KEGG   Polypterus senegalus (gray bichir): 120540659
Entry
120540659         CDS       T08668                                 
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
  KO
K08770  ubiquitin C
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03320  PPAR signaling pathway
psex04120  Ubiquitin mediated proteolysis
psex04137  Mitophagy - animal
psex04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120540659 (ubc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120540659 (ubc)
   04137 Mitophagy - animal
    120540659 (ubc)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    120540659 (ubc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psex04121]
    120540659 (ubc)
Ubiquitin system [BR:psex04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120540659 (ubc)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 120540659
NCBI-ProteinID: XP_039627526
LinkDB
Position
12:59286790..59289316
AA seq 457 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccatcgagaacgtgaaggccaagatccaagacaaggaaggcattccccctgaccag
cagaggttgatctttgcaggcaaacagctggaagatggccgcaccctctctgactacaat
attcagaaagagtccaccctgcacttggtcttgcgtctcaggggtgggatgcagatcttt
gtgaagaccttgactggcaagaccatcacccttgaggttgagcccagtgacaccatcgag
aacgtgaaggccaagatccaagacaaggaaggcattccccctgaccagcagaggttgatc
tttgcaggcaaacagctggaagatggccgcaccctctctgactacaatatccagaaagaa
tccaccctgcacttggtcttgcgtctcaggggtgggatgcagatctttgtgaagaccctg
actggtaagaccatcacccttgaggttgagcccagtgacaccatcgagaacgtgaaggcc
aagatccaagacaaggaaggcattccccctgaccagcagaggttgatctttgcaggcaaa
cagctggaagatggccgcaccctctctgactacaatattcagaaagagtccaccctgcac
ttggtcttgcgtctcaggggtgggatgcagatctttgtgaagaccttgactggcaagacc
atcacccttgaggttgagcccagtgacaccatcgagaatgtgaaggccaagatccaagac
aaggaaggcattccccctgaccagcagaggttgatctttgcaggcaaacagctggaagat
ggccgcaccctctctgactacaatattcagaaagagtccaccctgcacttggtcttgcgt
ctcaggggtgggatgcagatctttgtgaagaccttgactggcaagaccatcacccttgag
gttgagcccagtgacaccatcgagaatgtgaaggccaagatccaagacaaggaaggcatt
ccccctgaccagcagaggttgatctttgcaggcaaacagctggaagatggccgcaccctc
tctgactacaatatccagaaagagtccaccctgcacttggtcttgcgtctcaggggtggg
atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccatcgagaacgtgaaggccaagatccaagacaaggaaggcattccccctgaccag
cagaggttgatctttgcaggcaaacagctggaagatggccgtaccctctctgactacaat
atccagaaagaatccactctgcacttggtcctgcgtcttcgtggtggcaattaa

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