Polypterus senegalus (gray bichir): 120540653
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Entry
120540653 CDS
T08668
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120540653
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120540653
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
HIRA_B
WDR90_beta-prop_4th
NBCH_WD40
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
120540653
NCBI-ProteinID:
XP_039627521
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Position
12:complement(59070875..59101246)
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AA seq
1023 aa
AA seq
DB search
MKLLKPTWVSHNGKPIFSVDIHPEGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNENIP
RMLCQMDNHLACVNCVRWSNNGVYLASGGDDKLIMVWRRAAYIGPSTVFGSSSKLANVEQ
WRCATILRSHTGDVMDVAWSPHDAWLASCSVDNTIVIWNVRKFPEIIATLKGHTGLVKGL
TWDPVGKYIASQADDRSLKVWRTVDWQLETSITKPFDECGGTTHVLRLSWAPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSQKPSCPYCCC
AVGSKDRSVSVWLTCLKRPLVVIHELFDKSIMDITWTLNGLGILVCSMDGTVAYLDFSQD
ELGDPLNEEEKNLIHQKIYGKSLAITTETQMGTTIIENPEMLKYQQQKEVVEQTSTANRE
SSTPKLNSVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFNSVP
IMPGSSVSSQLTQHLTSSDSNTANSVSMKPQHEPLASASTAAPQKPLEDAQQRNGVNSGV
SNSVAVVNSTAVKANNLHSSSSKIEPMKALDSRFTERSKTTPGVAISSPVVSLTPVDRIK
DVGVVKESRPKEILESSSDSEDKTPIMKSLSLSKRKAEVEGAEVVEKRKKGRPRKDTKTM
SVSVAVQQNATGTDKDLSRIVSPVVTLKLPTQTLQKCFTLQISSDPSVFIEVENEVSTYA
GLKLSRLKCNREGRDWETVVTSRILAAAGSSDIVSVACEDRTLSVFSAYGRRLLPAILLQ
APVSTVHCTGFFVMVLTACATLSVWDVQKQAVLVKDESLQMILSGTDTTVTQSLLTQHGV
PVVNLSDGKSYCFNSSLGTWNIIADKQDSLALCADYRSCVISQDALMTSGPLAIVQGRTL
NAGRQAARLSSTPHHLQQGMTLAYLENQMASALSLKSSQEYRHWLLIYARFLVNEGSEYR
LRELCKDLLGPVHKSAGSMWETAILGLQKRELLKEVLPVIGQNLRFQRLFTECQDQLEML
KSK
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttgaagccgacttgggtcagtcacaatgggaagccaattttttccgttgac
atccatccagagggaacaaaatttgcaactggtggacaaggggaagattctgggaaggtt
gtcatctggaatatggcacccgtcctccgggaagaggatgagaaaaatgagaacattccc
agaatgctgtgtcagatggataaccacttagcttgtgtaaactgcgtccgctggtcaaac
aatggagtgtacttggcttcaggcggtgacgacaagctgatcatggtgtggaggcgagct
gcctacattggcccaagtacagtgtttggttcaagcagtaaactagccaacgtggagcaa
tggagatgtgcaaccatcctgagaagccacacaggagatgtgatggatgtagcctggtcc
cctcatgatgcctggttggcttcctgcagtgtggataatacaatcgtgatctggaatgtc
cgcaaattcccagagatcattgccactctaaagggtcacacaggcctagtgaaaggttta
acctgggacccagttggaaagtacattgcctcccaggctgatgaccgtagcttgaaggtg
tggagaactgtggactggcagttggaaacgagcatcaccaaaccctttgatgagtgcgga
ggaacaactcacgtgttgcgactcagttgggcccctgatggtcagtaccttgtttctgct
cacgctatgaacaattctggtcccactgcgcagattattgagagggatggctggaaaact
aacatggacttcgtgggtcataggaaagctgttactgttgtgaaattcaatcctaagatt
ttcaagaagaaacaaaaaaatggcagttcccagaagccaagttgcccatactgctgttgt
gctgtaggcagtaaagaccgttctgtatctgtttggctgacatgcctgaagcggcctctg
gtggttatccatgagctgtttgacaagtccattatggacataacatggaccttaaacggc
ctggggattttggtgtgctccatggatggcactgtagcatatctggatttctcacaggat
gagctcggagatccactcaatgaggaagaaaagaatttaattcatcaaaagatttatggg
aaaagcttggcaattacaacagaaactcagatgggcaccaccatcattgaaaatccagag
atgcttaagtaccagcagcagaaagaagtagtagagcaaacaagcactgcaaacagggag
tcctccacacctaaactcaacagtgtggtcaatggtgagagcctggaggacattcggaag
aatttgttaaagaagcaggttgaaacaaggacggcagatggtcggcgcagaatcacccct
ctctgcatcgctcagcttgacactggagatttctccccagccctgttcaacagcgttccc
atcatgccagggtcttcagtgtcctcgcagctgacgcagcacctgacctcctctgactcc
aacactgccaattctgtgagcatgaagccacagcacgagcccttggcgtctgcatctact
gctgctcctcaaaagccccttgaagatgcccagcagagaaatggggtcaactctggtgtg
tcaaattcagtggcggttgtcaattccactgcagtaaaagctaacaatctccactcatcg
tcttccaagattgagccaatgaaagcacttgattcaaggttcacggagaggtcaaagacg
acccctggggttgccatatcctctcctgttgtgagcctgactcctgttgacagaataaag
gatgtaggtgttgttaaagagtccaggccaaaagagatactggagagcagcagtgacagt
gaagacaagactccaataatgaagtctctgtcgttatccaagagaaaagctgaagttgaa
ggtgctgaggtggttgaaaagaggaaaaagggtagaccgcggaaagacaccaaaaccatg
tctgtctcagtggcagtgcaacagaatgctactgggacagacaaggacctttctcgaatt
gtttctccagtggtaacgttgaagcttcctacccagactcttcagaagtgtttcacattg
cagattagttcagatccatctgtgttcattgaagttgaaaatgaagtttctacttatgcg
ggtttgaaactgagtcgattaaaatgtaaccgagaaggcagagactgggagacggtagtt
acaagtcggatattggcagcagctggaagcagtgacattgtcagcgtggcttgtgaggac
cgaacactgtcagtgttttctgcatatggtcgccgtcttctgccagcaatcctcctacag
gcccctgtctctactgtccactgtactgggttcttcgtcatggtcctgacagcatgtgct
actctctctgtctgggatgttcagaagcaagctgttttggtgaaggatgagtccctgcag
atgatactgtcaggcacagacactactgtcactcagtccttgctgacacaacatggagta
ccagtggtcaacctctctgatggaaagtcttactgtttcaattcctcccttggaacctgg
aatatcatagcagacaagcaggactccttagcactgtgtgcagactacaggagctgtgtt
atttctcaagacgctttgatgacttctggtcctttagcaattgtacagggccggacgctc
aatgctggaagacaggcagcccggctgtcctcaactcctcatcatttacagcaagggatg
accctcgcttacctggagaaccagatggcatcagcacttagcttaaaatcgagccaggaa
taccgccactggcttctcatatatgccagatttctggtgaatgaaggatcagagtaccgg
ttgcgagaactttgtaaagacttgctagggcctgtgcacaaatcggcaggaagcatgtgg
gaaacggcgatactggggctgcagaaacgggagctgttgaaagaggtgctcccagtcatc
gggcagaaccttcggttccagaggctcttcacagaatgtcaggatcagctggagatgctg
aagagcaaatag
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