Polypterus senegalus (gray bichir): 120540869
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Entry
120540869 CDS
T08668
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120540869 (sbno1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120540869 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120540869
NCBI-ProteinID:
XP_039627924
LinkDB
All DBs
Position
12:complement(65083308..65113753)
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AA seq
1422 aa
AA seq
DB search
MMDPGQDLLLAALSESGISPNDLFDVDPLDSGLATPIPSVALQQSVPISALELGLGTESA
IAVKPDTSVTIKQEPGLPLTSSINIRKPQPSTTTFVLNQLNQLPSLGTMVVTRPAAGSTS
RPSITMTKIVHGTAPTCQSPASPGMQSTLSAPGKDQIQLKDLLKNNSLNELMKLKPPSNI
AQPVATATKIIVLSTKVIKQAELNNGVKKEITNKEVARIWVNDDLKVRSFSPTSHQNAYS
MSAVPKIPGIKEEEEQEEDEEEELGHAETYAEYMPMKLKIGLRHPDQVVETSSLSSVSPP
NVWYRLSIPEETIDRGWLSALQLEAITYAAQQHETFLPNGDRAAYLIGDGAGVGKGRTIA
GIIYENYLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSV
KKGVIFATYSSLIGESQSGGKYKTRFKQLLHWCGDDFDGVIIFDECHKAKNVCPIGSSKP
TKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFSNFIQAVER
RGVGAMEIVAMDMKLRGMYIARQLSFAGVTFKIEEVPLSQDYIKMYNKAVRLWVSAREKF
QLAANLMDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVSRVVQLAREEIKNGKCVVIGLQ
STGEARTLEALEEGGGELNDFVSTAKGVMQSLIEKHFPAPDRQKLFSLLGIDLSSKKTPP
PSDKPSNEATGKKRKGMDVKKEAKKPRKSGGLGGSSSENSDSDSVSEDEVDSDNDSFKSV
SSGEDDEDDFNPFRDESSEDEEDDPWLIRKEHKKNKEKKSKKKKSVDPDSIQSALLASGL
GSKRPSFSSQAVKSTSSVAPSTVKKESDTSSCVTSQDAVEAAQQMKRELLEELEKLSGDL
PPNTLDELIDDLGGPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFM
DGEKNIAIISEAASSGISLHADRRVQNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTA
PEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIV
MKSIVNFDSPIVSPPASFEGDFFKEIRQGLIGVGLINVEDRSGILSLDKDYNHIGRFLNR
ILGMEVQQQNALFQYFSDTLNAVIQNAKKNGRYDMGILDLGSGDEKVKKSDVKKFLTPGY
STSGHVELYTVSVERGMSWEDAMKVWAEQSGTDDGFYLQIRNNKKTAIIVKEVNTKKRLF
LVYRPNTGKQLKMETYADIRKKCKKVLSDDAKQHWMDQYISSADICSHAYWRGNCKKASI
GLQCEVGLRCRTYFVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIP
ANCVSPLINILSSSDQSQQIAVQQQQMWQQLHPQSINHFSNT
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccaggtcaggatcttttacttgctgctttaagtgagagtggaataagtcca
aatgacctgtttgatgttgaccccctggattctgggttggctaccccaattccttctgtt
gctcttcagcagtctgtgccaattagtgcgttagagcttggcttgggtacagagtctgca
atagcagtgaagccagacacttctgtgacaattaagcaggagccaggtcttccacttact
tcatcgatcaacattcggaaaccgcagccatcaaccacaacatttgtcttgaatcagtta
aatcagctgccatcactgggaacaatggttgtaaccagaccggctgctggtagcacttcg
aggccaagtattactatgacaaagattgttcatggtacagcaccaacttgccagtcacca
gccagtccaggaatgcagagcacactgtcggcacctggcaaagatcagattcaactgaaa
gaccttttgaaaaataatagtctcaatgagctgatgaaactgaagccaccatccaatatt
gcacaaccagtggcaacggctaccaagattattgtactttcaacaaaggtgataaaacaa
gctgagcttaataatggagtaaagaaggaaatcacaaacaaggaagtggcacgaatttgg
gtaaatgacgatctcaaagtacggagcttctcccccactagccatcagaatgcttacagc
atgtcagctgtaccaaaaatacctggaataaaagaggaggaggagcaagaagaagacgaa
gaggaagaacttggccatgctgaaacttatgctgaatatatgccaatgaaattgaaaatt
ggcttacggcaccctgatcaggttgttgaaacaagctctctttcgagcgtttcccctccc
aatgtgtggtaccgactctccattcctgaggagactatagatcggggttggctgtcagcg
ctgcagcttgaagcaattacgtatgctgctcagcaacatgaaacattccttccaaatggg
gacagagctgcctacctaataggagatggagctggtgtgggcaaagggcggaccattgct
ggcattatctatgaaaattatcttttaggaaggaaaagatccctatggttcagtgtatct
aatgatttgaaatatgatgcagaaagagatttaagagacattggagcaaaaaacattcag
gtccattccttaaataaattcaaatatggaaaaatttcttcaaagcacaatggtagtgta
aagaagggtgttatatttgcaacatattcttccttaattggtgagagtcagtcaggtgga
aaatacaagacaagatttaagcagcttctgcactggtgtggagatgattttgatggtgtt
attatttttgatgaatgccacaaagctaagaatgtatgtccaataggttcttccaagcca
acaaaaactggtttagcagttttagaactacaaaacaagcttcctaaagcaagagtggtt
tatgctagtgctacaggtgcttctgagccaagaaacatggcatatatgaatcgacttgga
atctggggtgaaggaactccatttaaagagttcagcaattttattcaagcagtcgagaga
agaggtgtaggggccatggaaattgtggctatggatatgaagttaagagggatgtacata
gcaagacagctaagctttgctggtgtaactttcaagattgaagaggtacctctgtcccaa
gactacatcaagatgtataataaagctgttcggttgtgggtgtctgctagagagaagttt
cagttggctgccaatctcatggatgcagaacagaggatgaaaaagtcaatgtggggacag
ttctggtcagcccatcagaggttcttcaagtatctctgcatagcatccaaagtgagcagg
gtggttcagctggctcgtgaagaaattaaaaacggcaagtgtgtggttattggcctccag
tccactggagaagctcgaacactggaagcactggaagagggaggtggagaactgaatgac
tttgtctccactgcaaaaggggtcatgcagtcccttatagaaaagcattttccagctcct
gacagacagaagctcttcagtttgctgggaattgatttatcttccaagaaaactcctcct
cccagtgataaaccctccaatgaagcaacaggcaaaaaacgcaaaggtatggatgtaaaa
aaagaggccaagaagccgcgcaaatcggggggtcttggtggcagcagttcagagaacagt
gacagtgactctgtttctgaagatgaagtagacagtgacaatgacagtttcaagtctgtc
agttctggagaagatgatgaggatgatttcaatccatttagggatgaatctagtgaagat
gaagaggatgacccttggctgattcgaaaagaacataagaaaaacaaagagaaaaagagc
aagaagaaaaaaagtgtagatcctgactccattcaaagtgccttgttagcttctggtctt
ggatcaaaacgaccgtccttttcatctcaagctgttaagtccacttctagcgtcgcacct
tcaactgttaagaaagaaagcgacactagcagctgtgtgacgagtcaggatgcagtggag
gcagctcaacagatgaaacgagagctgcttgaagagctggaaaagctgtctggagacttg
cccccaaatactctggatgaactgattgatgatcttggtggccctgataatgtggctgag
atgactggacgcaaaggcagagttgtaagcaatgatgatggaagcatctcctatgaatct
cggtctgaactggatgtacctgttgaaattttgaacattacagaaaagcagaggttcatg
gatggagagaagaacattgccataatctctgaagcagcaagttctggcatttctctgcat
gcagacagaagagtccaaaaccagcggaggcgagtgcacatgactttggaactgccgtgg
agtgctgatcgagctattcagcagtttggaaggacacacagatccaaccaggtgacagcc
ccagagtatgtgttccttatatctgagctggctggtgagcaaagatttgcttctattgta
gcgaaaaggctggaaagtctgggtgctctcacacatggagatagaagagctactgaatct
agagatctaagcagattcaactttgataataagtatggtagaaatgctttggaaatcgtc
atgaagtctattgtaaatttcgattctcctattgtgtctcctcctgcaagttttgaaggg
gatttcttcaaagaaattcggcagggattaataggtgttggcttgataaatgtggaagat
cgttctggaatcctcagcttggataaagattataaccacattggccgattcttaaatcga
attttgggcatggaggtgcaacagcagaatgcactatttcagtacttctcagatacttta
aatgcagttattcaaaatgcaaaaaagaatggaagatacgacatgggcattttagatctc
ggatcaggagatgaaaaggttaaaaagtcagatgtcaaaaaatttctcactcctggatat
tctacatcaggtcatgtggagctctatacagtaagtgtagaaagaggcatgtcttgggaa
gatgccatgaaagtatgggctgaacaatctggaacggatgatggcttttatttgcagata
agaaataataaaaagacagcaatcattgttaaagaagttaacaccaaaaagaggctgttt
ctggtatacaggcctaatacggggaaacagcttaaaatggagacctatgcagatattcgg
aaaaaatgcaagaaggtactttctgatgatgccaaacagcattggatggaccagtacatt
tcttcagcagacatttgctcacatgcttactggcgaggaaattgcaaaaaggcatcgatt
ggattacaatgtgaagttggcttgcgctgcagaacctactttgttctgtgcgggtctgtc
ctgagtgtgtggacaaaagtagagggcgtgctagcatctgtgagtgggacaaatgtcaaa
atgcagattgtccgcttgagaacagaggatggccaaaggattgtgggtctgatcattcct
gccaactgtgtgtcgcccctcatcaatatcctctcgtcgtccgatcaatcgcagcagatt
gcagtgcaacaacagcagatgtggcagcagctccatccgcagagcatcaatcatttcagc
aacacatag
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