Polypterus senegalus (gray bichir): 120540997
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Entry
120540997 CDS
T08668
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120540997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120540997
Membrane trafficking [BR:
psex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120540997
Protein recycling
Other Rab GTPase associated proteins
120540997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Chitin_synth_2
Cpn60_TCP1
KinB_sensor
Motif
Other DBs
NCBI-GeneID:
120540997
NCBI-ProteinID:
XP_039628155
LinkDB
All DBs
Position
12:complement(72136414..72202537)
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AA seq
493 aa
AA seq
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MSGRVKSRTLNPRPKKSTPPTWSSREKHLRYSDTLLDTGGVTRQLKNRQARAVASLPDRL
TVFYFHRRMWVEQRRIHVNQSQLLCRDGCGYYGNPAWQGYCSKCWRERKAKQPASRPRTN
AEVENIVSLSGVKRENKAKIVRGLFSSTKMAPKQGNGTAHAVDPKSGDADPPKASSPKLP
ADFTEFLKFLRKPSAQNFHQHCMTFLKMLETRRDITIQKQAEMVQDFYQSTASHFQNYSD
KQRHQMMEHIEKLLMTQLYKFVFCPDCSDDEQKDLFLQKKIRSLQWVTPCMLGVPGLEKK
SETGDHILSAMTAIIEMDARRAPQDKLSCICKCCQHVFAALAEANSEPANADDFLSSLIL
VVLKANPPRLHSNVQYVVRFGLPHNLMAGESAYNFTNLCCAVTFIEKLDGPSLNLSEDQF
QDYMQAGRSASLQESVTTNHLSSVQKAWRNIEQLAELQGRQERLTLGVQNMQKELDEWVQ
SVKEQVETVMSGS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcgcgtcaagtcgcgcaccttgaatccccgccccaaaaagtcgactccaccc
acttggagctccagggagaagcatcttcgctacagcgatacattattggacaccggtgga
gtcacgcggcagttaaagaaccgtcaagcgcgtgccgtggcgtcacttccggaccggctg
acagtgttttacttccacaggagaatgtgggtggagcagcgccggatccatgttaaccag
tcccagctgctctgcagagatggctgtgggtattacgggaatcccgcctggcaaggctac
tgctccaagtgctggcgtgagaggaaggccaagcagccggcctcaaggcctcgcactaat
gcagaagtggagaatattgtgtctctgtctggagtcaagagagaaaacaaggcgaagatc
gtgagaggactcttcagcagtaccaagatggcgccaaagcagggaaatggcacagcacac
gctgtagatcctaaatctggcgacgccgacccacctaaagcttcctctcccaagttgccg
gccgatttcacggagttcctgaagtttctacgcaagccgtcggcccagaacttccatcag
cactgcatgactttcctgaagatgctggaaactcgcagggacatcacaatacagaagcag
gcagaaatggtgcaggatttctaccagagtactgcaagccacttccagaattactccgat
aagcagagacaccaaatgatggaacacattgagaagctgctgatgacccaattgtacaag
tttgtcttctgcccagactgctccgacgacgagcagaaggatctttttctccagaagaag
ataaggtcgctccagtgggttacaccctgtatgcttggtgttccaggccttgagaaaaag
tctgaaaccggcgatcacatcctctctgccatgacagcgataatcgagatggatgccaga
cgtgcccctcaggacaaactatcctgcatctgtaagtgctgccagcatgtgtttgctgct
ctagcagaagccaattcagaaccagcaaacgcagacgacttcttatccagcctcatcctg
gtggtcctaaaagccaacccaccacgcttgcactctaacgtccagtatgtggttcgcttt
gggcttccacacaacctcatggccggagagtcagcttacaattttacaaatctgtgctgc
gctgtcacttttattgagaagctggatggtccttccttgaatctctctgaagatcagttc
caagactacatgcaagctgggaggtcagcctctctgcaggagtctgtgaccacaaaccac
ttgagcagtgtgcagaaggcctggaggaacatcgagcagcttgcagagcttcagggacga
caagaacgactgacactgggagttcaaaacatgcagaaagagctggatgagtgggtacag
tctgtaaaagaacaggtggagactgtgatgtcaggcagctga
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