Polypterus senegalus (gray bichir): 120541105
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Entry
120541105 CDS
T08668
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00310
Lysine degradation
psex00514
Other types of O-glycan biosynthesis
psex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120541105 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120541105 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psex01003
]
120541105 (colgalt1a)
Enzymes [BR:
psex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120541105 (colgalt1a)
Glycosyltransferases [BR:
psex01003
]
O-Glycan biosynthesis
O-linked Gal type
120541105 (colgalt1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
120541105
NCBI-ProteinID:
XP_039628353
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All DBs
Position
12:77088460..77100585
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AA seq
612 aa
AA seq
DB search
MAPLERLVLVLSPLLLLVLYAPPSRCYFPEERWSPESPLLAPRVVLALICRNSAHSLPHV
LGALDRLDYPKERTALWVATDHNVDNTTAVLREWLINVQKFYHYVEWRPQEEPRGFDDEV
GPKHWTAERYEHVMKLRQAALTAAREMWADYILYMDCDNLLTDPEVLWKLMAEDKTIVAP
MLESRAAYSNFWCGMTAQGYYKRTPAYMPMRKHERQGCFAVPMVHSTFLIDLRKEASQDL
AFYPPHPDYTWSFDDIIVFAFSARMADVQMFLCNKETYGFFPVPLRAHSSLLDETESFLH
TVLEVMVNQPPAEPSSFLSVAQKHPDKMAFDEVFMINLKRRTDRRERMLRTLYEQEIACK
VVDAVDGRALNVSQIDAMGIHMLPGYQDPYHGRPLTRGELGCFLSHYNIWKEVVDRGLET
SLVFEDDLRFEVFFKRRLQNLMYEVQTEGLDWDLIYIGRKRMQVDHPEKAVPNVHNLVEA
DYSYWTLAYAISLQGAQKLLKAEPLGKILPVDEFLPVMYNKHPVSDYMEHFETRDLLAFS
AEPLLVYPTHYTGDSGYISDTETSTVWDNEGLKTDWDRTKSRKTQEQAELSSEAQNSDVL
QSPLDSTARDEL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccctcgagcggctcgttctcgtactttcgccgctgcttctgcttgttctctac
gccccgccatcccgctgctacttcccagaagagcgctggagccccgagtcgcctctgctc
gctccgcgggtcgtcctcgccctcatctgccgcaactcggctcactcgctgccccacgtc
ctgggcgccctcgaccggctcgactaccccaaggagcgcaccgccctgtgggtggccacc
gaccacaatgtggacaacaccaccgccgtgctgcgcgagtggctcatcaacgtgcagaag
ttctaccattacgtggagtggaggcctcaggaggagccgagaggattcgatgatgaggtg
ggccccaagcactggaccgccgagcgctatgagcatgtgatgaagctgcgccaggccgcc
ttgactgctgccagggagatgtgggcagactacattctgtacatggactgtgacaacctg
ctgacggaccccgaggtcctgtggaagctcatggccgaggacaagaccatcgtggccccc
atgctggagtctcgagctgcctattccaatttttggtgtggcatgaccgctcagggttat
tacaaacgaacgccagcctacatgccaatgagaaagcacgaacggcagggttgctttgca
gttcccatggtgcactccaccttcctgatcgacctgagaaaggaggcgtcccaggatctc
gccttctacccgcctcacccagactacacctggtcctttgatgacatcatcgtcttcgcc
ttctctgcccgcatggctgatgtgcagatgttcctgtgtaacaaggagacctacggcttc
ttcccggtgcccttgcgcgctcacagcagtctgctggacgagaccgaaagcttcctgcac
acggtgctcgaggtcatggtgaatcagccgcctgcggagccctccagctttctctcggtt
gcccagaagcatcccgataagatggccttcgatgaggtgttcatgattaacctgaagcgg
cgcacggaccgccgggagcgaatgctacgcacgctctacgaacaggagatcgcttgcaaa
gttgtggacgccgtggacgggagggctctgaatgtcagtcagattgacgccatgggtatt
cacatgctgcccggctaccaggacccctaccacgggcgcccactgaccaggggagagctg
ggctgcttcctgtcccactacaacatctggaaggaggttgtggacaggggcctggagacg
tccttggtgttcgaggacgacctgcgctttgaggtcttcttcaagaggcgcctgcagaac
ctcatgtacgaggtgcagaccgaggggctcgactgggacctcatatacatcggccgcaag
aggatgcaagtggaccacccagagaaggcggtgcccaacgtccataacctggtggaggct
gactactcgtactggaccttggcatatgccatctccttgcagggggcacagaagctgctg
aaggcggagcctcttggtaaaatcctgcccgttgatgagttcctgccagtgatgtacaac
aagcacccggtgtccgactacatggagcactttgagacgcgggacctgctggcgttttcg
gccgagcccctcctggtctacccgacgcactacacgggcgacagcggctacatcagcgac
acggagacctccaccgtctgggacaacgaggggctgaagacggactgggaccgcaccaag
tcgcgcaagactcaggagcaggcggagctgagcagcgaggcgcagaattcggacgtcctg
cagtcgccactggacagcacggcgcgtgacgagttgtga
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