Polypterus senegalus (gray bichir): 120540718
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Entry
120540718 CDS
T08668
Symbol
rnf10
Name
(RefSeq) RING finger protein 10 isoform X1
KO
K26979
E3 ubiquitin-protein ligase RNF10 [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120540718 (rnf10)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120540718 (rnf10)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120540718 (rnf10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-ANAPC11
TRAF3_RING
Blo-t-5
zf-ACC
zf-RING_6
zf-Nse
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
120540718
NCBI-ProteinID:
XP_039627645
LinkDB
All DBs
Position
12:complement(60448111..60474143)
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AA seq
785 aa
AA seq
DB search
MLESPERASLYFGYWNYSNSMEKNGSSSTNNKPPPRSGSAGPVPGESKPKTDGKNGTGSK
QRYNRKREPNYPKPEYFSGPVRRPNPQKGKAFDKRPPQRGGANRQYGCPGGGRREEVAEV
QRAEFSPAQFTGPKKINLNHLLNFSFEPRGQGSSGSDCNGGWGRRNKWGHKMKPFNKELF
LQANCQFVVSEDQDYAAHFADPDTLVNWSFIQQVRIYSHEVPSCPICLYPPVAAKITRCG
HIFCWACILHYLSLSEKTWSKCPICYEAVHKTDLKSVVAMETRQYQAGDTITMQLMRREK
GVLVALPHSRWMKVEEPIHLGDDLHSQYSKLLLASQAQVLQQVVEVERASLQKQYMEEEH
TLESCFIESALLELKERENALLAAYPSNEVDLKLEALNINPASSEVLPAKVASDHVPAAK
PVLQYSSAFDDEVVDPVFEENISEGLSHLDPKLIPEPELKPVPCSVVEKQLCAEQSESVS
DSSGNVPYYYFYQAEDGQQMFLHPINVRCLVHEYGSLEKSPEKIEAVVVEIDGYSMNEEM
RRRHRYLSHLPLTCEFSICELALQPPLLSKETLLTFTEDIEKRKRFRQKKARDERRREWR
IEMEENKKQGKYPEVHIGLENLQQFPAFGSPPLDHSHHSNLYHLSNGIASSPPSDCHVLF
PCLGSGSPQQYGKSLEEDAHCPSFAQMLREGKAKADGWPKAAPIKAESLLAPPAPDSDGE
SDGSDRAPVPNFQNSFSQAFEAALLQLDKIPGPPPGLVGNAGDKNGKKKKKKQKLLFSTS
VVHTK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgctagagagtccggaacgggcctctctgtacttcggctactggaactacagcaactca
atggagaagaacggcagcagcagcaccaacaacaaaccgcctccccgctccggctctgcc
gggccagtgcccggggagtctaaacccaaaacagatggaaaaaatggaactggatcaaaa
caacgttacaaccgcaaaagagaacccaactatccaaaaccagagtacttctccgggccg
gttcgccgtcccaacccacagaaaggcaaggcctttgacaaacgtcctccccaaagggga
ggggcaaataggcagtatggctgccctggagggggcagacgagaagaggtagcagaggtt
caacgggctgaattcagccctgctcaatttacaggtccaaagaagatcaatctgaaccac
ctcctgaattttagttttgagcctcgtggacagggaagctctggctcagactgtaatgga
ggttggggaaggcggaacaagtggggtcacaaaatgaagccctttaacaaggaactattt
ctccaggccaactgtcagtttgttgtttctgaggaccaggactatgcagcacactttgca
gatcctgatactttggtcaattggagttttatacagcaagtccgtatttatagccatgag
gtaccatcttgcccaatttgcctatatccaccagtagctgccaagataacacgatgtggc
catatcttctgctgggcttgcatcttgcattacctttcgcttagtgagaagacctggagc
aaatgtcctatttgctatgaggctgttcacaagactgacctaaaaagtgttgttgccatg
gagactcgtcaatatcaagcaggtgacaccatcacaatgcagttgatgcggcgtgagaaa
ggagtgcttgtggccttgcctcactccaggtggatgaaagtggaggagcccatccacttg
ggagatgatcttcatagccagtattctaagttacttttggcatctcaagctcaagtgctg
caacaggtggtggaggtggagagagcatcacttcaaaagcaatatatggaggaagaacat
actttggaatcatgcttcatagagtctgccctgctggagctaaaggaacgagagaatgcc
ttacttgctgcttatccaagtaatgaagtggatctcaaactggaagcactgaatataaat
cctgcttcctcagaagtactgcctgccaaggtagcatctgaccatgttccagctgccaag
cctgtacttcagtattcctctgcttttgatgacgaagttgttgatcctgtctttgaagag
aacatttcagagggtttgtcccatttggatcccaaattgataccggagcctgagcttaaa
ccagtgccatgctctgttgtagagaagcaattgtgtgctgaacagtctgaatctgtgtct
gactcaagtggaaatgtcccatactactatttctatcaggctgaagatggtcaacagatg
ttcttgcatccaattaatgtacgctgtctagtacatgagtatggttccttggagaaaagt
cctgaaaaaattgaagctgtagttgtggaaattgatgggtattccatgaatgaggaaatg
cgtcgaagacaccgctacctatctcacctcccattgacctgtgagttcagcatttgtgaa
ctggcactgcaacccccattactgtcaaaggaaaccctcctaacttttacagaggacatt
gaaaagcgaaaacgctttcgtcagaagaaggctcgtgatgagcggaggagggaatggaga
atagaaatggaggaaaacaagaaacagggaaagtatccagaggttcatattggtttggaa
aatttgcagcagtttccagcctttggttctcctcctttagaccacagccaccactctaat
ttataccacctttcaaatggcatagcatcaagtcctccttcagactgccatgtcctcttc
ccatgcttaggaagtggaagcccacaacagtatggaaagagcttggaggaagatgcccac
tgcccctcctttgcccagatgctgcgagaaggaaaggcaaaagcagatggatggccaaaa
gcagctccaataaaagctgaatccttgcttgcaccaccagcccctgacagtgatggggag
agtgatgggtcagaccgagcccctgtgcccaactttcagaattcattcagtcaggcattt
gaagcagccttacttcagttggacaagattccaggaccaccaccagggcttgttggaaat
gcaggagataaaaatggaaagaagaagaaaaagaagcaaaagctcttgtttagtacctct
gttgttcatacaaagtaa
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