Polypterus senegalus (gray bichir): 120541152
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Entry
120541152 CDS
T08668
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120541152 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psex01007
]
120541152 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120541152 (farsa)
Enzymes [BR:
psex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
120541152 (farsa)
Amino acid related enzymes [BR:
psex01007
]
Aminoacyl-tRNA synthetase
Class II (U)
120541152 (farsa)
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120541152 (farsa)
Prokaryotic type
120541152 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
120541152
NCBI-ProteinID:
XP_039628442
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All DBs
Position
12:79301659..79337501
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AA seq
497 aa
AA seq
DB search
MADGVVVEPLLQLLEKADGGLDSLQVATGLRVDHQLVVGAVKSLQSLGEVISAEQRSSKR
WELSCEGKEIAEQGSHEARVFNSVPPEGLAQSQLMNLPSGKVGFSKAMSNKWIRLDKNAE
GGPRVYRVVESIEDLVQKKLLLAQQGQTDSLEEKDKNELKKRKLLNEVNVKSYWITKGSA
FSTSVTKQETDLTPEMISSGSWHDKKFKPYNFEALGIIPDCGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLSDPACANHFPEDYLERVKRVH
SEGGYGSQGYKYDWKIEEAAKNILRTHTTAVSARMLYRLAQQEEFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGILHQFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLQKWVEVGNSGVFRPEMLLPMGLPEGVSVIAWGLSLERPTMIKYGINNIRELVGH
KVHLQMVYDSPVCRLDC
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtgtagttgtggagcctttgcttcagttactggagaaggcggatggcggt
ctggacagtctgcaagtggcaacgggtttgcgagtggatcaccagctggtggtcggtgct
gttaagagcctccaatccctgggagaggtgatctccgccgaacagcgctcctcaaaacga
tgggaactgagctgtgaggggaaggaaattgcagagcagggtagccatgaggcccgtgtt
ttcaacagcgtgccgccggagggactggcccagagccagctcatgaaccttcccagtggt
aaagtgggcttcagcaaggctatgtcaaacaaatggatccgactggacaaaaatgctgaa
ggaggccctcgtgtctacagggtggtggaaagtatcgaggacctggtgcaaaaaaagctg
ttacttgctcagcaaggacaaaccgacagtttagaagagaaagataaaaacgagctgaag
aagagaaaactcctcaatgaagtgaacgtcaagtcttactggatcaccaagggcagcgcc
tttagcacttcggtcaccaagcaggagacggacctgactcccgaaatgatcagcagtggt
tcctggcatgacaaaaagttcaagccctacaactttgaggcacttggcatcattccagac
tgtggccacctgcaccccctgatgaaggtgcgcacccaattcaggcagatcttccttgag
atgggcttcacagaaatgccaactaacaacttcatcgaaagctccttctggaactttgac
gccctttttcagccacagcaacacccagccagagaccagcatgacaccttcttcctgtca
gaccctgcttgtgccaatcacttcccagaagactacctggagagagttaagagggtccac
tcggagggaggctacggctcacaggggtacaagtatgactggaagattgaggaggcagcg
aagaatatcctgaggactcacaccaccgctgtgagcgcaaggatgttgtaccgcctcgct
cagcaggaggagttcaccccagttaagtacttctcgatagaccgagtgttccgcaatgag
accctggatgccactcacctagcagagttccatcagatcgagggagtggtggccgactac
ggactgactttaggtgatctgatgggcatcttacaccagttcttcaccaagcttggaatc
acaaaactacgcttcaagccagcttataacccgtacaccgagcccagcatggaggtgttc
agctaccatgaaggcctccaaaagtgggtcgaagtgggaaattccggagtcttccgtcca
gagatgcttctgccaatgggccttccagaaggggtctcggtgatcgcctggggactgtcg
ctcgagcggccaacaatgatcaagtatggcatcaacaacatcagggagctggtgggtcac
aaggtccacctgcagatggtctacgacagcccggtgtgccgactcgactgctag
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