KEGG   Polypterus senegalus (gray bichir): 120540879
Entry
120540879         CDS       T08668                                 
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03022  Basal transcription factors
psex03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120540879 (gtf2h3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120540879 (gtf2h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psex03021]
    120540879 (gtf2h3)
   03400 DNA repair and recombination proteins [BR:psex03400]
    120540879 (gtf2h3)
Transcription machinery [BR:psex03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     120540879 (gtf2h3)
DNA repair and recombination proteins [BR:psex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     120540879 (gtf2h3)
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 120540879
NCBI-ProteinID: XP_039627949
LinkDB
Position
12:65239814..65259437
AA seq 301 aa
MASDDELSLLLIVVDVNPLWWGRKAQEEPEFSLSKCIDAIMVLGNSHLVMNRNNRLAVIA
SHCQESHFLYPSKHWKGGDFASDENSAGSRDGKFELLTVANDLIVQEIKHLTARTQVRGQ
QTDTLLAGSLAKALCYIHRVTKQLEAGQEMKSRILVIKAAEDCASQYMNFMNVIFAAQKQ
GVLIDACVLDAESGLLQQACDITGGLYLKIPQTTSLGQYLLWVFLPDPDQRSQLVLPPPV
HVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIALPPVLKAKKKKPKLG
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcttccgatgatgagctgagtctcttgcttattgtggttgacgtcaatccactctgg
tggggccggaaagcccaggaggagcctgagttttcattgtcaaaatgcatagatgccatc
atggttttaggaaactcgcatcttgtcatgaaccgaaacaacagacttgctgttattgcc
agccactgccaagaaagtcattttctttacccaagtaagcactggaaaggtggtgatttt
gccagtgacgagaatagcgctgggagcagagatggaaaatttgaacttctaaccgtggcc
aatgacctaattgttcaggagattaaacatcttactgctcgaacacaagtgagaggacag
cagacggacacactgctagcaggatcactagccaaagcactttgttatatccacagagtc
accaagcagttggaagcgggtcaggaaatgaagtcaagaattttggtcatcaaggcggct
gaagattgtgcttcgcagtatatgaattttatgaatgtaatctttgcagctcaaaagcag
ggtgtcttgattgatgcctgtgttttggatgccgagtctgggctgctgcagcaggcctgt
gacattactggagggctgtacctgaagataccgcagacgacgtctttgggacagtactta
ctgtgggttttcctgccagatcctgatcaacgctctcagcttgtcctgccacctcctgtc
cacgtggactacagagctgcgtgtttttgtcatcggaatctcattgagattggctacgtg
tgctcggtctgtttatccattttctgcaacttcagccccatctgcacaacatgcgagact
gctttcaagatcgctcttccacccgtcctgaaagcaaagaagaagaagccaaagctgggg
acgtga

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