Polypterus senegalus (gray bichir): 120540768
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Entry
120540768 CDS
T08668
Name
(RefSeq) uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120540768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120540768
Enzymes [BR:
psex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
120540768
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120540768
Prokaryotic type
120540768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
120540768
NCBI-ProteinID:
XP_039627753
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All DBs
Position
12:complement(62111208..62115878)
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AA seq
304 aa
AA seq
DB search
MIGQKTINSYFSPINKKRLSENDEETKNISIQEPEEILTPVKRRKVEENGTPISPPLSPE
QLQRMEKNKRAALEKLASRGVPEGFGSSWKEELLPEFNKPYFTKLMAFVAEERKRHTVYP
PAHQVFTWTQMCDIWDVKVVILGQDPYHGPSQAHGLCFSVQRPVSPPPSLENMYKELESD
IEGFKHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDRGWEQFTDAVIQWLNNNQEGL
VFMLWGAYAQKKGSCIDRKRHHVLQAVHPSPLSAHRGFFGCKHFSKTNDFLKKLGKKPIN
WKAL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgattgggcaaaaaactattaactcttacttctccccgataaacaaaaagcgactgtcg
gaaaatgacgaagagacaaaaaatattagcattcaagaacccgaagagatccttacgccg
gtcaaaagacgcaaggttgaagaaaatggcaccccgatctcgccacctctcagtccggag
caacttcagcggatggaaaagaataagcgtgctgccctcgaaaagctggcgtcgcgcggc
gtcccggagggctttgggagtagctggaaagaggagctgctacccgaattcaacaagcct
tacttcacaaaactcatggcatttgtagcagaggaaaggaagcgtcatacagtatatcca
ccagcccatcaagtattcacctggactcagatgtgtgacatttgggatgtaaaagttgtg
atcttgggtcaggacccttatcacggtcccagccaggcacatgggttgtgctttagcgtc
cagagacctgtttcacctccacccagtttagaaaatatgtacaaagaactagaatcggac
atagaagggtttaagcatccaggacatggcgaccttacaggatgggcaaaacaaggtgtt
ctgcttctcaatgcggtccttactgtccgagctcatcaagccaattctcacaaggatcga
ggctgggagcagttcactgatgcagttatacagtggctgaataataaccaggagggtctt
gtcttcatgctttggggagcatatgcccagaagaaaggctcttgtattgaccggaagcga
catcatgtcctccaggctgttcatccatctcctctctctgcccatagaggattttttggt
tgcaagcatttttccaagactaatgatttcctcaagaaactgggaaagaagccgattaat
tggaaggctctatga
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