Polypterus senegalus (gray bichir): 120540815
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Entry
120540815 CDS
T08668
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34-like isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120540815
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120540815
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120540815
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
SAP
HeH
ARMET_C
Prok-RING_4
zf-C3HC4_2
FYVE
zf-RING_5
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
120540815
NCBI-ProteinID:
XP_039627823
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All DBs
Position
12:63569464..63585929
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AA seq
374 aa
AA seq
DB search
MKPIFEAGASSMWASCCGLINEVMGTGAVRGQQPGFGPGAGPFRFAPNAGYSTYPPPSPG
NATIVCKACGLTFSVFRKKHICFDCKKNFCSVCSVLEENLRRCSTCHLLRETAFQRPQLM
KLKVRDLRQYLVLRNIPTDTCREKEDLVELVLCHRGTDLEEDMDTSSLHSTVSLFATPSE
PSLSASLGETPSRRESLGAVNEEEGGTSSINQETEENAEQEATPLSRKRARASISDISSI
EDIEGLTVRQLKEILTRNFVNYSGCCEKWELVERVSRLYRETEENKKSMENVNSSLTSVV
PTNPQAICSSGSADGEKMHFTNDDNLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPI
CRQYVVRAVHVFKS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattttcgaggccggggcctcgtctatgtgggcttcatgttgtggtctaatc
aatgaagtaatgggcactggagcagtgcgaggccagcagccaggatttggaccaggagct
gggcctttcaggtttgcccctaatgctggctattcaacataccctccaccatctcctgga
aacgcaactatagtttgcaaggcctgtggattaacattctccgtattcaggaaaaagcat
atctgttttgactgcaaaaagaacttctgttctgtgtgctcggttctggaagaaaacctc
cgacggtgttcaacttgccatttgttgagagaaactgcattccaaaggccacagctcatg
aagctgaaagtgagagacctgcggcaatatctggtcctgagaaacattccaacggacaca
tgccgtgagaaggaggacttagtggaactggtcttatgccaccgagggacagacctggaa
gaagacatggacacaagtagtctccactccactgtatctttgtttgccactccctcagag
ccctcactttctgcctctctgggcgaaactccaagccgaagagaaagccttggagccgta
aatgaggaagaaggaggaacatcatcaataaatcaggagacagaagaaaacgcagagcaa
gaggctactccattatccaggaaaagagcaagagcctcaatctctgacatatccagcata
gaagatattgaaggtctaacagtccgacaactaaaagagatcctgacgcgaaactttgtg
aattattctgggtgctgtgaaaaatgggaacttgtggagcgagtcagccggctctatcga
gaaacagaagaaaacaaaaaatcaatggaaaatgtgaatagcagcctaacatcagtggta
cccacaaatcctcaggccatctgcagcagtggcagtgcagatggggagaagatgcacttt
accaatgacgacaacctctgcaggatctgcatggacgcggtgattgactgtgtgctcctg
gaatgtggccacatggtcacatgtaccaagtgtggcaagaggatgagtgaatgtccgata
tgtcgacaatatgttgtgagagcagtgcatgttttcaagtcttaa
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