Polypterus senegalus (gray bichir): 120541024
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Entry
120541024 CDS
T08668
Name
(RefSeq) myoferlin-like isoform X1
KO
K22125
myoferlin
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120541024
Membrane trafficking [BR:
psex04131
]
Endosome - Lysosome transport
Others
Ferlins
120541024
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Motif
Other DBs
NCBI-GeneID:
120541024
NCBI-ProteinID:
XP_039628198
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Position
1:254748195..254900883
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AA seq
2097 aa
AA seq
DB search
MLKVVVESASNLPKTKLGKPDPVASIIFKDEKKKTKHIDSELNPVWNELLEFDLKGKPLD
SSAAIEVVVKDFETIGKDKLIGSATVSLKDLASGQVKSLPAKNLPLLNEKGQPSGGTVNI
VIGYEAPASANPTDSPDAGTAGTTATDGDEGGGDEDDADGGGGAGAGGRGGLGGMSGGQS
NTQLQRRLGKGKKNRRILSNKPQDFQIRVRVIEGRQIPGNNIKPVVKVNVCNQTHRTRIR
RGNNPFFDEVFFYNVNMMPSDLFDENITLRVYDSFSLRADSLMGEFKIDVGYVYDEPGHA
VLRKWLLLNDPEDATSGAKGYLKVSMFVVGTGDEPPVEQKTGDEDQEDIESNLLLPAGVT
LRWVTFTLKVYRAEDIPQMDDAFVQSVKELFGADSDKKNLVDPFVEVCFAGKKICTKIIE
QNANPEWNQAVNLQIKFPSMCDRIKLTVYDWDRLTRNDTVGTVYLSLSKIAFAGGESEDT
STGYGASTASEAVPGESEIGFLPAFGPCYINLYGSPREFTGFPDPYDELNFGKGEGVAYR
GRVLVELTTQIDAKAEKKIDEIPNDDILVTEKYQRRRKYSLCAVFHSANMLQEVGEPIQF
EVSIGNYGNKFDNTCKPLASTTQYTCAVFDGNFFYYLPWSNSKPVVVLTSYWEDIGHRMD
TVNIILNMADRLQANISTLKTAMAAKVQDTRLAEIWLKLINQLIEDLDANVLPELSDKPN
LTVLDIQIKKMRDSALRNIKDSAIHMREEATDVKATLNDIEDWLDRLQQLAEEPQNSMPD
VVIWMLRAEKRVAYARIPANQILYSTTSEQACGKYCGKSQTVFMKYPMDKNKGLKLPLQL
RVNMWLGLSTHEKKFNSYSEGTFTVFAEMYENQALVFGKWGTTGLMGRHKFSDVTGKIKL
KRESFMPPKGWEWEGDWFVDPEKNLLTEADAGHTEFTDEVYQNESRYPGGEWKPADEPYT
DVNGEKALAPGQYDCPAGWTWEDDWTFDINRAVDEKGWEYGITIPPDSKPKSWVPAEKMY
HTHRRKRLIRQRRREKQTSSTEKKPLLDDPEGWEYSSLIGWKFHSKMRGSDTVRRRRWRR
KMAPSDRLGASAIFKLEGALGTDMSEDSDGKDKTKESSTSLFGANTPSISNNYDRRFMYH
LRVYVHQARNLMPLDKESFSDPYAHVSFLHQSKTTEIINSTLNPQWDQTLIFDNIEIYGD
PQTIAQNPPNVVFELFDSDQVGKDEPLGRSMCSPLVKLNPETDVTPKLLWYPVIRAEKKH
GEILAAAELILKDKPDGSNLPIIPPKRGAKLYMVPQGIKPVVQLTAIEILTWGLRNMKNY
QLAAVSSPSLIVECGGEIVYSQVIKNIKKNPNFPGSVLFMKVPLPKEEIYTPPIVIKVID
HRPFGRKPIVGQCTIDSLEEYRCDPYTAKAEVAMTAKVALMSAPRDVVIDMEDKRPLLEA
QIYHLDSAPCDSEHFVYGMSTALSKLSTQQTAILKAELERETVDWWSKFYSSIGEIEKCG
QYIQKGYDTLKVYDDELEDITEFKGLTDFCDTFKLYRGKADEDEDDPSVVGEFKGSFSIY
PLSDDPSVPAPPRQFRELPESGPQECIVRIYIVRGIDLQPKDNNGLCDPYIKISLGKKVI
EDRDHYIPNTLNPMFGRMYELTCFIPQEKDLKISVYDYDMMTKDEKVGDTVIDLENRLLS
RFGSQCGLQQSYCISGLNQWRDQLKPSQILQNYARLKGQSPPVESDNGKMLSFGGRDYTL
DEFEANKILHEHLGPPNERLALHVLRTKRLVPEHVETRTLYSSFQPTLSQGKLQMWVDVF
PKSLGVPGPPFDITTRKPKKYVLRVIIWNTSDVILDETSITGEKMSDIYVKGWMPGIEEQ
KQKTDVHYRSLDGDGNFNWRFVFPFDYLPAEQLCLISKKEHFWSLDKTEFRIPPKLIVQV
WDNDKFSLDDYLGTLELDLRHLIPPAKTSATCNLKMIPETKGSTSSKPSHTSCLFSQKTV
RGWWPCVREDNGKHVLAGKVEMTLEILREKEVEERPAGKGRDEPNMNPKLDPPNRPDTSF
LWFTNPCKTMKFIVWRRFKWIFIGLIILLLVLLFLGILLYSLPNYISMKIVNPFPKR
NT seq
6294 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtggtagtagaatcggcaagcaaccttcctaaaactaaactcggaaaaccc
gatcctgtcgcttccatcattttcaaggatgaaaagaagaaaacaaagcacatcgacagt
gaactgaatcctgtctggaatgagctccttgaatttgatctgaagggaaaaccacttgat
tcatctgccgctattgaggtcgtggtgaaggattttgaaacaattggaaaagacaagctt
attggttcagcaacagtttctctgaaggatctggcaagtggtcaggtcaagtcccttcca
gctaaaaacttacctctcttaaatgaaaagggccaaccttctgggggaaccgtaaatata
gtgattggatatgaagcaccagcatcagctaacccaactgattctccagatgctggtaca
gctggcaccactgctactgatggggatgaaggaggaggtgatgaagatgatgctgatgga
ggaggaggagctggagctggaggtagaggtggcttgggtggcatgtctggaggtcagtca
aacacccaactgcaaaggaggcttggcaaaggcaagaaaaatcgtcgcatcctctccaac
aaacctcaggactttcagattcgtgttcgtgtcatcgaaggaaggcagattccaggaaac
aacattaaacctgtggtcaaggttaatgtgtgcaatcagacccacagaacaaggattcgg
agaggaaacaatccattctttgatgaggtgtttttctacaatgtcaatatgatgccatct
gacctttttgatgaaaacattactttaagggtttatgattcattttctctacgagctgac
agccttatgggcgaattcaagattgatgttggttatgtttatgatgaaccaggacatgct
gtcctcagaaagtggctgctgctaaatgatccagaggatgctacttcaggagcaaagggt
tacctcaaagtcagcatgtttgttgttgggactggagatgaaccaccggtggagcaaaag
actggggatgaagatcaggaggatattgagagtaatttgttgctgcctgctggtgtcaca
ttgagatgggtcacgtttactttgaaggtctacagagctgaagatattcctcagatggat
gatgcatttgtccaaagtgtaaaagaactatttggagctgatagtgataagaagaatctt
gtagatccatttgtggaagtttgctttgctggcaaaaaaatttgcactaaaataatagaa
cagaatgcaaacccagaatggaatcaagctgttaatctacaaattaagttcccatccatg
tgtgatcgtataaagctgactgtttatgactgggatcgtctgactaggaatgacactgtt
gggacagtctacctgagcctcagtaaaattgcttttgcaggtggagaaagtgaagacaca
tctacgggatatggggcttctacagcatctgaagctgttcctggtgagtctgaaatcgga
ttcttgccagcttttggtccttgttacattaacttgtatgggagtccacgagagttcact
ggatttcctgatccctatgatgagctcaattttggaaagggtgaaggtgttgcctatcga
ggaagagttcttgttgaactcacaactcagattgatgcaaaagctgaaaaaaaaattgat
gaaattccaaatgatgacattttagtgacagagaagtaccagcgtagacgcaagtacagc
ttgtgtgccgtgttccactctgctaacatgttgcaagaagttggtgagccgatacagttt
gaagtgagcataggcaattatggtaacaagtttgacaacacctgcaagccactggcctca
acaacgcagtacacatgtgctgtgtttgatggtaacttcttctattacttgccatggtcc
aactcaaagccagtagtagtgttaacctcttactgggaggatattggccacaggatggat
actgttaacatcatcctaaacatggcagatagactacaagcaaatatttcgaccctgaaa
actgcaatggctgcaaaagtgcaagacacacgtctggctgaaatatggctgaagctaatt
aatcagcttattgaagatctggatgcaaatgtgcttccggaattgagtgacaaacccaac
ctcaccgtccttgacattcaaattaaaaagatgcgtgattctgctcttagaaacattaaa
gattcagccattcatatgagagaagaggccactgacgtaaaagccactttaaatgacatt
gaagattggctggacagactgcagcagctagctgaagagccacaaaacagcatgcctgat
gtagtcatctggatgttgcgtgcagaaaaaagggtggcctatgcaaggattcctgctaat
cagatcttgtattctacaaccagtgaacaggcctgtggaaaatattgtggaaaatctcag
acggtattcatgaagtacccaatggataaaaacaaaggacttaagttgccactccagttg
cgggtcaatatgtggcttggattgtctacacatgaaaagaaatttaacagctattcagaa
ggaacctttactgtttttgcggaaatgtatgagaaccaagcccttgtctttggcaagtgg
ggcaccactggactaatgggacggcataaattttctgatgtcacagggaagatcaagtta
aagagagaaagctttatgcctcccaagggctgggaatgggaaggtgactggtttgtggac
ccggaaaaaaatttactaacagaagctgatgctggacatactgaatttactgatgaggtt
taccagaatgagtctagatacccaggtggtgaatggaagcctgcagatgagccctacact
gatgtgaatggtgagaaggcattagcacctgggcagtatgattgccctgccggctggacg
tgggaagatgactggacatttgacattaacagagctgttgatgaaaaaggatgggaatat
ggaatcactatcccacctgattccaagccaaaatcatgggtaccagctgaaaagatgtac
catacccaccgacggaagagactcatccggcaacggcgaagggaaaaacagacctcatct
acagagaaaaaaccactacttgatgaccctgagggctgggaatattcatctcttattggc
tggaaatttcacagcaaaatgcgaggttcagacacagtccgtcgcagacgctggagaagg
aaaatggctccttctgacaggcttggtgcatcagctatattcaaacttgaaggggctctg
ggtactgacatgtcagaggactccgatggaaaagataagacgaaagagagtagcacatca
ttgtttggtgccaatactccaagtatttccaataattatgacagacgctttatgtatcat
cttcgagtgtatgttcaccaggcacgaaatcttatgcctttggataaagaaagtttttct
gatccttatgctcatgtgtcattccttcatcagagcaaaactacagagataattaattct
acattaaacccacaatgggaccagaccctaatttttgacaatattgaaatctacggagat
ccacagaccattgctcaaaacccgccaaatgttgtctttgagctatttgattctgatcaa
gtgggaaaagatgagcctttgggtcgaagcatgtgctcacctctagtaaaactcaatcct
gaaaccgatgtgacaccaaagttgctctggtaccctgtaattcgagcagaaaagaaacat
ggagaaattctggcagcagcagagctcatcttaaaagataagccagatggatccaatcta
cctattattccaccaaaacgaggagcaaaactctacatggtccctcaaggaatcaagcca
gttgttcagcttacagcaatagagattctgacttggggtttgagaaacatgaaaaactac
cagctagctgctgtctcatcaccaagtctcattgtagagtgtggaggagaaattgtctat
tcacaggtcatcaaaaatattaagaagaatcccaactttcctggatctgttttgttcatg
aaagtgcctctcccaaaagaggaaatttacactccacccatagtaataaaagtgattgat
caccgaccatttggaaggaaaccaattgtggggcagtgtacaatagactctctagaagaa
tatcgttgtgatccttacactgccaaggctgaagttgcaatgactgcaaaagttgccttg
atgtctgcccccagagatgttgtcattgacatggaggataagaggcccttgcttgaagcc
cagatttaccatctggattctgcaccatgtgactcggagcactttgtatacggtatgtca
acagctctcagcaaactgagcactcagcaaactgcgatacttaaagcggaattggaaaga
gaaacagttgattggtggagcaaattttactcctcaattggggaaattgaaaaatgtgga
cagtacatccagaagggttatgacacactgaaggtctatgatgatgagctggaagatatt
acagaattcaaggggctaactgacttttgtgataccttcaaactctatagaggtaaagct
gatgaagacgaggatgatccatcagtcgtgggagaatttaagggttcattcagtatatac
cccttatcagatgaccctagtgttccagcaccccctcgccaattcagagagttacctgag
agcggaccgcaggaatgtattgtcaggatctacattgtccgaggcatagatctacagcct
aaagacaacaatggtctgtgtgacccttacatcaaaataagtttgggtaagaaggtgata
gaagatagagatcattacattccaaatacattaaatcccatgtttggaagaatgtatgaa
cttacttgcttcatcccacaagagaaagacttaaagatttcagtttatgactatgacatg
atgaccaaagatgagaaagttggtgacaccgtgatagatttggagaatcgtctgctttcc
cgctttgggtcacagtgtggcttgcagcaaagttattgcatctctgggttgaaccagtgg
agggaccaactcaaaccatcccagattttacagaattatgcccggctaaaaggccaatct
cctccagttgaatctgacaatggtaaaatgttgtcttttggaggacgtgactacacactg
gatgagtttgaagccaataaaattcttcacgaacacctgggcccaccaaatgaacgtctt
gccctccatgtcctgagaacaaagcggctggttcctgagcatgttgagaccaggacactt
tatagctcattccaacctacactgtcccaaggaaaacttcagatgtgggttgacgtgttc
cccaagagccttggagttcctggccctccattcgatatcactacacgaaaacctaaaaaa
tatgtcctacgtgttattatttggaacacatcagatgttattctggatgaaaccagcatt
actggagaaaaaatgagtgacatttatgtgaaaggatggatgccaggcattgaggagcaa
aaacagaaaactgatgttcattaccggtcacttgatggcgatggtaatttcaactggaga
tttgttttccccttcgactacctgccagctgaacagctatgtctcatttctaaaaaagaa
cacttctggagtcttgacaagactgaatttaggatacctccaaagcttatcgtacaagtc
tgggacaatgacaagttctcattggatgattacttagggacactggagttggacttacgc
cacttaataccccctgccaaaacctcagcaacatgtaatttgaaaatgattccagagacc
aaaggctctacctcttcaaaaccttcgcacacatcatgtctgttttcacagaaaactgta
aggggctggtggccttgtgtcagagaggacaatggcaaacacgttttagctggaaaagtt
gagatgaccctggaaatcctcagagagaaagaggttgaagaaagacccgctgggaaaggg
agagacgaacccaacatgaatccaaagttggacccaccaaatcggccagacacatccttt
ttgtggttcacaaatccatgcaagacaatgaaattcattgtgtggcgtagattcaagtgg
atcttcattggccttattattttgctcctagtattgctcttcttaggaatattattgtac
tctctaccaaactacatatccatgaaaattgtaaaccccttccctaagagataa
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