Polypterus senegalus (gray bichir): 120540636
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Entry
120540636 CDS
T08668
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120540636 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120540636 (ppil2)
03110 Chaperones and folding catalysts [BR:
psex03110
]
120540636 (ppil2)
04121 Ubiquitin system [BR:
psex04121
]
120540636 (ppil2)
Enzymes [BR:
psex01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120540636 (ppil2)
Spliceosome [BR:
psex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120540636 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
120540636 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
120540636 (ppil2)
Chaperones and folding catalysts [BR:
psex03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120540636 (ppil2)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
U-box type E3
120540636 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
U-box
FOXO_KIX_bdg
Motif
Other DBs
NCBI-GeneID:
120540636
NCBI-ProteinID:
XP_039627499
LinkDB
All DBs
Position
12:complement(57868975..57939598)
Genome browser
AA seq
528 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTDYYGGKRAVIPQNNFRRLPFDHCSLSLQPFQYPMCTPEGVL
FDLLSIVPWVEKYGTNPITGEKLETKSLIKLNFSKNSEGKYHCPVLYSVFTNNSHIVAIK
NTGNVFSYEAVEQLNIKTKSYKDLLTDESFTRQDIITLQDPTNLDKFNVSDFFHVKNNLK
VLNPDEEKAKLDPSYHLKTTNLETQETLAELYKEYKGDELLASTMKVPEKKKTDKLNAAH
YSTGKVSASFTSTAIAPETTHEADSIEEDVVRYQYVKKKGYVRLHTNKGDLNLELHCNMV
PKTCENFIKLCKTAYYDGTVFHRSIRNFMIQGGDPTGTGTGGESCWGKPFKDEFKPNLSH
AGRGVLSMANSGPNSNKSQFFITFRSCTYLDRKHTVFGRVVGGFDTLTAMENVESDPKTD
RPKSEIKILNATVFVDPYEEADAEIAAEREKALKLEEEENAKVNAVLPKSKAEEMPKTYR
AGVGKYINMSQLKRANNGVDDEPSTSGAGPTTSKKLKGKTGFGDFSSW
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagacaacatcagaaagacaaaatgtacatcacctgctctgagtacacggat
tactatggcggcaagagagcagtgattcctcagaataacttcagacgtttaccctttgac
cattgcagtttatctctgcagccattccagtatccaatgtgcacgcctgaaggagttcta
tttgatctcctgagtattgttccttgggtagagaaatatgggactaacccaatcacaggc
gagaagcttgaaaccaaatcattaatcaaactcaatttcagcaagaacagtgagggaaaa
taccactgcccagtgctgtactctgtattcacaaataattcacacattgtggccattaag
aacactggaaatgtgttttcatacgaggcagtggagcagcttaatatcaagaccaaaagc
tacaaagatctgctcacagatgagtcatttactcgccaagacataatcacactacaggat
cctacaaatcttgacaagttcaatgtctcagatttttttcatgttaaaaacaatttgaag
gttttgaatccagatgaagaaaaagcaaagttggatccatcatatcacctgaaaacaaca
aaccttgagacccaagagacattagctgagctgtacaaggaatataaaggagatgaattg
ctggcctctaccatgaaagttccagagaagaagaaaactgataagctcaatgctgctcac
tactccactggcaaggtttctgcatcttttacttcgacagcaattgcacccgaaacaaca
catgaagcagattccattgaggaggatgttgtccgttaccagtatgtgaagaagaagggt
tacgtccggctacacactaacaaaggcgacctcaacctggagctacattgtaacatggtt
ccaaagacatgtgaaaacttcatcaagctttgcaaaacagcgtattatgacggcacagtt
tttcacaggtctattcgaaactttatgattcaaggtggtgacccaacaggaacaggaaca
ggtggggaatcctgttggggtaagcccttcaaagatgaattcaagcccaacttgtcacat
gcaggccgtggggtcctcagcatggcaaattctggaccaaacagtaataaatctcagttt
ttcattacatttcgttcctgcacttacctggatagaaaacacacagtcttcggaagagtt
gttggtggctttgataccctaactgcaatggaaaatgtagaaagtgaccccaagactgac
cgcccaaagtcagagattaagatactgaatgccacagtatttgtggacccgtatgaggag
gctgatgctgagattgcagcagaaagagaaaaggctctcaaactagaagaagaagaaaat
gcaaaggttaatgctgttctcccaaagagcaaggctgaagagatgccgaagacttaccgt
gcaggcgttgggaaatatattaatatgtcacaactaaaacgtgccaacaatggagtggat
gatgagccatcaacaagtggagcaggtcctacaacaagcaaaaaactgaaaggaaagaca
ggctttggcgatttcagttcctggtag
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