Polypterus senegalus (gray bichir): 120540410
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Entry
120540410 CDS
T08668
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120540410 (jmjd1cb)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120540410 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
C1_2
Motif
Other DBs
NCBI-GeneID:
120540410
NCBI-ProteinID:
XP_039627078
LinkDB
All DBs
Position
1:244384227..244738572
Genome browser
AA seq
2563 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGEEPLELGEIGRWGWRAGVIRAVSHRDYDNPELAVYVEFDDL
EWDKREWVKVYEDFQCFLLEHQLVWAKHREINHPQGTKTKQIQWPALTFKPVVGKTVLGS
IIAVEFFADRQLDFLTEDDIHQPYQDEVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQ
GPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFLD
DVVYSLLKGENIGITSRRRSRSSQNNNTAHGHYTRAQANSPRPAMNSPGTTTKQGQQPQQ
QQQIQQPPQLLLQQQLQQQQQQQQQQQQQQQQQQRSSRTNKRKGSDSSVPDEERSKEDKL
ERGDFPKHRNKQVVNKRRKNEDDEKKATLKRLKAESISDYSENSDCENSAKIVTDSSFEQ
NLEIEIKSKSISQPSEDESHISKRADEQVLTGRQSPWDTTKEETTQKSEIHMSVDSELQE
EKSPPQPTEPPTHYDQHASMPDVQGCIVEIKNTTESLPKDHYANSPSQTPTSKCVIDITK
ENSSSNESRETSEAVSLVHTSKKSDVYLSESRHLVVNPLVSDLRKPDIKQQLNNNISSKI
EFVHSEVIRPVAAVSDSSAVAESKALYSSVMSCTNRANFVEEGRNLNKLSPTSDALKRKS
ENSLEVGRSKSNASQDIVQSKQNFTDTSSLKHNGSPEIYKQKSRYQDTPSVTNRSALKTE
TDIPKSSFKPVASRINQVETTKSPLIIDKNEHFTVYRDPALVRPETEANHITYMAQHIHP
HHASSHATCLTANSHHASHLLSGSTPQASMAAINAHALTGAPHHSVHHPHILPTVLPGMP
TGSLLGGHPRLESTHASGLSHLALAHHHQHQPQQFLQQQSPHILGQTHASYNQLGLYPII
WQYPNGTHSFPGLSLPSSKWVHPENTVTSEAGIRRNTSSPWLHQHTPVTSSDNLGLLSHI
PVRPSSAEPHRPVKLNTHSSPPVDHHKQEHDKKTFIEPMRSATPAHLKPDQENNRSQSGK
ESHLHRHFLDTISGHCKQQLQETGDRMNKYKEENRKILQESIEVAPFTAKMKSNEGEKDT
YNRLPNRSSPKSHIVKQNKEAERSSSELFKFKHSVPQTLPQSNYFTTLSNSVVNEPPRLY
PSKETLNSYVEKLSSSSSATANPLAVTSFNSKSLSKPPPLIKHQPEGEGLVGKMTEQLSQ
QMVSHSLNASGNERRSPAISPSNPLRCMPALHRAPVFHPPTQQTLDRKEGSYGRLSPPTL
TPIQPVSIAGKTFELQKPPTLLPELRDAVSKSSTVMTSSDIQKAGDALSHEKAGWHLGKS
SGKPQAATASVIVRPPTCIKYDDLPRPKAVCKDLAVEGSFTGTNLTDCLKVTTGPESGRV
IFQSTSIEETCARYKKNFQAISQGTVSSTVVAAANSICSTKTEVTTSVTPVTSILSLRES
EKTGCVSLTVSGSPEIESSLQLSGMQPTADIQENKIQSISPCSFQQVSTGSTALVTSGLT
YTGNFVHLKKHKAALAAAHSKNSNSNESSNIKIHNCSVVIAQDSSGISNPGNKTDCLTNG
QPVTSSQTNYHTKLKKAWLTRHSEEDKNTNKTEKLGSSVSEIIKPCTVSLIASTSSDVEN
REFKGQEDKLAQDERKTRRRTKRPYESGSETDDSDESESKSEQRAKRQPKPTYKKKQNDM
QKKKGDSEREEEDVKPNGIFRSAREKTKLKLASSNGIPRSVLKDWRKVKKLKQTGESFLQ
DDSCSEIGPNLQKCRECRIVRSKKGEETAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPD
QYDDEAINLWAPGDYEDNDLDLDTSKYILDYIGDKFCQLVMSENTAITWIKKDAKIAWKR
AVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSKDKELYAWMKCVKGQPH
DHKHLMPTQIIPGNVLTDLVEAMHSLKEKYGIKCHCPCASKQNFQVGKLPATNGVSQVLK
NVLNHSNKITKNEFQLQNSLQKIETNGDSSPGSDTDSKLSHPESQSPLHFLADLAEQKAR
EEKKENKESPENKYIKEERELTNSLDSLSCKSSSLVSHNNEQGSTLRDLLTTTAGKLRLG
STDAGIAFAPVYPSGTQIGKSGRSMPNILDDIIASVVENKIPANKTAKLNLKQEPSEETK
HERKRFSKDESNGLYSEIPHSWLCDKRLLWLKDHRNSYNWKLFRECWRQGQPILVSGIHK
KLNSNLWKADSFNQEFADHQGDLVNCKDGVACNSGIKEFWDGFEDLTKRPKAKDGEAIAY
RLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPDGKLNLASRLPSFFVRPDLGPRLCCA
YGVAASKEHDFGTASLHLEVSDILNILVYVGVAKGNGVLSKTGVLKILEEEDLDENMKKR
LKDSSETPGALWHIYVNKDADKIKEFILKVAKEQGIEIPHENDPVRDQNWYLTRKLRQRL
LEEHGVRGWTIVQFLGDCILVPAGALHQVQNLHSCVQVINDFVSPEHVVHSFHLTQELRS
CKEEINYEDKLQVKNIFYHSVKDAVGTLKRCCEEQVDEVQETS
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaagcgcggccggagctcgtcgggaagcggttcctgtgtgtcagtggagag
gagccgctggagctcggggagatcgggcgctggggatggagagccggtgtcattcgagct
gtcagtcaccgagattacgacaatccagagctggcggtatatgttgaatttgatgacctt
gaatgggacaagcgtgagtgggtgaaagtatatgaagatttccagtgttttttattagag
caccagcttgtatgggcaaaacatagagagatcaaccatcctcagggaacaaaaaccaag
caaattcagtggcctgctttgacgtttaaacctgtagtgggaaagactgtgctgggctcc
atcattgcagtagaattctttgcggatagacagcttgatttcttgactgaagatgatatt
catcagccatatcaggatgaagtagatagcttgaatccagttctcagggacaatccacag
cttcatgaagaggttaaagcctgggttaaagaacaaaaagttcaagaaatttttatgcaa
ggtccctattctttaaatggctaccgtgtcagagtatatcgacaagactcagctactcag
tggtttactggtatcatcactcatcacgatctcttcacccgcactatgattgtgatgaat
gaccaggtactagaaccacagaatgttgatccttctatggtacagatgacatttctggat
gatgttgtttactctttgctgaaaggtgaaaatatcggcatcacttcaaggcgaagatca
cgctctagtcagaacaacaatactgcacatggtcattatacacgtgcccaagcaaatagt
ccaagaccagcaatgaattccccagggacaactacaaaacagggacagcaaccacagcaa
caacagcagattcaacagccaccacagctgctgctgcagcagcagctgcaacagcagcag
cagcagcagcagcagcagcaacaacaacaacaacaacaacagcgaagttcccgcaccaat
aaacgtaaaggatctgatagtagtgtaccagatgaggagagatcaaaagaggataaactt
gaaagaggagattttccaaaacacagaaacaaacaagttgtaaacaaaagaagaaagaat
gaagacgatgaaaagaaagctactttaaaaagactgaaggcagagagtatctcagattac
tctgagaacagtgactgtgaaaactctgccaaaatagtgacagattcttcttttgagcaa
aatttagaaattgagataaaatccaagagtatttcacaacctagtgaagatgagtctcat
attagcaaaagagcagatgaacaggttttaacaggcagacagtctccttgggatacaacg
aaagaagaaacaactcaaaaatctgaaatacacatgtcagttgacagtgagttgcaggag
gaaaaatctccacctcagccaacagagcctcctactcactacgatcagcacgccagtatg
ccagatgtccagggatgcattgtagaaataaaaaacactacggagtctttacccaaggat
cattatgccaacagtccatcacagactcctacatcaaaatgtgtcattgatattactaag
gaaaacagttcaagtaatgaatctcgggaaacttctgaggcagtttctcttgtgcacaca
tccaagaaatcagatgtgtatttatcagaatcaagacatttagttgtaaatcctttagtt
tctgatttgaggaaaccagatatcaaacagcaattaaacaataatatttctagtaaaatt
gaatttgttcattcagaggttattagaccggttgctgcagttagtgattcatctgctgta
gctgaaagtaaagctctgtactcttcagttatgtcttgtacaaacagagccaactttgta
gaagagggtaggaatttaaataaattgagtcccacatccgatgctttaaaacggaagtca
gagaattctcttgaagtaggaaggtctaaatctaatgcatctcaagatatagtgcagtca
aaacagaactttactgatacatctagtttaaaacataatggatcacctgagatttataaa
caaaaatctaggtaccaagataccccatctgttacaaacagatcagcattgaaaactgag
actgatattcccaagtcaagctttaaaccagttgcatctagaataaaccaggtggaaaca
actaaaagtccccttataatagacaaaaatgaacacttcactgtttacagggatcctgca
cttgttaggcctgaaacagaggctaaccatattacatatatggctcagcatattcatcca
caccatgcatcctcacatgcaacatgtttaactgccaatagtcatcatgcttcacatctt
ctttcaggatctacgcctcaagcctcaatggctgctattaatgcacacgcccttactggt
gctccacaccattctgttcatcaccctcatattcttccaactgtactccctggaatgccc
acaggttctttattgggtggacaccctcgcctggaatccactcatgctagtggcttaagc
catttagctttagctcatcatcatcagcatcagccgcaacagtttttacaacaacagtca
cctcatatcttgggacagactcatgcttcttacaatcagcttggtctctacccaatcatt
tggcagtatccaaatggaactcattccttcccaggtcttagtttgccttcctccaagtgg
gtccatccagaaaacacagtcacctcagaagctggcattagaaggaatacctccagccct
tggcttcatcaacacacgcctgtgacctcatctgacaatctaggtttgttaagccatatt
cctgtcagaccttctagtgctgagccacaccggccagtcaagctgaatacacactcaagt
ccacctgtagaccatcacaaacaggaacacgataagaaaacgtttattgagccaatgcga
tctgcaactccagcacatttgaaacccgatcaggagaacaacagaagtcagtcaggcaag
gaaagccatctgcacagacacttcttggatacaatttcaggtcactgcaaacagcaactt
caagaaacaggggacagaatgaataaatacaaagaggaaaaccgcaaaattcttcaggaa
agcattgaagtagccccttttacagctaaaatgaaatcaaatgaaggggaaaaagatact
tataatcgattacccaacaggtccagtcccaaaagtcatattgtgaagcaaaataaagag
gctgaacggtcttcatctgaactttttaaatttaaacattcagtgccacagactttgcca
caaagtaattatttcactaccctttcaaacagtgtagtgaatgagccaccacgattatat
ccatccaaggaaactttaaattcttacgttgagaagttaagcagcagctcttcagcaaca
gctaatcctctagctgttacttcatttaacagtaagtctctttcaaaaccgcctcccttg
attaaacatcagccagaaggagaggggttagtgggaaaaatgactgaacagctttctcag
caaatggtctcacattctcttaatgcgtctggaaatgaacgaagaagtcctgccatctca
ccatcaaatcctcttcgatgtatgccagctttgcacagagctccagtctttcacccccca
acacagcagactctggatcgaaaggagggcagttatggtagactttctccaccaacccta
acaccaatccaaccagtgagtatagctggaaaaacctttgaattgcagaaacctccaaca
ttgttaccagagctccgggacgcggtttctaaaagcagtactgtaatgacttcatcagac
attcaaaaagctggagatgctctaagccatgagaaagctggatggcatttaggaaaaagt
agtggaaagccacaggctgcaacagcatctgtgattgtccgaccgcctacatgcattaaa
tatgatgacttgccaagaccaaaggctgtttgtaaagatcttgctgttgaaggatcattt
acaggaacaaatctgacagactgcctgaaagtaacaacaggcccagaatctgggagagta
atttttcagagtacaagcatagaggaaacttgtgctaggtacaaaaagaattttcaagca
atatcccagggaactgtttccagtactgttgtagcagctgcaaatagcatatgcagtacc
aaaactgaagtgaccacttctgtcaccccagttactagtattttaagtttaagagagtct
gaaaagacaggctgtgtatcattgactgtttctggtagtcctgaaatagaaagttcttta
cagttaagtggaatgcagcccacagcagatatacaggaaaataaaattcaaagtatatct
ccgtgttcttttcaacaagttagtacaggaagcactgcactggtgacttcggggcttaca
tatacaggaaattttgtccatttaaaaaaacacaaagctgcactggctgcagctcattca
aaaaattcgaattcaaatgaatctagtaatattaaaattcataattgttctgtagtaatt
gcacaagacagtagtggaataagcaacccaggaaataaaacagattgtttaactaatggg
caacctgtcacttcaagccagactaactaccacacaaaacttaaaaaagcctggcttaca
agacattcagaagaagataaaaacactaataaaacagagaagctggggagctctgtgtca
gagattataaagccatgcactgttagcttaattgcatcaacatcaagtgatgtggaaaat
agggaattcaaaggacaagaagacaagcttgctcaagatgagaggaaaacaagaagaaga
accaaacggccttatgagtcaggctcagagacagatgactcagatgaaagtgaaagcaaa
tcggagcaaagggcaaaacgacagcccaagcctacatacaaaaagaagcaaaatgatatg
caaaagaaaaagggtgacagtgaaagggaagaggaggacgttaagccaaatggtattttc
agaagtgcaagagagaaaacaaagctgaagttggcaagcagcaatggtatacctcggtca
gtattaaaagactggcgtaaagtgaagaagctgaaacagactggagagtctttcctgcag
gatgattcttgctcggaaattggacctaaccttcaaaagtgtagagaatgcagaattgtc
cgcagtaagaaaggagaagaaactgctcactcccctgttttctgcaggttctattatttt
cgccgcctttcatttagcaagaatggagtagtcaggatagatggcttttcttctccagac
cagtatgatgatgaagcaattaatctttgggcaccaggtgattatgaagacaatgatctt
gacttggacacttccaaatacatattggactacattggagataaattttgtcaactagtt
atgtctgaaaatacagctatcacatggattaaaaaagatgccaaaatagcctggaaaaga
gctgtaaggggagtacgggagatgtgtgatgcatgtgaagcaacactgtttaacattcat
tgggtctgccaaaaatgtggatttgtggtctgtttggattgttacaaagcaaaagaaaga
aaaagctccaaagacaaagaactctacgcttggatgaagtgtgtcaaaggacagcctcat
gaccataagcacttgatgccaacacagattattccaggaaatgttttaacagatctggtg
gaagcgatgcattccttaaaagagaagtatggaattaaatgtcattgcccatgtgccagt
aaacaaaactttcaagttggcaaactccctgccacaaatggagtttcacaggttttgaaa
aatgttcttaatcacagcaataaaataacaaaaaatgaatttcagcttcagaattcattg
caaaaaatagaaaccaatggcgacagtagtccaggaagtgacaccgatagcaagctatct
catcctgaatcccagtctcctttgcatttcctagcagatttagctgagcagaaagccagg
gaagaaaagaaagaaaataaagaatctccagaaaacaagtatatcaaggaggaaagggaa
ttaacaaacagtttagactctttgagctgtaaatcatcatcattggtgtcgcacaacaat
gagcaaggatctactctcagagatttgctgactacaacagctggtaaattgcgccttggc
tctacagatgctggaattgcatttgctcctgtttatccttcagggacacaaattggcaaa
agtggaagaagcatgcctaatatcttagatgacattattgcttcagtagttgaaaataaa
attcctgccaataaaactgcaaaactcaatcttaaacaagaacctagtgaagaaacaaaa
catgaaaggaaaagattcagcaaagatgaatcaaatggattatattctgagataccacat
tcctggctctgcgataaacgtttgctttggcttaaggaccacagaaattcctataactgg
aaactctttagggaatgctggagacaagggcagcctatactagtatcaggaatacacaag
aagcttaacagcaatttatggaaagcagattcatttaaccaggaatttgctgaccatcag
ggcgatcttgtgaattgtaaagatggtgtggcttgtaattctggaatcaaagaattctgg
gatggatttgaagatctaactaaacgtcccaaggcaaaggatggagaggcaatagcttat
cgactgaaggactggccttctggggaagagtttatggctcttatgccttccagatatgat
gacttgatgaagaatctacccttaccagagtattccgatccagatggaaagcttaatttg
gcttctcgcttgccaagtttttttgtacgaccagatcttggaccaagactttgctgtgct
tatggagtagctgcatccaaagaacatgactttggaactgccagccttcatttagaagtt
tctgatattttgaatatacttgtttatgttggtgtagccaaagggaatggagtactttct
aaaacaggagtattaaaaatattagaagaggaagatttggatgaaaatatgaagaagaga
ctaaaggattctagcgagactccaggggcattgtggcacatatatgtaaacaaagatgct
gataaaattaaagaatttattctaaaggtggcaaaggaacaagggattgaaatccctcat
gaaaatgatccagtccgagaccaaaactggtatttaactcgaaagctaagacaacgctta
ttagaagagcatggtgttcgtggctggaccatagtgcagttccttggagactgtattcta
gttcctgcaggagcacttcaccaggtgcagaatcttcacagttgtgtgcaagtcataaat
gactttgtatctccagaacatgtggttcactcatttcatttaacacaggaactgcggtcc
tgtaaggaagaaatcaactacgaagacaagctacaggtcaaaaacatattttatcattct
gtgaaagatgctgtaggaacattaaaacggtgctgtgaagaacaagtagacgaggtgcaa
gagacctcatga
DBGET
integrated database retrieval system
