Polypterus senegalus (gray bichir): 120540571
Help
Entry
120540571 CDS
T08668
Symbol
znrf3
Name
(RefSeq) E3 ubiquitin-protein ligase znrf3 isoform X1
KO
K16273
E3 ubiquitin-protein ligase ZNRF3 [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120540571 (znrf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120540571 (znrf3)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120540571 (znrf3)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120540571 (znrf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120540571
NCBI-ProteinID:
XP_039627348
LinkDB
All DBs
Position
12:53984927..54121799
Genome browser
AA seq
866 aa
AA seq
DB search
MMVSAARRRGAQSLLALLLLAAAAAALAKDTAFVEVVLFESSPSGDYTTYTTGLQGRFSR
AGATISAEGEIVQMHPLGLCNSNDEEDLYEYGWVGVVKLEQPELDPSCLTVLGKAKRAVQ
RGATAVIFDVSENPDAIDQLNQGSEDPLKRPVVYVKGADAVKLMNIVNKQKVARARIQHR
PPRQPTEYFDMGIFLAFFVVVSLVCLVLLIKIKLKQRRSQSSLNRMAVQALEKMETRKFK
SKNKGYREGGPAPSDTLSSSSTSDCAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHH
TCPHCRHNIIEQKKGTTGPICMETGNASLGRQQRVVLPVHYPGRVHRASQMTAYPTRTSM
DPHGNPITVLTVDQHGDRNLYPPQSAAFVRSYPPIHLDHSLNPHHCGLEHRAAYALPPNF
RRPKINGRNFSRAACFSQYETMYQHYFFQGLSYPQPEGQANIGPHKGQARAFQQGLLFPT
VVHMAPTASSRHGESGSSSSFSCYHGHRSVCSGYLADCPGSDSSSSSSGQCHCSSSDSML
DCTEVSNQGVYGSCSTFRSSLSSDYDPYIYRSRSPCRGATLEPGTSCPPVSQDDSAAAPS
HECHRPPPRASVFSGDQLSSCSLEPNYSSHSSLEPRETSTTTSDGALEGATPDLASWEKG
AEVSEQGAACSCCFEIPPTAALDGRGAEVGGTLLVGAAHCGRGLEPRTSLGTGPQYLYSV
NMDHLCRTEPGNSEGLPCCFYEERNVPRSSGNFYSEDYAVSVQYMQTDTDVPALQDQRIP
IIPEDLDCEPGAPAVGSLLSAQDGHSELFVPAGPFRGRLHPLQEGARALFHGNGPCFHEA
MGNGNKAGSAGPPHLADKDCTADQSL
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgtctgcggcgcggaggcgaggggcgcagtcgctgttggcgctgctgctactg
gcggccgccgccgcggctctagctaaggataccgccttcgtggaagtggtcctgttcgag
tccagccccagcggggattacactacgtacaccaccgggctgcaggggcgcttctcccga
gcaggggccaccatcagcgcagaaggagagattgtgcagatgcaccctttgggactctgt
aacagcaatgatgaagaggacctttatgagtatggctgggtgggagttgtcaaattggag
cagcctgagctagacccaagttgtctaactgttctgggaaaggctaaacgggcagttcag
agaggagccacagcagtcatctttgatgtctctgagaacccggatgctatagaccagctg
aaccagggatccgaagacccactcaagaggccagtagtctatgtaaagggggcagatgcc
gttaagctgatgaatatcgtcaacaagcaaaaggtagcccgagctaggattcagcaccgg
cctccacggcaacccacagagtattttgacatggggattttcctggcattttttgtggtg
gtgtccctggtgtgccttgtacttctcatcaagataaaactgaagcagcggaggagccag
agttccttgaacagaatggcagtccaggctcttgagaagatggaaacaagaaagtttaaa
tccaagaataaaggctacagagagggtggtcctgcaccttcggataccctgagcagcagc
tcaacgtctgactgtgctatctgcctggagaagtacattgatggggaggaactccgtgtg
atcccgtgtgctcatcgcttccataagaaatgcgtggatccatggttgctgcagcatcac
acgtgtccacactgcagacacaatatcattgagcaaaagaaagggaccactgggcccatc
tgcatggagacaggtaatgcttctcttggccgacagcagcgcgttgtgcttcctgttcat
tacccaggacgtgtgcaccgagccagccagatgactgcctacccaacccgtacaagcatg
gatcctcatggcaatcccattacagttctgactgtggaccagcatggagatcggaatctc
tacccacctcaatctgctgcctttgttaggagttacccccccatccacctagaccactct
ttgaatcctcaccactgtggcctggagcacagggctgcttatgccttgccacctaacttc
agacggcccaagattaatggacgcaacttttccagggcggcatgcttctcccaatacgag
acaatgtaccagcattatttcttccaaggcttgagctacccgcagccagagggccaggcc
aacattggacctcacaaaggtcaagctcgagcttttcagcaaggcctcctcttcccaaca
gtggtgcacatggcacctactgcttcctctcgccatggggagagtggaagttcttccagc
ttcagctgctaccatggccaccggtcagtttgtagtggctacctggcagactgtcctggc
agtgacagcagcagcagtagttctggtcagtgccactgttcctccagtgactctatgttg
gactgcacagaggtgagcaatcaaggagtatatgggagttgttccactttccgtagctct
ctgagcagtgactatgacccttacatctaccggagccggagcccttgccggggggcaaca
ctggagcctggaactagctgtccacctgtatcccaggatgactctgctgcagcacccagt
catgagtgccaccggcccccacccagggcctctgtcttctcaggggaccagctgtctagc
tgtagcctggaacccaactacagcagtcattcttcattagaacccagggaaactagtacc
actacctcagacggagccctggaaggggctacaccagaccttgcaagctgggagaagggg
gcagaggtgagtgagcagggagcagcctgtagctgctgctttgaaatccctcccactgct
gccttggatggccgaggagctgaggtgggcggcactctgctagtgggagctgcccactgt
ggtcggggcctggagccaaggacctctttaggcactggccctcagtacttgtacagtgtt
aacatggaccacttgtgccggacagagccagggaattctgaaggtctgccctgctgcttc
tatgaggagagaaatgtcccacgaagcagtgggaatttttactcggaggactacgccgtc
agtgtgcagtacatgcagacggacacagacgtgcctgctctgcaggaccagagaatcccc
atcatcccggaagacttagactgtgagccaggagcaccggcagttggaagcttgctttcg
gcacaagatgggcatagtgaactttttgtcccagctgggccattccggggccgcctgcat
ccccttcaagaaggagctagggccttgtttcatggaaatggcccctgttttcatgaagcg
atgggaaacggcaacaaggcagggtcagcaggaccacctcacttggcggacaaagactgc
acagctgaccagagcctctga
DBGET
integrated database retrieval system
