Polypterus senegalus (gray bichir): 120540666
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Entry
120540666 CDS
T08668
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03272
Virion - Hepatitis viruses
psex04145
Phagosome
psex04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120540666 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120540666 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
120540666 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120540666 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120540666 (scarb1)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Phagocytosis
Scavenger receptors
120540666 (scarb1)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120540666 (scarb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
120540666
NCBI-ProteinID:
XP_039627539
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Position
12:59324828..59345674
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AA seq
503 aa
AA seq
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MATSKSKIAIGLCVAGLLMTVFGIVLMFVGPTVVNQQVVKNVQINPNNELSYTMWRDIPV
PFFMSIYFFDVLNPEEILKGEKPMVQQRGPYVYREFRQKTNITFHSNNTVSYQEYRKYHF
FRNMSVGNESDEVTLPNMLALGAAVMMEDQPNWMKMIMSITFNQLNVKPFLTLRVGDLLW
GYDDPLVDFLSKWFPGMIPFSGKFGLFADFNNSNTGLFTVHTGADDIRKVHMVDSWNGLK
KVSYWNSDQCNMINGTAGQMWPPFMTPESTLPFYSPDACRSMELVYEKPGVVSRIPVYRF
VAPKTLFANGTVYPPNEGFCPCRESGIQNVSTCRYSSPTFISSPHFYNADPVLLQTVDGL
SPNEEEHGLFIDIHPMTGIPMNCSIRLQLSLYIKKVSGISLTAKIAPVVLPMIWFAESGY
IDGPVLTTFYNNLVLIPFILQTLQYMLPVVGILLLVLSLILGLYDKVFSCNLNHSSANEP
KQVESNSPSEKLTNNAVIHEVHF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcgaaaagtaaaattgccattggtctgtgtgtggcggggcttttgatgacg
gtttttggcatcgtcctaatgtttgttggacctactgtggtgaaccagcaagttgttaag
aacgttcagatcaaccccaacaatgagctgtcttacaccatgtggagagacattccagtc
cccttctttatgtccatctatttttttgatgtcctcaatcctgaagaaatcttgaaggga
gagaagccaatggtacaacagcgggggccttatgtttacagagagttccgtcagaaaacc
aatataacatttcacagtaacaatacagtctcgtatcaggagtatcgcaaataccatttt
tttaggaacatgtctgttggaaatgagtctgatgaggtcactctcccaaatatgctggca
ttgggagcagctgtaatgatggaagaccaacctaactggatgaagatgattatgagtatc
acatttaatcagctcaatgtgaagccatttctgacattaagagtgggggatcttctgtgg
ggctacgatgatccccttgttgatttcctaagcaagtggtttccaggcatgattcctttc
tccggaaagtttgggctctttgctgatttcaacaactccaacacaggtttgttcacagtt
catactggagcagatgacatcagaaaagtccacatggtggattcatggaatggactgaag
aaggtgagttactggaattcagatcaatgtaacatgattaatggtacagcaggacagatg
tggccccctttcatgacacctgaaagtactcttccattctacagtcctgatgcctgcagg
tcaatggaactggtctatgaaaaacctggagtggtatccaggattccagtatatcgtttc
gttgccccaaaaacgttatttgccaatggaactgtctatcccccaaatgagggtttctgc
ccatgcagggagtctggaatacagaacgtcagcacatgccgttacagttctccaactttc
atctcttcaccccatttctataatgctgatccggtgttgctccaaacagtggatggccta
agccctaatgaggaggagcatgggctgttcatcgatatccatccaatgactggcattccc
atgaactgctcaatccggctgcagctaagcttgtatataaagaaagtcagtggcattagt
ttgacagctaagattgcccctgttgtccttcctatgatctggtttgctgagagtggttac
attgatggaccagtcctgacaactttctacaacaacttggtgctcattccatttattttg
caaactcttcaatacatgctgcctgtagttgggatcctgctactagtcctctctttaatt
ctgggactctatgataaggtctttagttgtaatttaaaccactcgagtgcaaatgagcca
aaacaggtcgaaagcaacagcccaagtgagaagctaacaaacaatgcagtgatacatgaa
gtccatttctag
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