Polypterus senegalus (gray bichir): 120540703
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Entry
120540703 CDS
T08668
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120540703 (hnf1a)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120540703 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Motif
Other DBs
NCBI-GeneID:
120540703
NCBI-ProteinID:
XP_039627625
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All DBs
Position
12:60330373..60354475
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AA seq
601 aa
AA seq
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MVTRLTCLQQELLRALLSSGLKKHTILEALGEIEAFRAKPGESEEGDGVEPRMGEEESSE
DGEEFEPPIFKELEALCPEEAAQQRALVDHLLQEDPWHVAKVIKSYMQQHNLPQREVVDA
TGLNQSHLSQHLNKGTPMKNQKRAALYTWYVRKQGEITQQFTNASRGILGEEPNDDMTSK
KARRNRFKWGPASQQILFQAYERQKNPSKEEREVLVEDCNRAECIQRGVSPSQVQGLGSN
LVTEVRVYNWFANRRKEEAFRHKLAMDSYSGQPAHNTPQVTGHSGHNLQASPPHGGRYSQ
QSSSSILTSTSAHMSGLQSTQVIVQSPSPTGLQPSHTLMVSDSKEVTLGSLPPVSTLTAL
HGLSSPTAQPQTQTPGLIMASLPSIMTISPGDSSLVIGLASSQAQNVPVINTVASSLTTL
QPVPFQQHLTSAHQQQVIPPFQSNMTQGSFMTSLQPAHGGSEVGKGAVLFGGIPVHPLKP
AHVYNHKSELSQDIPNSLFTQTMVITETGQLGAFTNLTAVKQVLPSDSDSQTAMSIQPPD
SPTPVGQLSSSDSLQHLDSGSSVSAPSSSLVMYLTSQSIDSHPHLLSPSAFIPTQIASPT
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaggcttacgtgcctgcaacaggaactgctccgagcgctgctcagctcgggc
ctcaagaagcacaccatactagaggcgctgggagagatcgaagcattccgagccaagccg
ggagaaagcgaggagggggacggagtggagccacgcatgggggaggaggagagctctgag
gatggggaggagtttgaaccccctatattcaaggagcttgaggccttgtgcccagaagag
gctgcccagcagcgggccctggtggatcacctcttacaggaggacccatggcatgttgcc
aaagtgatcaagagctacatgcagcaacacaacctccctcagcgggaggtggttgatgcc
acaggcttgaaccagtctcacttatcacagcatctgaacaagggcactcccatgaaaaat
cagaagagggcagcactgtacacgtggtatgtgcggaaacagggagagatcacccagcaa
ttcaccaatgccagccgaggaatcctgggggaagagcctaatgacgatatgaccagcaag
aaggctagaagaaaccgatttaagtggggtcccgcctcccagcagatcctctttcaagcc
tatgagcggcagaagaacccaagcaaagaagagcgagaagttctggtggaagattgtaac
agggcggagtgtatccagcgtggcgtctccccgtctcaggtacaagggctcggttcaaac
ctggttactgaggtgcgggtctacaactggtttgccaatcgtcggaaggaggaggcattc
cgacacaaacttgcaatggactcatacagtggtcagccggcccacaataccccacaggtg
acaggtcacagtggccacaacctgcaggccagccccccacacggaggccgatacagccaa
cagtccagtagcagcatcttgacctccacctctgcccatatgagtggcctccagtccact
caggtcatcgtgcagtccccatcacccactggcctccaacccagccacactctgatggtc
agtgatagcaaagaggtcactctgggttcactacctcctgtcagcacgctgacagccctg
catggcctgtcttcacctactgctcagccccagacgcagacccccgggctcatcatggca
tccttgcccagtatcatgacaatcagccctggagactcctctctggtcataggtcttgca
tcttcacaggcccagaatgtgccagtcatcaacacagtggccagcagccttacaacctta
cagccagtgccattccagcaacacctgacctctgcacaccagcagcaagtcataccacct
tttcagagtaacatgacacagggctccttcatgacatctcttcagcctgcgcatggaggg
tccgaggtgggcaagggtgcggttctgtttggtggtattccagtgcatcccctgaagcct
gctcatgtatacaatcacaaatcggagctgtcacaagatatccctaatagcttgtttaca
cagacaatggtcatcacagagactggacaacttggtgccttcacaaacctcactgctgtc
aaacaggttctcccttcagattctgacagccagactgccatgtcgatccagccaccagat
tccccgaccccagtgggacagttgtccagttcagactccctacagcacctagacagtggc
tcatcagtgtcagccccatccagcagcctagtgatgtacctgacctcacagagcatcgac
agccacccgcatctcctctcgcctagtgccttcatccccacacagatcgcttcacccacc
cagtag
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