KEGG   Polypterus senegalus (gray bichir): 120540717
Entry
120540717         CDS       T08668                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03013  Nucleocytoplasmic transport
psex04141  Protein processing in endoplasmic reticulum
psex04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120540717 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120540717 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    120540717 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psex03019]
    120540717 (sec13)
   04131 Membrane trafficking [BR:psex04131]
    120540717 (sec13)
Messenger RNA biogenesis [BR:psex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120540717 (sec13)
Membrane trafficking [BR:psex04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    120540717 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    120540717 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    120540717 (sec13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 120540717
NCBI-ProteinID: XP_039627644
LinkDB
Position
12:49919720..49942562
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILSSCSYDRKVIIWKEENGTWDKMYEYTGHDSSVNSVCWGPYEFGLIL
ACGSSDGAISLLTFTGDGQWEIKKIANAHTIGCNAVSWAPAVVPSSLIDQPSGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNAWTVKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITEGQQSEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtgtctgtaattaacacagttgacacatcccatgaggacatgattcatgatgcccag
atggattattatggtactcgacttgccacatgttcttctgaccgatcagttaaaatattt
gatgttaagaatggaggacagatcctcgtagcagacttaagaggtcacgaaggaccagta
tggcaagtagcatgggctcatccaatgtatggcaatatactgtcatcttgttcctatgac
agaaaagtcatcatttggaaggaagaaaatggaacttgggacaagatgtatgaatacact
gggcatgattcttcagtaaattctgtttgttggggaccatatgagtttggactgattctt
gcatgtggtagctctgatggtgcaatctccttgcttacctttactggagatggacaatgg
gaaatcaagaagattgccaatgcacatacgattggctgcaatgcagttagctgggctcct
gctgttgtacctagtagtcttattgaccagccgtctggacagaagccaaactacatcaaa
agatttgtctctggaggttgcgacaatctggtcaaattatggaaggaagaagatggtcag
tggaaagaagatcaaaaactagaggcgcacagtgattgggttagagatgtagcttgggct
ccttcaataggtcttcctacaagcacaattgccagttgttcacaggatggcagagtattt
atctggacctgtgacgatccagcagggaatgcttggacagttaagcttctacacaaattc
aatgatgttgtttggcatgttagttggtccatcactggtaacattcttgctgtgtctgga
ggagacaacaaggtaactttatggaaagaatctgtggatggccagtgggcttgtattagt
gatgttaacaaaggccagggagcagtgtcctctatcacagaaggtcagcagagtgagcag
tga

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