Polypterus senegalus (gray bichir): 120540729
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Entry
120540729 CDS
T08668
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120540729 (tfip11)
Spliceosome [BR:
psex03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120540729 (tfip11)
Other components
Complex C specific factors
120540729 (tfip11)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
120540729
NCBI-ProteinID:
XP_039627682
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Position
12:complement(60749010..60760414)
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AA seq
836 aa
AA seq
DB search
MSLSHLYGRGVEEEDDDVEVESFEISDWDLQNEFNPNRQRYRQTKEDSIYGMWAQHDSDE
ERPSFGGKRSKDYSAPVNFISAGIRKSAAEEQEDIEDSDDSDSTEKKRREEKPKDTGPKK
LQTGGNFKTTQKGFAGGQRQGQEFGTWERHTRGIGQKLLQKMGYVPGKGLGKNAQGILNP
IEAKVRKGKGAVGAYGAERTSQSLQDFPIVDSEEEEEQEFQKEMSQWRREPGQSRKKPKY
SYKTVEELKAKGYVFGKNMSAPPAELAQVKVIDMTGREQKVYYSYSQMSHKHNVPEEPAM
AMTGKEPKTRGFELPELEHNLQLLIDLTEQEILQGARRLQHEKDMVVSLSHESEKLEETL
KQEERAIGRVQRVLELVESYERRMGAKEGSEEEPLTLADCVRMFEKLQKDFYEEYKAFGL
ADMAVPMVHPLLKEYFKNWDPLKDRVFGIEIIGKWRVVLETGQLAHSGPDMTTMDPYHRL
LWEVWMPLVRSCVTNWQPRNCGPMVDFLESWVPILPVWIMENILEQLIFPKLQKEVENWN
PLTDTVPIHSWIHPWLPLMQARLEPLFPPIRSKLSNALQKWHPSDGSAKLILQPWKDVFT
PGSWEAFMVKNIAPKLGLCLSEFVINPHQQHMEPFYWVLDWEGMLSLSSLVSLLDKHFFT
KWLQVLCSWLSNNPNYEEITKWYLGWKSMFSDAILAHPSIKEKFNEALDIMNRAVSSGIG
VYMQPGARENIAYLTHTERRKDFQHEAMQERREAESIAQRSIGATATIPTNFKDLIQAKA
EEHNIVFMPVVGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttctcacctctatgggcgtggtgtggaggaggaggatgatgatgtggaggtg
gagagctttgagatctcagactgggacctgcaaaatgagttcaaccctaatcggcagcgc
taccggcagaccaaagaggactccatctatgggatgtgggcgcagcatgactctgatgag
gagaggcctagctttgggggcaaaaggtcaaaggactattcggctcctgtgaattttatc
agtgctgggatccgcaagtcagctgcagaggaacaggaggacatagaagattcagatgat
tcagacagtacagagaaaaaaaggagagaggagaagcccaaggacacaggacccaaaaag
cttcagacgggaggaaactttaagactacccagaaagggtttgcaggtggtcagcgtcaa
ggccaggagtttggcacatgggaacggcacacacgtgggattgggcagaagctactgcag
aagatgggatatgttccaggaaagggacttggcaagaatgcacaaggtatcctgaaccca
attgaagccaaagtgcgaaaagggaagggagcagtaggggcctatggtgcagagaggaca
tcacaatcattacaggatttccctattgtggattcagaagaagaggaggaacaggagttc
cagaaagagatgagtcagtggcggcgggagccaggtcagagtcgcaagaaaccaaaatac
tcttacaaaacagttgaagaattgaaagccaagggatatgtgttcggcaagaacatgtca
gcacctccagctgagctggcacaagtaaaggtcattgacatgactggtcgtgaacagaaa
gtctactatagctatagccagatgagccacaagcataatgtaccagaggaacctgctatg
gcaatgacaggaaaagagcccaagacccgtggatttgagctacctgagctggagcacaac
ctacagcttctcattgaccttacagagcaagaaattctccagggggctcgcaggcttcag
catgagaaagacatggtagtatctttgtcccatgagagtgaaaaactagaagagacgctt
aagcaggaggaacgggccataggcagagtgcagcgggtgctagaactggtggagtcgtat
gaacggcgaatgggtgccaaggaaggaagtgaggaggagccactcacattggctgactgt
gtccgtatgtttgagaagctgcagaaagacttctacgaggaatacaaggcatttggtctt
gcggatatggctgtacccatggtgcaccctcttctcaaggagtattttaagaactgggat
cctctcaaggacagagtgtttggcatcgaaatcattggcaaatggagagtggtactggag
actggacagctggctcacagtgggccagatatgacaactatggacccttatcataggttg
ctttgggaagtatggatgcctctggtcagaagctgtgtgacaaactggcaacccaggaac
tgtggccccatggtggattttctggaaagctgggtccccatcctgcctgtgtggataatg
gaaaatatcctggagcagctcatcttccccaaactacaaaaagaggttgagaactggaac
cctctcacagatacagtgccgatacactcatggatccacccttggctgcctctcatgcag
gcacgtttagaaccactctttcctcctatccgtagtaaactatctaatgccttacagaag
tggcaccccagtgatggctcagccaagcttatattacagccttggaaggatgtcttcacg
cctggatcatgggaagcttttatggtgaagaatattgctcctaaactgggcctttgtctg
agcgagtttgtaattaatccccatcaacagcatatggagcccttctactgggtgctggat
tgggaaggtatgctgtctctgtccagtctggtaagcttgctagacaagcacttcttcaca
aaatggcttcaggttttgtgttcctggctcagcaataatcccaattatgaggagatcacc
aagtggtatttgggctggaagtcgatgttttcagatgctatccttgcacacccttcaatc
aaggagaagttcaatgaggctctggacatcatgaacagagctgtgtcatctggaatcggt
gtctacatgcagccaggagctcgtgaaaatattgcctacttgacccacactgaaagacga
aaagatttccagcacgaggctatgcaggaacgtcgagaagcagagagcatagcccagcgt
agcattggagcaactgctaccattcccaccaactttaaggaccttatccaggctaaagct
gaggagcacaatatcgtttttatgcctgtggtgggcaagcgccatgagggcaagcagctt
tacacatttggccgtattgttatctacattgaccggggcgtggtctttgtacagggagaa
aagacttgggtgccaacatcattgcagagtctaattgacatggccaaatag
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