagaggctgacacctaaagatacaccggaacttgtgctcagcagc
cttcctgatgctgaagaaaactgtgttcgatttattgttcttggtaccattgcagcagtg
gtagccttgtttgttaatgttctttacccattgatgtctcacggtcactggaaataa
DBGET
integrated database retrieval system
