Polypterus senegalus (gray bichir): 120540927
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Entry
120540927 CDS
T08668
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
psex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120540927
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120540927
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120540927
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120540927
03036 Chromosome and associated proteins [BR:
psex03036
]
120540927
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120540927
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120540927
SWI/SNF complex
120540927
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120540927
PBAF complex
120540927
SWI/SNF complex
120540927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
120540927
NCBI-ProteinID:
XP_039628046
LinkDB
All DBs
Position
12:complement(69519591..69532751)
Genome browser
AA seq
373 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGEFFMIGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKI
VASSHDHGYTTLATSVTLLKAAEVEEILEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQTEILVPIRLD
MEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDS
ILDEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagtaaaacatttggtcagaaaccggtcaaatttcagttagaagaagatgga
gaatttttcatgattggttctgaggtaggcaactacttgcgtatgtttagaggttccttg
tacaaaaggtacccatctttgtggaggagattggcatcagttgaagaaagaaagaaaatt
gttgcttcttcacatgatcacggttatacaactttggcaactagtgttactcttctgaaa
gctgcagaagtcgaggagattttagaaggaaatgatgaaaagtacaaagctgtttctata
agtactgagccaccagcctacctcagggaacagaaggcaaagcgaaatagccaatgggtt
cccactctgccaaacagctcccatcacctggatgctgtaccatgctcaaccacgataaat
cgcaaccgtatgggtcgtgataagaaaaggacatttccactctgttttgatgatcatgac
cctgcagtgatacacgagaatgcctcccaaactgaaatactggtccctatcagattggat
atggagattgatggacagaaactcagggatgctttcacatggaacatgaatgaaaaacta
atgacaccagaaatgtttgctgaaattttatgtgatgacctcgatttgaatcctttggca
tttgtccctgccattgcttctgcaattaggcaacaaattgaatcctaccccacagacagt
atcctggatgagcagacggatcagagggtcattatcaagttaaatatccacgttggaaac
atatctttggtggaccagtttgagtgggacatgtctgaaaaggagaattcaccagagaaa
tttgctctaaagctatgctcagaactaggtttaggaggggaatttgtcaccaccattgcc
tatagcatccgcggacaacttagttggcatcaaagaacctacgcttttagtgaaaatcca
cttccaactgtagagattgctattcgaaatacgggagatgctgaccagtggtgtccactt
cttgagacgttgacagatgctgagatggagaaaaagatcagagaccaagacagaaacaca
aggcggatgcgaagacttgccaacactgctccagcttggtga
DBGET
integrated database retrieval system
