Polypterus senegalus (gray bichir): 120541016
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Entry
120541016 CDS
T08668
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120541016 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120541016 (dtx1)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120541016 (dtx1)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120541016 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
WWE_5
zf-RING_2
zf-RING_11
zf-ANAPC11
zf-UDP
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
120541016
NCBI-ProteinID:
XP_039628179
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All DBs
Position
12:complement(72719567..72818021)
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AA seq
611 aa
AA seq
DB search
MLSVGYPSQNLARVVVWEWLNEHGRWRPYSAAVCHHIENVLKGDPRGTVVLGQVDPQLAP
YIIDLQSMHQFRQDTGTMRPVQRNFYDPSSAPGKGVVWEWENDTGSWTPYDMEICVTIQN
AYEKQHPWLDLTSLGFCYLIDFNSMAQTNRQSQRKRRLRRRMDLAYPLTMGSIPKSQSWP
VGPSLGQPCSCQQCILVNSTRAASNAILASQRRKVYAGTNGASGTLTIVRQSNTFAGTTL
WSAASSVSGSSAKPEQVQPPGALSTFPRLPPPPAPTAVSGQNNLNRPGTQRTAIVSTRGS
IPPGVPALPVKNLTGSGPVHPALAAGMTGILMCAAGLPVCLTRAPKPILHPPPVNKSDLK
PVPGVNGIRRKMKKKQLRKGKNPEDVVRRYMEKVKVIPDEDCTICMERLATASGYDGVLG
HKGVKPELVGKLGKCGHMFHFLCLVAMYSNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEF
HVIPHCLPGYPECKTIRIVYDIPTGIQGPEHPNPGKKFSARGFPRHCYLPDNEKGRKVLK
LLIVAWDRRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELS
AQGVTEESLKD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccgtggggtacccctcacagaacctggcccgtgtggtggtctgggagtggctc
aacgagcatggcaggtggcgaccctacagcgctgcagtgtgccaccacatcgagaacgtc
ttgaaaggggacccgcggggcactgtcgtcctggggcaggtggacccccagctggctcct
tacatcatcgacctgcaatccatgcaccagttccgacaggacacaggaacaatgagacct
gtacaaagaaatttctatgacccctcatctgcccctgggaaaggtgttgtatgggagtgg
gaaaatgacactggctcttggacaccctacgacatggaaatctgtgtaacaattcagaat
gcatatgagaagcaacatccttggcttgaccttacctctctgggcttctgctacctcatt
gactttaacagcatggcgcagaccaaccgtcagagccagcgtaagaggaggttgcgtagg
agaatggacctagcctacccactcacgatgggctctatcccaaagtcacaatcctggcct
gttggccccagcttgggacagccctgttcttgccagcagtgcatcttggtgaatagtaca
cgagctgcctccaatgctattttggcctcccagcgccgcaaagtctatgctggcaccaat
ggggcctctgggactctgactattgtgcggcagagcaacacatttgcaggcacaaccctg
tggtctgctgcatcttctgtcagcggcagctcagccaaaccagagcaagtgcagccacca
ggagcgctctccaccttccccaggctcccacctccaccagcacctactgctgtctcaggc
cagaataatttaaaccgtccagggactcagcgcacagcaatagtcagtacacgaggctcc
attccacctggggtacctgcacttccagtgaaaaatttaactggatcaggaccggttcac
ccagctttggcagcagggatgactggcatactgatgtgtgctgctggcctcccagtgtgt
ctgactcgtgcccctaaacctattctgcaccctccacctgtcaataagagtgacttgaag
cctgtgcctggggtcaatggtattcgtcgcaaaatgaaaaagaagcagttaaggaaagga
aagaacccagaggatgttgtgcgaagatacatggagaaagtcaaggttattcctgatgag
gactgtaccatctgcatggaaagactagcaacagcatctggctatgatggtgttctcggc
cacaaaggggtgaaacccgagttggtaggcaaacttggcaaatgtggtcatatgttccac
ttcttgtgcctggtagccatgtacagtaatggaaacaaggatggcagtttgcagtgtcct
acttgtaaagctatctatggggagaagacgggtacacagccaccagggaagatggagttc
catgtaattcctcattgcctgcctggctatcctgaatgtaaaactattcgaattgtctat
gatattccaactggcatccagggaccagagcacccaaacccagggaagaagtttagtgct
cgaggattccctcgacattgctacttgccagataatgaaaaaggcagaaaggtcttaaaa
cttttgattgttgcgtgggatcgccggctgatttttaccattggcacatctaacacgaca
ggggagtcggacactgtggtctggaatgaaatccatcacaagacagagttcggctcaaac
ctgactggacacggatatccagaccccaactatctggacaatgtgcttaccgaactgtct
gcccagggagtgacagaagaaagtctgaaggactga
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