Polypterus senegalus (gray bichir): 120540659
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Entry
120540659 CDS
T08668
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin B/C
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03320
PPAR signaling pathway
psex04120
Ubiquitin mediated proteolysis
psex04137
Mitophagy - animal
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120540659 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120540659 (ubc)
04137 Mitophagy - animal
120540659 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120540659 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120540659 (ubc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120540659 (ubc)
Ubiquitin system [BR:
psex04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120540659 (ubc)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of breast milk
120540659 (ubc)
Exosomal proteins of other body fluids (saliva and urine)
120540659 (ubc)
Exosomal proteins of colorectal cancer cells
120540659 (ubc)
Exosomal proteins of bladder cancer cells
120540659 (ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
120540659
NCBI-ProteinID:
XP_039627526
LinkDB
All DBs
Position
12:59286790..59289316
Genome browser
AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccatcgagaacgtgaaggccaagatccaagacaaggaaggcattccccctgaccag
cagaggttgatctttgcaggcaaacagctggaagatggccgcaccctctctgactacaat
attcagaaagagtccaccctgcacttggtcttgcgtctcaggggtgggatgcagatcttt
gtgaagaccttgactggcaagaccatcacccttgaggttgagcccagtgacaccatcgag
aacgtgaaggccaagatccaagacaaggaaggcattccccctgaccagcagaggttgatc
tttgcaggcaaacagctggaagatggccgcaccctctctgactacaatatccagaaagaa
tccaccctgcacttggtcttgcgtctcaggggtgggatgcagatctttgtgaagaccctg
actggtaagaccatcacccttgaggttgagcccagtgacaccatcgagaacgtgaaggcc
aagatccaagacaaggaaggcattccccctgaccagcagaggttgatctttgcaggcaaa
cagctggaagatggccgcaccctctctgactacaatattcagaaagagtccaccctgcac
ttggtcttgcgtctcaggggtgggatgcagatctttgtgaagaccttgactggcaagacc
atcacccttgaggttgagcccagtgacaccatcgagaatgtgaaggccaagatccaagac
aaggaaggcattccccctgaccagcagaggttgatctttgcaggcaaacagctggaagat
ggccgcaccctctctgactacaatattcagaaagagtccaccctgcacttggtcttgcgt
ctcaggggtgggatgcagatctttgtgaagaccttgactggcaagaccatcacccttgag
gttgagcccagtgacaccatcgagaatgtgaaggccaagatccaagacaaggaaggcatt
ccccctgaccagcagaggttgatctttgcaggcaaacagctggaagatggccgcaccctc
tctgactacaatatccagaaagagtccaccctgcacttggtcttgcgtctcaggggtggg
atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccatcgagaacgtgaaggccaagatccaagacaaggaaggcattccccctgaccag
cagaggttgatctttgcaggcaaacagctggaagatggccgtaccctctctgactacaat
atccagaaagaatccactctgcacttggtcctgcgtcttcgtggtggcaattaa
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