Polypterus senegalus (gray bichir): 120540628
Help
Entry
120540628 CDS
T08668
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120540628 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120540628 (mbd4)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120540628 (mbd4)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
120540628 (mbd4)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120540628 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
120540628
NCBI-ProteinID:
XP_039627488
LinkDB
All DBs
Position
12:44462555..44481784
Genome browser
AA seq
510 aa
AA seq
DB search
MEELQGSYGLLMQEEVKSEEASSCQNCNKGSIEEMNRVPPGWVKVIHQRLTGKTAGKYDV
FMISPQGKKFRSKAALKEYLQSTDDCNLTIADFDFCVPKSNALKPTRKWIKVSKNDTDTQ
ISADATCKEEGLPQAASLMHESKEPCHTISLTQSKVNEHLELCCEPGNNIGPISETQPSN
CGSDQKNLLKMKNGCGTMSLKSKLVQNNIVSASPGKRIKESIQSTKFEGKRRNSSRDSEK
GNTKKCKVKDLSVRQLKNKVQQRILRSDKKSDMNIRQESNSISSSTEEKPVDHPHVDDGR
HDSLDVDAVIENGSDVLSSQDGNDAALRQSQGEFSMKMYVDKRKRSPYFSRKFSEEGLSP
PRRNIFKKWTPPRSPFSLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWQFLERYPSPE
VARRADWKEIAELLKPLGLNELRAKTIVKFSDEYLAKNWKYPIELHGIGKYGNDSYRIFC
VNEWKRVTPQDHKLNKYHAWLLENHEELGI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgcagggctcatatggccttttaatgcaggaagaagtaaaaagtgaagag
gccagttcttgtcagaactgtaacaagggttctattgaagaaatgaacagggtccctccg
ggatgggttaaagtgattcatcagaggcttacagggaaaacagctggaaaatatgatgtt
tttatgatcagtccgcagggaaagaaattccgatccaaagcagcacttaaggaatatctg
cagagcacggacgactgtaatcttacaattgcagattttgatttctgtgtcccaaagtct
aatgctttaaagcctacaaggaaatggatcaaagtttcaaaaaatgacactgacactcaa
atcagtgctgatgccacatgtaaagaggaaggccttccccaagcagcatctctaatgcat
gaatcaaaggagccatgccacaccatatctcttacacagtccaaagtgaatgaacattta
gaactgtgttgtgagcccggaaataatattggacctataagtgaaacacagcctagcaac
tgtggttcagatcaaaaaaaccttctgaaaatgaagaatggatgtggaactatgtctttg
aaaagtaagctggtacagaataatattgtttcagccagtcctggaaagagaataaaagaa
agcattcagtctacaaaatttgaaggtaaaaggagaaattcatccagggattctgaaaaa
ggaaacacaaagaagtgtaaagtaaaagatttgagtgtaaggcagttgaagaataaagtt
cagcaaaggattctaagaagtgataaaaaatcagacatgaacatcagacaggaaagtaac
tccatctcctcttctaccgaggaaaagcctgtggatcatccccatgttgatgacggcaga
cacgattctcttgatgtagacgctgtgattgaaaatggcagtgacgtattgtcttctcag
gatgggaatgatgcagcattgaggcaaagccaaggagagttcagtatgaaaatgtatgta
gacaaaagaaaaagaagtccttatttttcaaggaaattttctgaagaaggtttaagccca
cccagacgtaacattttcaagaaatggacaccgcctcgatctcctttttctttggtacag
gaaaccctatttcatgatccttggaaactgctcattgcaacaattttcttaaacagaact
agtggaaagatggcaatccctgtgctttggcaatttttggaacgctatccatcaccagaa
gtggctcgcagggctgactggaaagagatagcagaactgttaaagccacttggattgaac
gagctaagagcaaagacaatagtgaaattttcagatgaatacttagctaaaaactggaaa
taccccatagaattgcatggtattggaaaatacggaaatgactcctacagaatattttgt
gtaaatgaatggaaacgggttacacctcaagatcataagttgaataaatatcatgcgtgg
ctgctggagaatcatgaagaacttggaatataa
DBGET
integrated database retrieval system
